BIOCOMP 2007:
Las Vegas, Nevada, USA
Hamid R. Arabnia, Mary Qu Yang, Jack Y. Yang (Eds.):
International Conference on Bioinformatics & Computational Biology, BIOCOMP 2007, Volume I, June 25-28, 2007, Las Vegas Nevada, USA.
CSREA Press 2007, ISBN 1-60132-040-X 
Sequence and Structure Alignment of Macro Molecules
Biomolecular Pathways and System Biology
- Amitava Karmaker, Stephen Harris, Stephen Kwek:
Identification of cis-Regulatory Elements from Cross-Genome Comparison and Gene Expression Profile Analysis.
31-36
- Rui Chang, Martin Stetter:
A Knowledge-based Dynamic Bayesian Framework Towards Molecular Network Modeling and Quantitative Prediction.
37-43
- Jacek P. Kukluk, Chang Hun You, Lawrence B. Holder, Diane J. Cook:
Learning Node Replacement Graph Grammars in Metabolic Pathways.
44-50
- Hao Xiong, Yoonsuck Choe:
Constrained Estimation of Genetic Networks.
51-57
- Thierry Antoine-Santoni, Fabrice Bernardi, François Giamarchi:
General Methodology for Metabolic Pathways Modeling and Simulation Using Discrete Event Approach. Example on Glycolysis of Yeast.
58-64
- Shih-Wu Cheng, Hsiang-Yuan Yeh, Yu-Chun Lin, Shih-Fang Lin, Von-Wun Soo:
Inferring Gene Regulatory Networks from Microarray Data Based on Transcription Factor Analysis and Conditional Independency.
65-71
- Hanuman Thota, Nageswara rao Kunjam, Suresh Babu Changalasetty, Allam Appa Rao, Ramachandra Sridhar Gumpeny, Undurti N. Das, Reddi Kirankumar, T. K. Rama Krishna Rao:
Aldose Reductase and Nitric Oxide Synthase Role in Diabetic Retinopathy: A Bioinformatics Study.
72-75
- Ines Hamdi, Imed Riadh Farah, Mohamed Ben Ahmed:
Analyzing and Dynamic Modeling of Molecular Interactions Networks Based on Multi-agent Systems.
76-82
- Nicholas Xue Wei Tan, Felicia Soo Lee Ng, Vivek Tanavde:
Towards a Serum-free Culture Medium: Identifying Human Growth Receptors and Signaling Pathways that Regulate Cell Proliferation in Human Mesenchymal Stem Cells (MSCs).
83-90
Phylogenetic Reconstruction and Molecular Evolution
Microarray Data Analysis and Gene Expression
- Jiajun Gu, Jun S. Liu:
Bayesian Biclustering of Microarray Data.
113-120
- Marie-Michèle Cordonnier-Pratt, Virgil Johnson, Dmitri Kolychev, Chun Liang, Junfeng Qu, Feng Sun, Zheng Xia, Lee H. Pratt:
MIAME-Compliant Microarray Data Integrated System.
121-126
- Liviu Badea:
Combining Gene Expression and Transcription Factor Regulation Data using Simultaneous Nonnegative Matrix Factorization.
127-131
- Chen Wang, Jianhua Xuan, Ting Gong, Robert Clarke, Eric P. Hoffman, Yue Joseph Wang:
Stability-Based Dimension Estimation of ICA with Application to Microarray Data Analysis.
132-138
- Kumar Abhishek, Harish Karnick:
GO Based Inference of Gene Regulatory Networks from Gene Expression Data.
139-145
- Humberto Ortiz-Zuazaga, Sandra Peña de Ortiz, Oscar Moreno de Ayala:
Error Correction and Clustering Gene Expression Data Using Majority Logic Decoding.
146-152
- Thomas K. F. Wong, Tak Wah Lam, W. L. Yang, Siu-Ming Yiu:
Finding Alternative Splicing Patterns with Strong Support From Expressed Sequences.
153-158
- Huan Wang, Nam-Hai Chua, Xiu-Jie Wang:
Prediction of trans-antisense Transcripts in Arabidopsis thaliana.
159-162
Gene Identification and Clustering
- Yijun Sun, Fanhong Yu, Li Liu, William G. Farmerie:
Estimating Microbial Population Densities Based on Genomic Signatures.
163-168
- Avinash Kewalramani, Riley Arnaudville, Cliff Han, Olga Chertkov, Thomas S. Brettin:
A novel approach to high throughput microbial genome finishing: Incorporation of 454 sequence data for gap closure in low quality Sanger data.
169-174
- Gwo-Liang Chen:
PRAP: An Automated de novo Repeat Finder Pipeline Parkoyotic Genomes.
175-180
- Meena K. Sakharkar, Kishore R. Sakharkar:
Targetability and Orthology of Human Disease Genes.
181-187
- Waibhav Tembe, Nils Homer, Sotiris Mitropanopoulos, Mitchell Storey, Szabolcs Szelinger, Marcel Brun, Matthew J. Huentelman, Edward Suh, Dietrich A. Stephan, James Lowey, John V. Pearson, David W. Craig:
Analysis Software for High-density Pooled Genotyping Data.
188-194
- Cole Harris, Noushin Ghaffari:
Biomarker Discovery Across Annotated and Unannotated Microarray Datasets Using Semi-Supervised Learning.
195-200
- Tin-Chun Chu, Lee H. Lee, John J. Gaynor, Quinn C. Vega, Bonnie K. Lustigman, Shankar Srinivasan:
Identification of the Synechococcus sp. IU 625 Metallothionein Gene and its Evolutionary Relationship to the Metallothionein Gene of Other Cyanobacteria.
201-207
- Yunkai Liu, Sujuan Ye, Asai Asaithambi:
A Workflow to Discover Regulatory Motifs with Positional Bias in Human Promoters.
208-213
- Amitava Karmaker, Stephen Kwek:
An Approach for Analyzing DNA Copy Number Aberrations in Genome Using aCGH Profiles.
214-217
- Mary Qu Yang, Laura Elnitski:
Orthology and Multiple Class Prediction of Functional Elements in the Human Genome.
218-228
Medical Diagnostic and Software Tools
- Yijun Sun, Steve Goodison:
Predicting Breast Cancer Metastasis by Integrating Both Clinical and Genetic Markers.
229-235
- Tian Xue, Boyu Yang, Rebecca Will, Bruce Sharp, Ron Kenyon, Oswald Crasta, Bruno W. S. Sobral:
A Generalized Framework for Pathosystems Informatics & Bioinformatics Web Services.
236-242
- Rahul Pandhi, Sumit Khurana, Rajesh Rohilla, Pradeep Khanna:
Intelligent Assistive Feeding Device for Phisically Handicapped.
243-247
- Siling Wang, Yuhang Wang, Luc Girard, Young Kim, Jonathan R. Pollack, John D. Minna:
An Interval Tree Based Feature Reduction Method For Cancer Classification Using High-Throughput DNA Copy Number Data.
248-255
- Ghasem Zaefarian, Jawed I. A. Siddiqi, Babak Akhgar, Alicja Gruzdz, Aleksandra Ihnatowicz:
Requirements and System Architecture for a Decision Support System for the treatment of Colorectal Cancer.
256-262
- Babak Akhgar, Jawed I. A. Siddiqi, Alicja Gruzdz, Aleksandra Ihnatowicz, Ghasem Zaefarian:
An Ontologically Driven Decision Support System for Colorectal Caner Treatment: Data Relevance and Model Integration.
263-268
- Alper Kursat Uysal, Ali Gunes, Ahmet Babanli:
Analysis of Headache Disease Data By Neural Networks.
269-274
- Jyung Hyun Lee, Yeon Kwan Moon, Sang Hyo Woo, Chang Wook Kim, Hee Joon Park, Jong Sik Jin, Chul-Ho Won, Hyun Chul Choi, Yoon Nyun Kim, Jin-Ho Cho:
Design & Implementation of CPLD Controller for Bi-directional VGA Capsule Endoscop.
275-281
- Jack Y. Yang, Mary Qu Yang:
The 2007 World Congress in Computer Science, Computer Engineering, and Applied Computing Invited Banquet Keynote Lecture: Using Bioinformatics and Machine Learning to Predict Potential Malignancies.
282-288
Application of Engineering Techniques and Mathematics in Medicine
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