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ORCIDSWAT4LS 2009: Amsterdam, The Netherlands
- M. Scott Marshall, Albert Burger, Paolo Romano, Adrian Paschke, Andrea Splendiani:
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, Amsterdam, The Netherlands, November 20, 2009. CEUR Workshop Proceedings 559, CEUR-WS.org 2010
Papers
- Matthias Löbe, Magnus Knuth, Roland Mücke:
TIM: A Semantic Web Application for the Specification of Metadata Items in Clinical Research. - Sonja Zillner:
Towards the Ontology-based Classification of Lymphoma Patients using Semantic Image Annotations. - Egon L. Willighagen, Jarl E. S. Wikberg:
Linking Open Drug Data to Cheminformatics and Proteochemometrics. - Hammad Afzal, James M. Eales, Robert Stevens, Goran Nenadic:
Mining Semantic Networks of Bioinformatics e-Resources from the Literature. - Anna-Lena Lamprecht, Stefan Naujokat, Tiziana Margaria, Bernhard Steffen:
Semantics-Based Composition of EMBOSS Services with Bio-jETI. - Syed Hamid Tirmizi, Stuart Aitken, Dilvan A. Moreira, Chris Mungall, Juan F. Sequeda, Nigam H. Shah, Daniel P. Miranker:
OBO & OWL: Roundtrip Ontology Transformations.
Highlight Posters
- Jerven T. Bolleman, Thomas Kappler:
Weekend Triple Billionaire. - Ernesto Jiménez-Ruiz, Bernardo Cuenca Grau, Rafael Berlanga Llavori, Ian Horrocks:
Towards a Logic-based Assessment of the compatibility of UMLS sources. - Simon N. Twigger, Joey Geiger, Jennifer R. Smith:
Using the NCBO Web Services for Concept Recognition and Ontology Annotation of Expression Datasets.
Demos
- Stephen D. Larson, Sarah Maynard, Fahim T. Imam, Maryann E. Martone:
NeuroLex.org - A semantic wiki for neuroinformatics based on the NIF Standard Ontology. - Marco Brandizi, Michaela Gündel, Ciro Scognamiglio, Andrea Splendiani:
DC-THERA Directory, a Knowledge Management System for the support of the European Dendritic Cell Immunology Community. - Ernesto Jiménez-Ruiz, Bernardo Cuenca Grau, Ian Horrocks, Rafael Berlanga Llavori:
ContentCVS: A CVS-based Collaborative ONTology ENgineering Tool. - Patrick Lambrix, Qiang Liu, He Tan:
A system for repairing missing is-a structure in ontologies. - Amalia Kallergi, Fons J. Verbeek:
Onto-Frogger: Playing with Semantic Structure.
Posters
- Nico Adams, Paula de Matos, Adriano Dekker, Marcus Ennis, Janna Hastings, Kenneth Haug, Duncan Hull, Zara Josephs, Pablo A. Moreno, Steve Turner, Christoph Steinbeck:
Semantic access to chemistry data with the ChEBI ontology and web services. - Yu Lin, Hiroshi Tarui, Peter Simons:
From Ontology for Genetic Interval (OGI) to Sequence Assembly - Ontology applying to next generation sequencing. - Catherine Canevet, Andrea Splendiani, Shao-Chih Kuo, Robert Stevens, Phillip W. Lord, Christopher J. Rawlings:
Ondex: data integration and visualisation for the Semantic Web. - José Antonio Miñarro-Giménez, Marisa Madrid, Jesualdo Tomás Fernández-Breis:
Semantic integration and exploitation of orthology information and genetic disorders. - Amine Kerzazi, Ismael Navas-Delgado, José Francisco Aldana Montes:
Towards an Ontology-based Mediation Framework for Integrating Biological Data. - Julia Dmitrieva, Fons J. Verbeek:
Integration of information from different ontologies. - Joris Slob, Amalia Kallergi, Fons J. Verbeek:
Observations on Semantic Annotation of Microscope Images for Life Sciences. - Alex Logvynovskiy, Mohammad Dastbaz, Chris Imafidon:
Semantic Bookmarking for Reference Management. - Pietro Hiram Guzzi, Mario Cannataro:
Using ontologies for querying and analysing protein-protein interaction data.
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