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ORCIDJournal of Computational Biology, Volume 6
Volume 6, Number 1, Spring 1999
- Bonnie Berger, G. W. Hoest, J. R. Paulson, Peter W. Shor:
On the Structure of the Scaffolding Core of Bacteriophage T4. 1-12 - Ashwin Nayak, Alistair Sinclair, Uri Zwick:
Spatial Codes and the Hardness of String Folding Problems. 13-36 - Richard Desper, Feng Jiang, Olli-P. Kallioniemi
, Holger Moch, Christos H. Papadimitriou, Alejandro A. Schäffer:
Inferring Tree Models for Oncogenesis from Comparative Genome Hybridization Data. 37-51 - Leonard M. Adleman, Paul W. K. Rothemund, Sam T. Roweis, Erik Winfree:
On Applying Molecular Computation to the Data Encryption Standard. 53-63 - Sam T. Roweis, Erik Winfree:
On the Reduction of Errors in DNA Computation. 65-75 - Fengzhu Sun:
Modeling DNA Shuffling. 77-90 - Richard Mott, R. Tribe:
Approximate Statistics of Gapped Alignments. 91-112 - Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Wojciech T. Markiewicz, Jan Weglarz:
DNA Sequencing With Positive and Negative Errors. 113-123 - David Loewenstern, Peter N. Yianilos:
Significantly Lower Entropy Estimates for Natural DNA Sequences. 125-142
Volume 6, Number 2, Summer 1999
- Sorin Istrail, Russell Schwartz, Jonathan A. King:
Lattice Simulations of Aggregation Funnels for Protein Folding. 143-162 - Sun Kim, Alberto Maria Segre:
AMASS: A Structured Pattern Matching Approach to Shotgun Sequence Assembly. 163-186 - Daniel P. Fasulo, Tao Jiang, Richard M. Karp, Reuben J. Settergren, Edward C. Thayer:
An Algorithmic Approach to Multiple Complete Digest Mapping. 187-207 - Jason Tsong-Li Wang, Steve Rozen, Bruce A. Shapiro, Dennis E. Shasha, Zhiyuan Wang, Maisheng Yin:
New Techniques for DNA Sequence Classification. 209-218 - Thomas D. Wu, Craig G. Nevill-Manning, Douglas L. Brutlag:
Minimal-Risk Scoring Matrices for Sequence Analysis. 219-235 - Guy Mayraz, Ron Shamir:
Construction of Physical Maps from Oligonucleotide Fingerprints Data. 237-252 - Lihua Yu, Temple F. Smith:
Positional Statistical Significance in Sequence Alignment. 253-259 - Gary A. Churchill, Betty Lazareva:
Bayesian Restoration of a Hidden Markov Chain with Applications to DNA Sequencing. 261-277
Volume 6, Numbers 3/4, Fall/Winter 1999
- Sorin Istrail:
Preface: Special RECOMB'99 Issue. 279 - Amir Ben-Dor, Ron Shamir, Zohar Yakhini:
Clustering Gene Expression Patterns. 281-297 - Jadwiga R. Bienkowska, Robert G. Rogers, Temple F. Smith:
Performance of Threading Scoring Functions Designed Using New Optimization Method. 299-311 - L. Paul Chew, Daniel P. Huttenlocher, Klara Kedem, Jon M. Kleinberg:
Fast Detection of Common Geometric Substructure in Proteins. 313-325 - Vlado Dancík, Theresa A. Addona, Karl R. Clauser, James E. Vath, Pavel A. Pevzner:
De Novo Peptide Sequencing via Tandem Mass Spectrometry. 327-342 - Christian V. Forst, Klaus Schulten:
Evolution of Metabolisms: A New Method for the Comparison of Metabolic Pathways Using Genomics Information. 343-360 - Alan M. Frieze, Franco P. Preparata, Eli Upfal:
Optimal Reconstruction of a Sequence from its Probes. 361-368 - Daniel H. Huson, Scott Nettles, Tandy J. Warnow:
Disk-Covering, a Fast-Converging Method for Phylogenetic Tree Reconstruction. 369-386 - Jon M. Kleinberg:
Efficient Algorithms for Protein Sequence Design and the Analysis of Certain Evolutionary Fitness Landscapes. 387-404 - Richard H. Lathrop:
An Anytime Local-to-Global Optimization Algorithm for Protein Threading in O(m2n2) Space. 405-418 - Lior Pachter, Serafim Batzoglou, Valentin I. Spitkovsky, Eric Banks, Eric S. Lander, Daniel J. Kleitman, Bonnie Berger:
A Dictionary-Based Approach for Gene Annotation. 419-430 - David Sankoff, Mathieu Blanchette:
Phylogenetic Invariants for Genome Rearrangements. 431-445 - Peter Willett:
Dissimilarity-Based Algorithms for Selecting Structurally Diverse Sets of Compounds. 447-457 - John C. Wooley:
Trends in Computational Biology: A Summary Based on a RECOMB Plenary Lecture, 1999. 459-474
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