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ORCIDDatabase - The Journal of Biological Databases and Curation, Volume 2009
Volume 2009, 2009
- David Landsman
, Robert Gentleman, Janet Kelso, B. F. Francis Ouellette:
DATABASE: A new forum for biological databases and curation.
- Olivier Arnaiz, Agata Malinowska, Catherine Klotz, Linda Sperling, Michal Dadlez, France Koll, Jean Cohen:
Cildb: a knowledgebase for centrosomes and cilia. - Taner Z. Sen, Carson M. Andorf, Mary L. Schaeffer, Lisa C. Harper, Michael E. Sparks, Jon Duvick, Volker P. Brendel, Ethalinda K. S. Cannon, Darwin A. Campbell, Carolyn J. Lawrence:
MaizeGDB becomes 'sequence-centric'. - Rezarta Islamaj Dogan, G. Craig Murray, Aurélie Névéol, Zhiyong Lu:
Understanding PubMed® user search behavior through log analysis. - David Vallenet, Stefan Engelen, Damien Mornico, Stéphane Cruveiller, Ludovic Fleury, Aurélie Lajus, Zoé Rouy, David Roche, Gregory Salvignol, Claude Scarpelli, Claudine Médigue:
MicroScope: a platform for microbial genome annotation and comparative genomics. - Karen G. Dowell, Monica S. McAndrews-Hill, David P. Hill, Harold J. Drabkin, Judith A. Blake:
Integrating text mining into the MGI biocuration workflow. - Neil D. Rawlings:
A large and accurate collection of peptidase cleavages in the MEROPS database. - Christina Chandras, Thomas Weaver, Michael Zouberakis, Damian Smedley, Klaus Schughart, Nadia A. Rosenthal, John M. Hancock, George Kollias, Paul N. Schofield, Vassilis Aidinis:
Models for financial sustainability of biological databases and resources. - Pascale Gaudet, Lydie Lane, Petra Fey, Alan J. Bridge, Sylvain Poux, Andrea H. Auchincloss, Kristian B. Axelsen, Silvia Braconi-Quintaje, Emmanuel Boutet, P. Brown, Elisabeth Coudert, Ruchira S. Datta, W. C. de Lima, Tulio de Oliveira, Severine Duvaud, N. Farriol-Mathis, Serenella Ferro-Rojas, Marc Feuermann, Alain Gateau, Ursula Hinz, Chantal Hulo, Janet James, Silvia Jimenez, Florence Jungo, Guillaume Keller, Phillippe Lemercier, Damien Lieberherr, Madelaine Moinat, Anastasia N. Nikolskaya, Ivo Pedruzzi, Catherine Rivoire, Bernd Roechert, Michel Schneider, E. Stanley, Michael Tognolli, Kimmen Sjölander, Lydie Bougueleret, Rex L. Chisholm, Amos Bairoch:
Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase. - Lope A. Flórez, Sebastian F. Roppel, Arne G. Schmeisky, Christoph R. Lammers, Jörg Stülke:
A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki. - Nils Gehlenborg, Daehee Hwang, Inyoul Y. Lee, Hyuntae Yoo, David Baxter, Brianne Petritis, Rose Pitstick, Bruz Marzolf, Stephen J. DeArmond, George Carlson, Leroy Hood:
The Prion Disease Database: a comprehensive transcriptome resource for systems biology research in prion diseases. - Gregory Vey:
Differential direct coding: a compression algorithm for nucleotide sequence data. - Alessandro Laganà, Stefano Forte, A. Giudice, M. R. Arena, Piera Laura Puglisi, Rosalba Giugno, Alfredo Pulvirenti, Dennis E. Shasha, Alfredo Ferro:
miRò: a miRNA knowledge base. - Lothar Wissler, Emanuela Dattolo, Andrew D. Moore, Thorsten B. Reusch, Jeanine L. Olsen, M. Migliaccio, Erich Bornberg-Bauer, Gabriele Procaccini:
Dr. Zompo: an online data repository for Zostera marina and Posidonia oceanica ESTs. - Francesco Chiani, Camilla Iannone, Rodolfo Negri, Daniele Paoletti, Mattia D'Antonio, Paolo D'Onorio De Meo, Tiziana Castrignanò:
Radiation Genes: a database devoted to microarrays screenings revealing transcriptome alterations induced by ionizing radiation in mammalian cells. - Hui Yu, Fudong Yu, Guoqing Zhang, Xiang Shen, Yun-Qin Chen, Yuan-Yuan Li, Yi-Xue Li:
DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels. - Junjian Ni, Anuradha Pujar, Ken Youens-Clark, Immanuel Yap, Pankaj Jaiswal, Isaak Y. Tecle, Chih-Wei Tung, Liya Ren, William Spooner, Xuehong Wei, Shuly Avraham, Doreen Ware, Lincoln Stein, Susan McCouch:
Gramene QTL database: development, content and applications. - R. Travis Moreland, Joseph F. Ryan, Christopher Pan, Andreas D. Baxevanis:
The Homeodomain Resource: a comprehensive collection of sequence, structure, interaction, genomic and functional information on the homeodomain protein family. - Shuoyong Shi, Jimin Pei, Ruslan Sadreyev, Lisa N. Kinch, Indraneel Majumdar, Jing Tong, Hua Cheng, Bong-Hyun Kim, Nick V. Grishin:
Analysis of CASP8 targets, predictions and assessment methods. - Maria C. Costanzo, Marek S. Skrzypek, Robert S. Nash, Edith D. Wong, Gail Binkley, Stacia R. Engel, Benjamin C. Hitz, Eurie L. Hong, J. Michael Cherry:
New mutant phenotype data curation system in the Saccharomyces Genome Database.
- Rachael P. Huntley, David Binns, Emily Dimmer, Daniel Barrell, Claire O'Donovan, Rolf Apweiler:
QuickGO: a user tutorial for the web-based Gene Ontology browser.
- Willy Valdivia Granda, Francis Larson:
ORION-VIRCAT: a tool for mapping ICTV and NCBI taxonomies.
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