Medical Image Analysis, Volume 13

Volume 13, Number 1, February 2009

• Fan Zhang, Edwin R. Hancock, Casey Goodlett, Guido Gerig:
  Probabilistic white matter fiber tracking using particle filtering and von Mises-Fisher sampling. 5-18
  
• Marcos Martín-Fernández, Emma Muñoz-Moreno, Leila Cammoun, Jean-Philippe Thiran, Carl-Fredrik Westin, Carlos Alberola-López:
  Sequential anisotropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data. 19-35
  
• Stathis Hadjidemetriou, Colin Studholme, Susanne G. Mueller, Michael Weiner, Norbert Schuff:
  Restoration of MRI data for intensity non-uniformities using local high order intensity statistics. 36-48
  
• Xiaoning Qian, Matthew P. Brennan, Donald P. Dione, Wawrzyniec L. Dobrucki, Marcel Jackowski, Christopher K. Breuer, Albert J. Sinusas, Xenophon Papademetris:
  A non-parametric vessel detection method for complex vascular structures. 49-61
  
• Gil Zwirn, Ronen Beeri, Dan Gilon, Zvi Friedman, Solange Akselrod:
  Quantitative evaluation of local myocardial blood volume in contrast echocardiography. 62-79
  
• Stephen L. Keeling, Thomas Kogler, Rudolf Stollberger:
  Deconvolution for DCE-MRI using an exponential approximation basis. 80-90
  
• Misael Rosales, Petia Radeva, Oriol Rodriguez-Leor, Debora Gil:
  Modelling of image-catheter motion for 3-D IVUS. 91-104
  
• Bruce S. Spottiswoode, Xiaodong Zhong, Christine H. Lorenz, Bongani M. Mayosi, Ernesta M. Meintjes, Frederick H. Epstein:
  Motion-guided segmentation for cine DENSE MRI. 105-115
  
• Jean-François Deprez, Elisabeth Brusseau, Cédric Schmitt, Guy Cloutier, Olivier Basset:
  3D estimation of soft biological tissue deformation from radio-frequency ultrasound volume acquisitions. 116-127
  

• Ross T. Whitaker:
  Editorial. 131
  
• Jérôme Boulanger, Charles Kervrann, Patrick Bouthemy:
  A simulation and estimation framework for intracellular dynamics and trafficking in video-microscopy and fluorescence imagery. 132-142
  
• Dirk R. Padfield, Jens Rittscher, Nick Thomas, Badrinath Roysam:
  Spatio-temporal cell cycle phase analysis using level sets and fast marching methods. 143-155
  
• Kishore Mosaliganti, Firdaus Janoos, M. Okan Irfanoglu, Randall Ridgway, Raghu Machiraju, Kun Huang, Joel H. Saltz, Gustavo Leone, Michael C. Ostrowski:
  Tensor classification of N-point correlation function features for histology tissue segmentation. 156-166
  
• Firdaus Janoos, Kishore Mosaliganti, Xiaoyin Xu, Raghu Machiraju, Kun Huang, Stephen T. C. Wong:
  Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging. 167-179
  
• Elizabeth Jurrus, Melissa Hardy, Tolga Tasdizen, P. Thomas Fletcher, Pavel Koshevoy, Chi-Bin Chien, Winfried Denk, Ross T. Whitaker:
  Axon tracking in serial block-face scanning electron microscopy. 180-188
  

Volume 13, Number 2, April 2009

• Hesheng Wang, Baowei Fei:
  A modified fuzzy C-means classification method using a multiscale diffusion filtering scheme. 193-202
  
• Maxime Boucher, Sue Whitesides, Alan C. Evans:
  Depth potential function for folding pattern representation, registration and analysis. 203-214
  
• Ravi Bansal, Lawrence H. Staib, Andrew F. Laine, Dongrong Xu, Jun Liu, Lainie F. Posecion, Bradley S. Peterson:
  Calculation of the confidence intervals for transformation parameters in the registration of medical images. 215-233
  
• Zeike A. Taylor, Olivier Comas, Mario Cheng, Josh Passenger, David J. Hawkes, David Atkinson, Sébastien Ourselin:
  On modelling of anisotropic viscoelasticity for soft tissue simulation: Numerical solution and GPU execution. 234-244
  
• Itay Cohen, Dan Gordon:
  VS: A surface-based system for topological analysis, quantization and visualization of voxel data. 245-256
  
• Stephan Witoszynskyj, Alexander Rauscher, Jürgen R. Reichenbach, Markus Barth:
  Phase unwrapping of MR images using ΦUN - A fast and robust region growing algorithm. 257-268
  
• Marietta L. J. Scott, Paul A. Bromiley, Neil A. Thacker, C. E. Hutchinson, Alan Jackson:
  A fast, model-independent method for cerebral cortical thickness estimation using MRI. 269-285
  
• Lujie Chen, Graham M. Treece, Joel E. Lindop, Andrew H. Gee, Richard W. Prager:
  A quality-guided displacement tracking algorithm for ultrasonic elasticity imaging. 286-296
  
• Marcel Prastawa, Elizabeth Bullitt, Guido Gerig:
  Simulation of brain tumors in MR images for evaluation of segmentation efficacy. 297-311
  
• Piotr M. Szczypinski, Ram D. Sriram, Parupudi V. J. Sriram, D. Nageshwar Reddy:
  A model of deformable rings for interpretation of wireless capsule endoscopic videos. 312-324
  
• William J. Godinez, Marko Lampe, Stefan Wörz, Barbara Müller, Roland Eils, Karl Rohr:
  Deterministic and probabilistic approaches for tracking virus particles in time-lapse fluorescence microscopy image sequences. 325-342
  

• Frank B. Sachse, Gunnar Seemann:
  Special issue: Functional imaging and modelling of the heart. 345
  
• Wilco Kroon, Tammo Delhaas, Peter Bovendeerd, Theo Arts:
  Computational analysis of the myocardial structure: Adaptation of cardiac myofiber orientations through deformation. 346-353
  
• Nikhil S. Phatak, Steve A. Maas, Alexander I. Veress, Nathan A. Pack, Edward V. R. Di Bella, Jeffrey A. Weiss:
  Strain measurement in the left ventricle during systole with deformable image registration. 354-361
  
• Roy Kerckhoffs, Andrew D. McCulloch, Jeffrey H. Omens, Lawrence J. Mulligan:
  Effects of biventricular pacing and scar size in a computational model of the failing heart with left bundle branch block. 362-369
  
• Mihaela Pop, Maxime Sermesant, Damien Lepiller, Michael V. Truong, Elliot R. McVeigh, Eugene Crystal, Alexander Dick, Herve Delingette, Nicholas Ayache, Graham A. Wright:
  Fusion of optical imaging and MRI for the evaluation and adjustment of macroscopic models of cardiac electrophysiology: A feasibility study. 370-380
  

Volume 13, Number 3, June 2009

• Roger C. Tam, Andrew Riddehough, David K. B. Li:
  Detection and measurement of coverage loss in interleaved multi-acquisition brain MRIs due to motion-induced inter-slice misalignment. 381-391
  
• Jong-Hwan Lee, Matthew Marzelli, Ferenc A. Jolesz, Seung-Schik Yoo:
  Automated classification of fMRI data employing trial-based imagery tasks. 392-404
  
• Carole Frindel, Marc C. Robini, Pierre Croisille, Yue-Min Zhu:
  Comparison of regularization methods for human cardiac diffusion tensor MRI. 405-418
  
• Andrew P. King, Redha Boubertakh, Kawal S. Rhode, YingLiang Ma, Phani Chinchapatnam, Gang Gao, T. Tangcharoen, Matthew Ginks, Michael Cooklin, Jaswinder S. Gill, David J. Hawkes, Reza Razavi, Tobias Schaeffter:
  A subject-specific technique for respiratory motion correction in image-guided cardiac catheterisation procedures. 419-431
  
• Yogesh Rathi, Oleg V. Michailovich, Martha Elizabeth Shenton, Sylvain Bouix:
  Directional functions for orientation distribution estimation. 432-444
  
• Rebecca Kokes, Kevin Lister, Rao P. Gullapalli, Bao Zhang, Alan MacMillan, Howard Richard, Jaydev P. Desai:
  Towards a teleoperated needle driver robot with haptic feedback for RFA of breast tumors under continuous MRI. 445-455
  
• Cybèle Ciofolo, Christian Barillot:
  Atlas-based segmentation of 3D cerebral structures with competitive level sets and fuzzy control. 456-470
  
• Tobias Klinder, Jörn Ostermann, Matthias Ehm, Astrid Franz, Reinhard Kneser, Cristian Lorenz:
  Automated model-based vertebra detection, identification, and segmentation in CT images. 471-482
  
• Fei Zhao, Honghai Zhang, Andreas Wahle, Matthew T. Thomas, Alan Stolpen, Thomas D. Scholz, Milan Sonka:
  Congenital aortic disease: 4D magnetic resonance segmentation and quantitative analysis. 483-493
  
• Stéphane Nicolau, Xavier Pennec, Luc Soler, X. Buy, Afshin Gangi, Nicholas Ayache, Jacques Marescaux:
  An augmented reality system for liver thermal ablation: Design and evaluation on clinical cases. 494-506
  
• Ivica Kopriva, A. Persin:
  Unsupervised decomposition of low-intensity low-dimensional multi-spectral fluorescent images for tumour demarcation. 507-518
  
• Guillaume Piliere, Mark H. Van Horn, Robert Dixon, Joseph Stavas, Stephen R. Aylward, Elizabeth Bullitt:
  Vessel target location estimation during the TIPS procedure. 519-529
  
• P. Varga, P. K. Zysset:
  Sampling sphere orientation distribution: An efficient method to quantify trabecular bone fabric on grayscale images. 530-541
  

• LinLin Shen, Li Bai, Dorothee Auer:
  Erratum to "3D Gabor wavelets for evaluating SPM normalization algorithm". 542
  

Volume 13, Number 4, August 2009

• Tobias Heimann, Hans-Peter Meinzer:
  Statistical shape models for 3D medical image segmentation: A review. 543-563
  
• Rachid Deriche, Jeff Calder, Maxime Descoteaux:
  Optimal real-time Q-ball imaging using regularized Kalman filtering with incremental orientation sets. 564-579
  
• Ravi Bansal, Lawrence H. Staib, Dongrong Xu, Andrew F. Laine, Jun Liu, Bradley S. Peterson:
  Using Perturbation theory to reduce noise in diffusion tensor fields. 580-597
  
• Benoît Naegel, Alexandru Cernicanu, Jean-Noël Hyacinthe, Maurizio Tognolini, Jean-Paul Vallée:
  SNR enhancement of highly-accelerated real-time cardiac MRI acquisitions based on non-local means algorithm. 598-608
  
• Yangming Ou, Dinggang Shen, Jianchao Zeng, Leon Sun, Judd W. Moul, Christos Davatzikos:
  Sampling the spatial patterns of cancer: Optimized biopsy procedures for estimating prostate cancer volume and Gleason Score. 609-620
  
• Daisuke Deguchi, Kensaku Mori, Marco Feuerstein, Takayuki Kitasaka, Calvin R. Maurer Jr., Yasuhito Suenaga, Hirotsugu Takabatake, Masaki Mori, Hiroshi Natori:
  Selective image similarity measure for bronchoscope tracking based on image registration. 621-633
  
• Renaud Lopes, Nacim Betrouni:
  Fractal and multifractal analysis: A review. 634-649
  
• Clara I. Sánchez, María García, Agustín Mayo, María Isabel López, Roberto Hornero:
  Retinal image analysis based on mixture models to detect hard exudates. 650-658
  
• Songbai Ji, David W. Roberts, Alex Hartov, Keith D. Paulsen:
  Brain-skull contact boundary conditions in an inverse computational deformation model. 659-672
  
• P. Schiavone, F. Chassat, T. Boudou, E. Promayon, F. Valdivia, Y. Payan:
  In vivo measurement of human brain elasticity using a light aspiration device. 673-678
  

Volume 13, Number 5, October 2009

• Igor Yanovsky, Alex D. Leow, Suh Lee, Stanley Osher, Paul M. Thompson:
  Comparing registration methods for mapping brain change using tensor-based morphometry. 679-700
  
• Michiel Schaap, Coert Metz, Theo van Walsum, Alina G. van der Giessen, Annick C. Weustink, Nico Mollet, Christian Bauer, Hrvoje Bogunovic, Carlos Castro-Gonzalez, Xiang Deng, Engin Dikici, Thomas O'Donnell, Michel Frenay, Ola Friman, Marcela Hernández Hoyos, Pieter H. Kitslaar, Karl Krissian, Caroline Kühnel, Miguel A. Luengo-Oroz, Maciej Orkisz, Örjan Smedby, Martin Styner, Andrzej Szymczak, Hüseyin Tek, Chunliang Wang, Simon K. Warfield, Sebastian Zambal, Yong Zhang, Gabriel P. Krestin, Wiro J. Niessen:
  Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms. 701-714
  
• Haz-Edine Assemlal, David Tschumperlé, Luc Brun:
  Efficient and robust computation of PDF features from diffusion MR signal. 715-729
  
• Oscar Acosta, Pierrick Bourgeat, Maria A. Zuluaga, Jurgen Fripp, Olivier Salvado, Sébastien Ourselin:
  Automated voxel-based 3D cortical thickness measurement in a combined Lagrangian-Eulerian PDE approach using partial volume maps. 730-743
  
• Songbai Ji, Alex Hartov, David W. Roberts, Keith D. Paulsen:
  Data assimilation using a gradient descent method for estimation of intraoperative brain deformation. 744-756
  
• Keelin Murphy, Bram van Ginneken, Arnold M. R. Schilham, Bartjan de Hoop, H. A. Gietema, Mathias Prokop:
  A large-scale evaluation of automatic pulmonary nodule detection in chest CT using local image features and k-nearest-neighbour classification. 757-770
  

• Dimitris N. Metaxas, Leon Axel:
  Editorial. 771-772
  
• Vicky Y. Wang, H. I. Lam, Daniel B. Ennis, Brett R. Cowan, Alistair A. Young, Martyn P. Nash:
  Modelling passive diastolic mechanics with quantitative MRI of cardiac structure and function. 773-784
  
• Gert Schoonenberg, Raoul Florent, Pierre Lelong, Onno Wink, Daniel Ruijters, John Carroll, Bart M. ter Haar Romeny:
  Projection-based motion compensation and reconstruction of coronary segments and cardiac implantable devices using rotational X-ray angiography. 785-792
  
• Stanley Durrleman, Xavier Pennec, Alain Trouvé, Nicholas Ayache:
  Statistical models of sets of curves and surfaces based on currents. 793-808
  
• W. H. Greene, Sudhakar Chelikani, Kailas Purushothaman, J. P. S. Knisely, Zhe Chen, Xenophon Papademetris, Lawrence H. Staib, James S. Duncan:
  Constrained non-rigid registration for use in image-guided adaptive radiotherapy. 809-817
  

Volume 13, Number 6, December 2009

• David Lesage, Elsa D. Angelini, Isabelle Bloch, Gareth Funka-Lea:
  A review of 3D vessel lumen segmentation techniques: Models, features and extraction schemes. 819-845
  
• Uwe Jandt, Dirk Schäfer, Michael Grass, Volker Rasche:
  Automatic generation of 3D coronary artery centerlines using rotational X-ray angiography. 846-858
  
• Meindert Niemeijer, Michael D. Abràmoff, Bram van Ginneken:
  Fast detection of the optic disc and fovea in color fundus photographs. 859-870
  
• László Ruskó, György Bekes, Márta Fidrich:
  Automatic segmentation of the liver from multi- and single-phase contrast-enhanced CT images. 871-882
  
• Guoyan Zheng, Sebastian Gollmer, Steffen Schumann, Xiao Dong, Thomas Feilkas, Miguel Ángel González Ballester:
  A 2D/3D correspondence building method for reconstruction of a patient-specific 3D bone surface model using point distribution models and calibrated X-ray images. 883-899
  
• A. Kalemis, D. M. Binnie, M. A. Flower, R. J. Ott:
  Image intensity normalisation by maximising the Siddon line integral in the joint intensity distribution space. 900-909
  

• Marcos Martín-Fernández, Emma Muñoz-Moreno, Leila Cammoun, Jean-Philippe Thiran, Carl-Fredrik Westin, Carlos Alberola-López:
  Addendum to "Sequential anisotropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data" [Medical Image Analysis 13 (2009) 19-35]. 910
  

• Karol Miller:
  Editorial. 911
  
• Grand Roman Joldes, Adam Wittek, Karol Miller:
  Suite of finite element algorithms for accurate computation of soft tissue deformation for surgical simulation. 912-919
  
• Guangqiang Geng, Leigh A. Johnston, Edwin Yan, Joanne M. Britto, David W. Smith, David W. Walker, Gary F. Egan:
  Biomechanisms for modelling cerebral cortical folding. 920-930
  
• Tauseef ur Rehman, Eldad Haber, Gallagher Pryor, John Melonakos, Allen Tannenbaum:
  3D nonrigid registration via optimal mass transport on the GPU. 931-940
  

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