Stop the war!
Остановите войну!
for scientists:
default search action
BibTeX records: Rolf Apweiler
@article{DBLP:journals/nar/CantelliBBPMIHF22, author = {Gaia Cantelli and Alex Bateman and Cath Brooksbank and Anton I. Petrov and Rahuman S. Malik{-}Sheriff and Michele Ide{-}Smith and Henning Hermjakob and Paul Flicek and Rolf Apweiler and Ewan Birney and Johanna R. McEntyre}, title = {The European Bioinformatics Institute {(EMBL-EBI)} in 2021}, journal = {Nucleic Acids Res.}, volume = {50}, number = {{D1}}, pages = {11--19}, year = {2022}, url = {https://doi.org/10.1093/nar/gkab1127}, doi = {10.1093/NAR/GKAB1127}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/CantelliBBPMIHF22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CantelliCBMFMBA21, author = {Gaia Cantelli and Guy Cochrane and Cath Brooksbank and Ellen M. McDonagh and Paul Flicek and Johanna R. McEntyre and Ewan Birney and Rolf Apweiler}, title = {The European Bioinformatics Institute: empowering cooperation in response to a global health crisis}, journal = {Nucleic Acids Res.}, volume = {49}, number = {Database-Issue}, pages = {D29--D37}, year = {2021}, url = {https://doi.org/10.1093/nar/gkaa1077}, doi = {10.1093/NAR/GKAA1077}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CantelliCBMFMBA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HarrisonLRAABCF21, author = {Peter W. Harrison and Rodrigo Lopez and Nadim Rahman and Stefan Gutnick Allen and Raheela Aslam and Nicola Buso and Carla A. Cummins and Yasmin Fathy and Eloy Felix and Mihai Glont and Suran Jayathilaka and Sandeep Kadam and Manish Kumar and Katharina B. Lauer and Geetika Malhotra and Abayomi Mosaku and Ossama Edbali and Young Mi Park and Andrew Parton and Matt Pearce and Jose Francisco Estrada pena and Joseph Rossetto and Craig Russell and Sandeep Selvakumar and X{\`{e}}nia P{\'{e}}rez Sitj{\`{a}} and Alexey Sokolov and Ross Thorne and Marianna Ventouratou and Peter Walter and Galabina Yordanova and Amonida Zadissa and Guy Cochrane and Niklas Blomberg and Rolf Apweiler}, title = {The {COVID-19} Data Portal: accelerating SARS-CoV-2 and {COVID-19} research through rapid open access data sharing}, journal = {Nucleic Acids Res.}, volume = {49}, number = {Webserver-Issue}, pages = {619--623}, year = {2021}, url = {https://doi.org/10.1093/nar/gkab417}, doi = {10.1093/NAR/GKAB417}, timestamp = {Thu, 05 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/HarrisonLRAABCF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CookSCBA20, author = {Charles E. Cook and Oana Stroe and Guy Cochrane and Ewan Birney and Rolf Apweiler}, title = {The European Bioinformatics Institute in 2020: building a global infrastructure of interconnected data resources for the life sciences}, journal = {Nucleic Acids Res.}, volume = {48}, number = {Database-Issue}, pages = {D17--D23}, year = {2020}, url = {https://doi.org/10.1093/nar/gkz1033}, doi = {10.1093/NAR/GKZ1033}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CookSCBA20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CookLSCBBA19, author = {Charles E. Cook and Rodrigo Lopez and Oana Stroe and Guy Cochrane and Cath Brooksbank and Ewan Birney and Rolf Apweiler}, title = {The European Bioinformatics Institute in 2018: tools, infrastructure and training}, journal = {Nucleic Acids Res.}, volume = {47}, number = {Database-Issue}, pages = {D15--D22}, year = {2019}, url = {https://doi.org/10.1093/nar/gky1124}, doi = {10.1093/NAR/GKY1124}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CookLSCBBA19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CookBCAB18, author = {Charles E. Cook and Mary Todd Bergman and Guy Cochrane and Rolf Apweiler and Ewan Birney}, title = {The European Bioinformatics Institute in 2017: data coordination and integration}, journal = {Nucleic Acids Res.}, volume = {46}, number = {Database-Issue}, pages = {D21--D29}, year = {2018}, url = {https://doi.org/10.1093/nar/gkx1154}, doi = {10.1093/NAR/GKX1154}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CookBCAB18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CookBFCBA16, author = {Charles E. Cook and Mary Todd Bergman and Robert D. Finn and Guy Cochrane and Ewan Birney and Rolf Apweiler}, title = {The European Bioinformatics Institute in 2016: Data growth and integration}, journal = {Nucleic Acids Res.}, volume = {44}, number = {Database-Issue}, pages = {20--26}, year = {2016}, url = {https://doi.org/10.1093/nar/gkv1352}, doi = {10.1093/NAR/GKV1352}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CookBFCBA16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BrooksbankBABT14, author = {Catherine Brooksbank and Mary Todd Bergman and Rolf Apweiler and Ewan Birney and Janet M. Thornton}, title = {The European Bioinformatics Institute's data resources 2014}, journal = {Nucleic Acids Res.}, volume = {42}, number = {Database-Issue}, pages = {18--25}, year = {2014}, url = {https://doi.org/10.1093/nar/gkt1206}, doi = {10.1093/NAR/GKT1206}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BrooksbankBABT14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biodb/Mutowo-MeullenetHDASMOA13, author = {Prudence Mutowo{-}Meullenet and Rachael P. Huntley and Emily C. Dimmer and Yasmin Alam{-}Faruque and Tony Sawford and Maria Jesus Martin and Claire O'Donovan and Rolf Apweiler}, title = {Use of Gene Ontology Annotation to understand the peroxisome proteome in humans}, journal = {Database J. Biol. Databases Curation}, volume = {2013}, year = {2013}, url = {https://doi.org/10.1093/database/bas062}, doi = {10.1093/DATABASE/BAS062}, timestamp = {Thu, 13 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biodb/Mutowo-MeullenetHDASMOA13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HunterJM12, author = {Sarah Hunter and Philip Jones and Alex L. Mitchell and Rolf Apweiler and Teresa K. Attwood and Alex Bateman and Thomas Bernard and David Binns and Peer Bork and Sarah W. Burge and Edouard De Castro and Penny C. Coggill and Matthew Corbett and Ujjwal Das and Louise C. Daugherty and Lauranne Duquenne and Robert D. Finn and Matthew Fraser and Julian Gough and Daniel H. Haft and Nicolas Hulo and Daniel Kahn and Elizabeth Kelly and Ivica Letunic and David Lonsdale and Rodrigo Lopez and Martin Madera and John Maslen and Craig McAnulla and Jennifer McDowall and Conor McMenamin and Huaiyu Mi and Prudence Mutowo{-}Meullenet and Nicola J. Mulder and Darren A. Natale and Christine A. Orengo and Sebastien Pesseat and Marco Punta and Antony F. Quinn and Catherine Rivoire and Amaia Sangrador{-}Vegas and Jeremy D. Selengut and Christian J. A. Sigrist and Maxim Scheremetjew and John G. Tate and Manjulapramila Thimmajanarthanan and Paul D. Thomas and Cathy H. Wu and Corin Yeats and Siew{-}Yit Yong}, title = {InterPro in 2011: new developments in the family and domain prediction database}, journal = {Nucleic Acids Res.}, volume = {40}, number = {Database-Issue}, pages = {306--312}, year = {2012}, url = {https://doi.org/10.1093/nar/gkr948}, doi = {10.1093/NAR/GKR948}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HunterJM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DimmerHA12, author = {Emily C. Dimmer and Rachael P. Huntley and Yasmin Alam{-}Faruque and Tony Sawford and Claire O'Donovan and Maria Jesus Martin and Benoit Bely and Paul Browne and Wei Mun Chan and Ruth Y. Eberhardt and Michael Gardner and Kati Laiho and Duncan Legge and Michele Magrane and Klemens Pichler and Diego Poggioli and Harminder Sehra and Andrea H. Auchincloss and Kristian B. Axelsen and Marie{-}Claude Blatter and Emmanuel Boutet and Silvia Braconi{-}Quintaje and Lionel Breuza and Alan J. Bridge and Elisabeth Coudert and Anne Estreicher and Maria Livia Famiglietti and Serenella Ferro{-}Rojas and Marc Feuermann and Arnaud Gos and Nadine Gruaz{-}Gumowski and Ursula Hinz and Chantal Hulo and Janet James and Silvia Jimenez and Florence Jungo and Guillaume Keller and Phillippe Lemercier and Damien Lieberherr and Patrick Masson and Madelaine Moinat and Ivo Pedruzzi and Sylvain Poux and Catherine Rivoire and Bernd Roechert and Michel Schneider and Andre Stutz and Shyamala Sundaram and Michael Tognolli and Lydie Bougueleret and Ghislaine Argoud{-}Puy and Isabelle Cusin and Paula Duek{-}Roggli and Ioannis Xenarios and Rolf Apweiler}, title = {The UniProt-GO Annotation database in 2011}, journal = {Nucleic Acids Res.}, volume = {40}, number = {Database-Issue}, pages = {565--570}, year = {2012}, url = {https://doi.org/10.1093/nar/gkr1048}, doi = {10.1093/NAR/GKR1048}, timestamp = {Fri, 15 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/DimmerHA12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tcbb/FreitasWA10, author = {Alex Alves Freitas and Daniela Wieser and Rolf Apweiler}, title = {On the Importance of Comprehensible Classification Models for Protein Function Prediction}, journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.}, volume = {7}, number = {1}, pages = {172--182}, year = {2010}, url = {https://doi.org/10.1109/TCBB.2008.47}, doi = {10.1109/TCBB.2008.47}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tcbb/FreitasWA10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1011-0810, author = {Nell Sedransk and Lawrence H. Cox and Deborah Nolan and Keith Soper and Clifford H. Spiegelman and Linda J. Young and Katrina L. Kelner and Robert A. Moffitt and Ani Thakar and M. Jordan Raddick and Edward J. Ungvarsky and Richard W. Carlson and Rolf Apweiler}, title = {Make Research Data Public?---Not Always so Simple: {A} Dialogue for Statisticians and Science Editors}, journal = {CoRR}, volume = {abs/1011.0810}, year = {2010}, url = {http://arxiv.org/abs/1011.0810}, eprinttype = {arXiv}, eprint = {1011.0810}, timestamp = {Wed, 03 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-1011-0810.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biodb/HuntleyBDBOA09, author = {Rachael P. Huntley and David Binns and Emily Dimmer and Daniel Barrell and Claire O'Donovan and Rolf Apweiler}, title = {QuickGO: a user tutorial for the web-based Gene Ontology browser}, journal = {Database J. Biol. Databases Curation}, volume = {2009}, year = {2009}, url = {https://doi.org/10.1093/database/bap010}, doi = {10.1093/DATABASE/BAP010}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biodb/HuntleyBDBOA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/YeSLAN09, author = {Kai Ye and Marcel H. Schulz and Quan Long and Rolf Apweiler and Zemin Ning}, title = {Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads}, journal = {Bioinform.}, volume = {25}, number = {21}, pages = {2865--2871}, year = {2009}, url = {https://doi.org/10.1093/bioinformatics/btp394}, doi = {10.1093/BIOINFORMATICS/BTP394}, timestamp = {Wed, 27 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/YeSLAN09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BinnsDHBOA09, author = {David Binns and Emily Dimmer and Rachael P. Huntley and Daniel Barrell and Claire O'Donovan and Rolf Apweiler}, title = {QuickGO: a web-based tool for Gene Ontology searching}, journal = {Bioinform.}, volume = {25}, number = {22}, pages = {3045--3046}, year = {2009}, url = {https://doi.org/10.1093/bioinformatics/btp536}, doi = {10.1093/BIOINFORMATICS/BTP536}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/BinnsDHBOA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HunterAABBBBDDDFGHHKKLLLLMMMMMMMNOQSSTTVWWY09, author = {Sarah Hunter and Rolf Apweiler and Teresa K. Attwood and Amos Bairoch and Alex Bateman and David Binns and Peer Bork and Ujjwal Das and Louise C. Daugherty and Lauranne Duquenne and Robert D. Finn and Julian Gough and Daniel H. Haft and Nicolas Hulo and Daniel Kahn and Elizabeth Kelly and Aur{\'{e}}lie Laugraud and Ivica Letunic and David Lonsdale and Rodrigo Lopez and Martin Madera and John Maslen and Craig McAnulla and Jennifer McDowall and Jaina Mistry and Alex L. Mitchell and Nicola J. Mulder and Darren A. Natale and Christine A. Orengo and Antony F. Quinn and Jeremy D. Selengut and Christian J. A. Sigrist and Manjula Thimma and Paul D. Thomas and Franck Valentin and Derek Wilson and Cathy H. Wu and Corin Yeats}, title = {InterPro: the integrative protein signature database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {211--215}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn785}, doi = {10.1093/NAR/GKN785}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HunterAABBBBDDDFGHHKKLLLLMMMMMMMNOQSSTTVWWY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BarrellDHBOA09, author = {Daniel Barrell and Emily Dimmer and Rachael P. Huntley and David Binns and Claire O'Donovan and Rolf Apweiler}, title = {The {GOA} database in 2009 - an integrated Gene Ontology Annotation resource}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {396--403}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn803}, doi = {10.1093/NAR/GKN803}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BarrellDHBOA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:books/igi/09/CoutoSLDCA09, author = {Francisco M. Couto and M{\'{a}}rio J. Silva and Vivian Lee and Emily Dimmer and Evelyn Camon and Rolf Apweiler}, editor = {Violaine Prince and Mathieu Roche}, title = {Verification of Uncurated Protein Annotations}, booktitle = {Information Retrieval in Biomedicine - Natural Language Processing for Knowledge Integration}, pages = {301--314}, publisher = {{IGI} Global}, year = {2009}, url = {https://doi.org/10.4018/978-1-60566-274-9.ch016}, doi = {10.4018/978-1-60566-274-9.CH016}, timestamp = {Mon, 16 Sep 2019 14:43:09 +0200}, biburl = {https://dblp.org/rec/books/igi/09/CoutoSLDCA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/PatientWKKMA08, author = {Samuel Patient and Daniela Wieser and Michael Kleen and Ernst Kretschmann and Maria Jesus Martin and Rolf Apweiler}, title = {UniProtJAPI: a remote {API} for accessing UniProt data}, journal = {Bioinform.}, volume = {24}, number = {10}, pages = {1321--1322}, year = {2008}, url = {https://doi.org/10.1093/bioinformatics/btn122}, doi = {10.1093/BIOINFORMATICS/BTN122}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/PatientWKKMA08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CochraneAAABBBBBBCCDEFHJKLLLLLLMMNPRSVWZAHB08, author = {Guy Cochrane and Ruth Akhtar and Philippe Aldebert and Nicola Althorpe and Alastair Baldwin and Kirsty Bates and Sumit Bhattacharyya and James K. Bonfield and Lawrence Bower and Paul Browne and Matias Castro and Tony Cox and Fehmi Demiralp and Ruth Y. Eberhardt and Nadeem Faruque and Gemma Hoad and Mikyung Jang and Tamara Kulikova and Alberto Labarga and Rasko Leinonen and Steven Leonard and Quan Lin and Rodrigo Lopez and Dariusz Lorenc and Hamish McWilliam and Gaurab Mukherjee and Francesco Nardone and Sheila Plaister and Stephen Robinson and Siamak Sobhany and Robert Vaughan and Dan Wu and Weimin Zhu and Rolf Apweiler and Tim J. P. Hubbard and Ewan Birney}, title = {Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the {EMBL} Nucleotide Sequence Database}, journal = {Nucleic Acids Res.}, volume = {36}, number = {Database-Issue}, pages = {5--12}, year = {2008}, url = {https://doi.org/10.1093/nar/gkm1018}, doi = {10.1093/NAR/GKM1018}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CochraneAAABBBBBBCCDEFHJKLLLLLLMMNPRSVWZAHB08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CoteJMAH08, author = {Richard G. C{\^{o}}t{\'{e}} and Philip Jones and Lennart Martens and Rolf Apweiler and Henning Hermjakob}, title = {The Ontology Lookup Service: more data and better tools for controlled vocabulary queries}, journal = {Nucleic Acids Res.}, volume = {36}, number = {Web-Server-Issue}, pages = {372--376}, year = {2008}, url = {https://doi.org/10.1093/nar/gkn252}, doi = {10.1093/NAR/GKN252}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CoteJMAH08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CoteJMKRLLAH07, author = {Richard G. C{\^{o}}t{\'{e}} and Philip Jones and Lennart Martens and Samuel Kerrien and Florian Reisinger and Quan Lin and Rasko Leinonen and Rolf Apweiler and Henning Hermjakob}, title = {The Protein Identifier Cross-Referencing {(PICR)} service: reconciling protein identifiers across multiple source databases}, journal = {{BMC} Bioinform.}, volume = {8}, year = {2007}, url = {https://doi.org/10.1186/1471-2105-8-401}, doi = {10.1186/1471-2105-8-401}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/CoteJMKRLLAH07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KulikovaAAAABBBBBCCDEFHKLLLLLLMMNPPSSVWZA07, author = {Tamara Kulikova and Ruth Akhtar and Philippe Aldebert and Nicola Althorpe and Mikael Andersson and Alastair Baldwin and Kirsty Bates and Sumit Bhattacharyya and Lawrence Bower and Paul Browne and Matias Castro and Guy Cochrane and Karyn Duggan and Ruth Y. Eberhardt and Nadeem Faruque and Gemma Hoad and Carola Kanz and Charles Lee and Rasko Leinonen and Quan Lin and Vincent Lombard and Rodrigo Lopez and Dariusz Lorenc and Hamish McWilliam and Gaurab Mukherjee and Francesco Nardone and Maria Pilar Garcia Pastor and Sheila Plaister and Siamak Sobhany and Peter Stoehr and Robert Vaughan and Dan Wu and Weimin Zhu and Rolf Apweiler}, title = {{EMBL} Nucleotide Sequence Database in 2006}, journal = {Nucleic Acids Res.}, volume = {35}, number = {Database-Issue}, pages = {16--20}, year = {2007}, url = {https://doi.org/10.1093/nar/gkl913}, doi = {10.1093/NAR/GKL913}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KulikovaAAAABBBBBCCDEFHKLLLLLLMMNPPSSVWZA07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MulderAA07, author = {Nicola J. Mulder and Rolf Apweiler and Teresa K. Attwood and Amos Bairoch and Alex Bateman and David Binns and Peer Bork and Virginie Buillard and Lorenzo Cerutti and Richard R. Copley and Emmanuel Courcelle and Ujjwal Das and Louise C. Daugherty and Mark Dibley and Robert D. Finn and Wolfgang Fleischmann and Julian Gough and Daniel H. Haft and Nicolas Hulo and Sarah Hunter and Daniel Kahn and Alexander Kanapin and Anish Kejariwal and Alberto Labarga and Petra S. Langendijk{-}Genevaux and David Lonsdale and Rodrigo Lopez and Ivica Letunic and Martin Madera and John Maslen and Craig McAnulla and Jennifer McDowall and Jaina Mistry and Alex L. Mitchell and Anastasia N. Nikolskaya and Sandra E. Orchard and Christine A. Orengo and Robert Petryszak and Jeremy D. Selengut and Christian J. A. Sigrist and Paul D. Thomas and Franck Valentin and Derek Wilson and Cathy H. Wu and Corin Yeats}, title = {New developments in the InterPro database}, journal = {Nucleic Acids Res.}, volume = {35}, number = {Database-Issue}, pages = {224--228}, year = {2007}, url = {https://doi.org/10.1093/nar/gkl841}, doi = {10.1093/NAR/GKL841}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MulderAA07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KerrienAABBDDFFHKKLLLMORRRTZAH07, author = {Samuel Kerrien and Yasmin Alam{-}Faruque and Bruno Aranda and I. Bancarz and Alan J. Bridge and C. Derow and Emily Dimmer and Marc Feuermann and A. Friedrichsen and Rachael P. Huntley and C. Kohler and Jyoti Khadake and C. Leroy and A. Liban and C. Lieftink and Luisa Montecchi{-}Palazzi and Sandra E. Orchard and Judith E. Risse and Karine Robbe and Bernd Roechert and David Thorneycroft and Y. Zhang and Rolf Apweiler and Henning Hermjakob}, title = {IntAct - open source resource for molecular interaction data}, journal = {Nucleic Acids Res.}, volume = {35}, number = {Database-Issue}, pages = {561--565}, year = {2007}, url = {https://doi.org/10.1093/nar/gkl958}, doi = {10.1093/NAR/GKL958}, timestamp = {Fri, 15 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/KerrienAABBDDFFHKKLLLMORRRTZAH07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/KlieMVCJAHH07, author = {Sebastian Klie and Lennart Martens and Juan Antonio Vizca{\'{\i}}no and Richard G. C{\^{o}}t{\'{e}} and Philip Jones and Rolf Apweiler and Alexander Hinneburg and Henning Hermjakob}, editor = {Claudia Falter and Alexander Schliep and Joachim Selbig and Martin Vingron and Dirk Walther}, title = {An Application of Latent Topic Document Analysis to Large-Scale Proteomics Databases}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 2007, September 26-28, 2007, Potsdam, Germany}, series = {{LNI}}, volume = {{P-115}}, pages = {174--184}, publisher = {{GI}}, year = {2007}, url = {https://dl.gi.de/handle/20.500.12116/22366}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/KlieMVCJAHH07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/lwa/KlieHMVCJAH07, author = {Sebastian Klie and Alexander Hinneburg and Lennart Martens and Juan Antonio Vizca{\'{\i}}no and Richard G. C{\^{o}}t{\'{e}} and Philip Jones and Rolf Apweiler and Henning Hermjakob}, editor = {Alexander Hinneburg}, title = {Analysing latent topics in large-scale proteomics}, booktitle = {{LWA} 2007: Lernen - Wissen - Adaption, Halle, Deutschland, September 2007, Workshop Proceedings}, pages = {73--80}, publisher = {Martin-Luther-University Halle-Wittenberg}, year = {2007}, timestamp = {Thu, 05 Jul 2018 07:57:33 +0200}, biburl = {https://dblp.org/rec/conf/lwa/KlieHMVCJAH07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/LeinonenNZA06, author = {Rasko Leinonen and Francesco Nardone and Weimin Zhu and Rolf Apweiler}, title = {UniSave: the UniProtKB Sequence/Annotation Version database}, journal = {Bioinform.}, volume = {22}, number = {10}, pages = {1284--1285}, year = {2006}, url = {https://doi.org/10.1093/bioinformatics/btl105}, doi = {10.1093/BIOINFORMATICS/BTL105}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/LeinonenNZA06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CoteJAH06, author = {Richard G. C{\^{o}}t{\'{e}} and Philip Jones and Rolf Apweiler and Henning Hermjakob}, title = {The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries}, journal = {{BMC} Bioinform.}, volume = {7}, pages = {97}, year = {2006}, url = {https://doi.org/10.1186/1471-2105-7-97}, doi = {10.1186/1471-2105-7-97}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/CoteJAH06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CochraneAAABBBBBBCDEFGKKLLLLLMMMNPSSTVWZA06, author = {Guy Cochrane and Philippe Aldebert and Nicola Althorpe and Mikael Andersson and Wendy Baker and Alastair Baldwin and Kirsty Bates and Sumit Bhattacharyya and Paul Browne and Alexandra van den Broek and Matias Castro and Karyn Duggan and Ruth Y. Eberhardt and Nadeem Faruque and John Gamble and Carola Kanz and Tamara Kulikova and Charles Lee and Rasko Leinonen and Quan Lin and Vincent Lombard and Rodrigo Lopez and Michelle McHale and Hamish McWilliam and Gaurab Mukherjee and Francesco Nardone and Maria Pilar Garcia Pastor and Siamak Sobhany and Peter Stoehr and Katerina Tzouvara and Robert Vaughan and Dan Wu and Weimin Zhu and Rolf Apweiler}, title = {{EMBL} Nucleotide Sequence Database: developments in 2005}, journal = {Nucleic Acids Res.}, volume = {34}, number = {Database-Issue}, pages = {10--15}, year = {2006}, url = {https://doi.org/10.1093/nar/gkj130}, doi = {10.1093/NAR/GKJ130}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CochraneAAABBBBBBCDEFGKKLLLLLMMMNPSSTVWZA06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WuABNBBFGHLMMMORS06, author = {Cathy H. Wu and Rolf Apweiler and Amos Bairoch and Darren A. Natale and Winona C. Barker and Brigitte Boeckmann and Serenella Ferro and Elisabeth Gasteiger and Hongzhan Huang and Rodrigo Lopez and Michele Magrane and Maria Jesus Martin and Raja Mazumder and Claire O'Donovan and Nicole Redaschi and Baris E. Suzek}, title = {The Universal Protein Resource (UniProt): an expanding universe of protein information}, journal = {Nucleic Acids Res.}, volume = {34}, number = {Database-Issue}, pages = {187--191}, year = {2006}, url = {https://doi.org/10.1093/nar/gkj161}, doi = {10.1093/NAR/GKJ161}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WuABNBBFGHLMMMORS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/JonesCMQTDHA06, author = {Philip Jones and Richard G. C{\^{o}}t{\'{e}} and Lennart Martens and Antony F. Quinn and Chris F. Taylor and William Derache and Henning Hermjakob and Rolf Apweiler}, title = {{PRIDE:} a public repository of protein and peptide identifications for the proteomics community}, journal = {Nucleic Acids Res.}, volume = {34}, number = {Database-Issue}, pages = {659--663}, year = {2006}, url = {https://doi.org/10.1093/nar/gkj138}, doi = {10.1093/NAR/GKJ138}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/JonesCMQTDHA06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/JonesVDHKKQWHA05, author = {Philip Jones and Nisha Vinod and Thomas A. Down and Andre Hackmann and Andreas K{\"{a}}h{\"{a}}ri and Ernst Kretschmann and Antony F. Quinn and Daniela Wieser and Henning Hermjakob and Rolf Apweiler}, title = {Dasty and UniProt {DAS:} a perfect pair for protein feature visualization}, journal = {Bioinform.}, volume = {21}, number = {14}, pages = {3198--3199}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bti506}, doi = {10.1093/BIOINFORMATICS/BTI506}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/JonesVDHKKQWHA05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/PetryszakKWA05, author = {Robert Petryszak and Ernst Kretschmann and Daniela Wieser and Rolf Apweiler}, title = {The predictive power of the CluSTr database}, journal = {Bioinform.}, volume = {21}, number = {18}, pages = {3604--3609}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bti542}, doi = {10.1093/BIOINFORMATICS/BTI542}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/PetryszakKWA05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BlaschkeYCCAHV05, author = {Christian Blaschke and Alexander S. Yeh and Evelyn Camon and Marc E. Colosimo and Rolf Apweiler and Lynette Hirschman and Alfonso Valencia}, title = {Do you do text?}, journal = {Bioinform.}, volume = {21}, number = {23}, pages = {4199--4200}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bti695}, doi = {10.1093/BIOINFORMATICS/BTI695}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/BlaschkeYCCAHV05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CamonBDLMMBA05, author = {Evelyn Camon and Daniel Barrell and Emily Dimmer and Vivian Lee and Michele Magrane and John Maslen and David Binns and Rolf Apweiler}, title = {An evaluation of {GO} annotation retrieval for BioCreAtIvE and {GOA}}, journal = {{BMC} Bioinform.}, volume = {6}, number = {{S-1}}, year = {2005}, url = {https://doi.org/10.1186/1471-2105-6-S1-S17}, doi = {10.1186/1471-2105-6-S1-S17}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/CamonBDLMMBA05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KanzAABBBBBCCDEFGDHKLLLMMNSSSTTVWZA05, author = {Carola Kanz and Philippe Aldebert and Nicola Althorpe and Wendy Baker and Alastair Baldwin and Kirsty Bates and Paul Browne and Alexandra van den Broek and Matias Castro and Guy Cochrane and Karyn Duggan and Ruth Y. Eberhardt and Nadeem Faruque and John Gamble and Federico Garcia Diez and Nicola Harte and Tamara Kulikova and Quan Lin and Vincent Lombard and Rodrigo Lopez and Renato Mancuso and Michelle McHale and Francesco Nardone and Ville Silventoinen and Siamak Sobhany and Peter Stoehr and Mary Ann Tuli and Katerina Tzouvara and Robert Vaughan and Dan Wu and Weimin Zhu and Rolf Apweiler}, title = {The {EMBL} Nucleotide Sequence Database}, journal = {Nucleic Acids Res.}, volume = {33}, number = {Database-Issue}, pages = {29--33}, year = {2005}, url = {https://doi.org/10.1093/nar/gki098}, doi = {10.1093/NAR/GKI098}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KanzAABBBBBCCDEFGDHKLLLMMNSSSTTVWZA05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BairochAWBBFGHLMMNORY05, author = {Amos Bairoch and Rolf Apweiler and Cathy H. Wu and Winona C. Barker and Brigitte Boeckmann and Serenella Ferro and Elisabeth Gasteiger and Hongzhan Huang and Rodrigo Lopez and Michele Magrane and Maria Jesus Martin and Darren A. Natale and Claire O'Donovan and Nicole Redaschi and Lai{-}Su L. Yeh}, title = {The Universal Protein Resource (UniProt)}, journal = {Nucleic Acids Res.}, volume = {33}, number = {Database-Issue}, pages = {154--159}, year = {2005}, url = {https://doi.org/10.1093/nar/gki070}, doi = {10.1093/NAR/GKI070}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BairochAWBBFGHLMMNORY05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MulderAABBBBBBCCCDDFGHHHKKKLLLMMMMNOPPQSSSSVW05, author = {Nicola J. Mulder and Rolf Apweiler and Teresa K. Attwood and Amos Bairoch and Alex Bateman and David Binns and Paul Bradley and Peer Bork and Phillip Bucher and Lorenzo Cerutti and Richard R. Copley and Emmanuel Courcelle and Ujjwal Das and Richard Durbin and Wolfgang Fleischmann and Julian Gough and Daniel H. Haft and Nicola Harte and Nicolas Hulo and Daniel Kahn and Alexander Kanapin and Maria Krestyaninova and David Lonsdale and Rodrigo Lopez and Ivica Letunic and Martin Madera and John Maslen and Jennifer McDowall and Alex L. Mitchell and Anastasia N. Nikolskaya and Sandra E. Orchard and Marco Pagni and Chris P. Ponting and Emmanuel Quevillon and Jeremy D. Selengut and Christian J. A. Sigrist and Ville Silventoinen and David J. Studholme and Robert Vaughan and Cathy H. Wu}, title = {InterPro, progress and status in 2005}, journal = {Nucleic Acids Res.}, volume = {33}, number = {Database-Issue}, pages = {201--205}, year = {2005}, url = {https://doi.org/10.1093/nar/gki106}, doi = {10.1093/NAR/GKI106}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MulderAABBBBBBCCCDDFGHHHKKKLLLMMMMNOPPQSSSSVW05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/VelankarMMSBAH05, author = {Samir S. Velankar and P. McNeil and Virginie Mittard{-}Runte and A. Suarez and Daniel Barrell and Rolf Apweiler and Kim Henrick}, title = {{E-MSD:} an integrated data resource for bioinformatics}, journal = {Nucleic Acids Res.}, volume = {33}, number = {Database-Issue}, pages = {262--265}, year = {2005}, url = {https://doi.org/10.1093/nar/gki058}, doi = {10.1093/NAR/GKI058}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/VelankarMMSBAH05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KerseyBMHPKKDMPGKFDMRDPRA05, author = {Paul J. Kersey and Lawrence Bower and Lorna Morris and Alan Horne and Robert Petryszak and Carola Kanz and Alexander Kanapin and Ujjwal Das and Karine Michoud and Isabelle Phan and Alexandre Gattiker and Tamara Kulikova and Nadeem Faruque and Karyn Duggan and Peter McLaren and Britt Reimholz and Laurent Duret and Simon Penel and Ingmar Reuter and Rolf Apweiler}, title = {Integr8 and Genome Reviews: integrated views of complete genomes and proteomes}, journal = {Nucleic Acids Res.}, volume = {33}, number = {Database-Issue}, pages = {297--302}, year = {2005}, url = {https://doi.org/10.1093/nar/gki039}, doi = {10.1093/NAR/GKI039}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KerseyBMHPKKDMPGKFDMRDPRA05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/QuevillonSPHMAL05, author = {Emmanuel Quevillon and Ville Silventoinen and Sharmila Pillai and Nicola Harte and Nicola J. Mulder and Rolf Apweiler and Rodrigo Lopez}, title = {InterProScan: protein domains identifier}, journal = {Nucleic Acids Res.}, volume = {33}, number = {Web-Server-Issue}, pages = {116--120}, year = {2005}, url = {https://doi.org/10.1093/nar/gki442}, doi = {10.1093/NAR/GKI442}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/QuevillonSPHMAL05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/psb/OrchardMHA05, author = {Sandra E. Orchard and Luisa Montecchi{-}Palazzi and Henning Hermjakob and Rolf Apweiler}, editor = {Russ B. Altman and Tiffany A. Jung and Teri E. Klein and A. Keith Dunker and Lawrence Hunter}, title = {The Use of Common Ontologies and Controlled Vocabularies to Enable Data Exchange and Deposition for Complex Proteomic Experiments}, booktitle = {Biocomputing 2005, Proceedings of the Pacific Symposium, Hawaii, USA, 4-8 January 2005}, publisher = {World Scientific}, year = {2005}, url = {http://psb.stanford.edu/psb-online/proceedings/psb05/orchard.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/psb/OrchardMHA05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:books/wi/05/WilliamsKPA05, author = {Allyson L. Williams and Paul J. Kersey and Manuela Pruess and Rolf Apweiler}, editor = {Francisco Azuaje and Joaqu{\'{\i}}n Dopazo}, title = {Biological Databases: Infrastructure, Content and Integration}, booktitle = {Data Analysis and Visualization in Genomics and Proteomics}, pages = {11--28}, publisher = {Wiley}, year = {2005}, url = {https://doi.org/10.1002/0470094419.ch2}, doi = {10.1002/0470094419.CH2}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/books/wi/05/WilliamsKPA05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/LeinonenDBFLA04, author = {Rasko Leinonen and Federico Garcia Diez and David Binns and Wolfgang Fleischmann and Rodrigo Lopez and Rolf Apweiler}, title = {UniProt archive}, journal = {Bioinform.}, volume = {20}, number = {17}, pages = {3236--3237}, year = {2004}, url = {https://doi.org/10.1093/bioinformatics/bth191}, doi = {10.1093/BIOINFORMATICS/BTH191}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/LeinonenDBFLA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/LeeCDBA04, author = {Vivian Lee and Evelyn Camon and Emily Dimmer and Daniel Barrell and Rolf Apweiler}, title = {GOA? - Use of Gene Ontology Annotation {(GOA)} for biological interpretation of '-omics' data and for validation of automatic annotation tools}, journal = {Silico Biol.}, volume = {5}, number = {1}, pages = {5--8}, year = {2004}, url = {http://content.iospress.com/articles/in-silico-biology/isb00162}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/LeeCDBA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/PruessKA04, author = {Manuela Pruess and Paul J. Kersey and Rolf Apweiler}, title = {The Integr8 project - a resource for genomic and proteomic data}, journal = {Silico Biol.}, volume = {5}, number = {2}, pages = {179--185}, year = {2004}, url = {http://content.iospress.com/articles/in-silico-biology/isb00177}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/PruessKA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jbi/Martin-SanchezINMGLJAAB04, author = {Fernando Mart{\'{\i}}n{-}S{\'{a}}nchez and Ilias Iakovidis and S. N{\o}rager and Victor Maojo and Piet C. de Groen and Johan van der Lei and T. Jones and Klaus Abraham{-}Fuchs and Rolf Apweiler and Ankica Babic}, title = {Synergy between medical informatics and bioinformatics: facilitating genomic medicine for future health care}, journal = {J. Biomed. Informatics}, volume = {37}, number = {1}, pages = {30--42}, year = {2004}, url = {https://doi.org/10.1016/j.jbi.2003.09.003}, doi = {10.1016/J.JBI.2003.09.003}, timestamp = {Tue, 16 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jbi/Martin-SanchezINMGLJAAB04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/PruessKA04, author = {Manuela Pruess and Paul J. Kersey and Rolf Apweiler}, title = {Integrating Genomic and Proteomic Data: The Integr8 Project}, journal = {J. Integr. Bioinform.}, volume = {1}, number = {1}, year = {2004}, url = {https://doi.org/10.2390/biecoll-jib-2004-9}, doi = {10.2390/BIECOLL-JIB-2004-9}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/PruessKA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KulikovaAABBBBCDEFGHKLLLLMMNSSSTTVWZA04, author = {Tamara Kulikova and Philippe Aldebert and Nicola Althorpe and Wendy Baker and Kirsty Bates and Paul Browne and Alexandra van den Broek and Guy Cochrane and Karyn Duggan and Ruth Y. Eberhardt and Nadeem Faruque and Maria Garcia{-}Pastor and Nicola Harte and Carola Kanz and Rasko Leinonen and Quan Lin and Vincent Lombard and Rodrigo Lopez and Renato Mancuso and Michelle McHale and Francesco Nardone and Ville Silventoinen and Peter Stoehr and Guenter Stoesser and Mary Ann Tuli and Katerina Tzouvara and Robert Vaughan and Dan Wu and Weimin Zhu and Rolf Apweiler}, title = {The {EMBL} Nucleotide Sequence Database}, journal = {Nucleic Acids Res.}, volume = {32}, number = {Database-Issue}, pages = {27--30}, year = {2004}, url = {https://doi.org/10.1093/nar/gkh120}, doi = {10.1093/NAR/GKH120}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KulikovaAABBBBCDEFGHKLLLLMMNSSSTTVWZA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ApweilerBWBBFGHLMMNORY04, author = {Rolf Apweiler and Amos Bairoch and Cathy H. Wu and Winona C. Barker and Brigitte Boeckmann and Serenella Ferro and Elisabeth Gasteiger and Hongzhan Huang and Rodrigo Lopez and Michele Magrane and Maria Jesus Martin and Darren A. Natale and Claire O'Donovan and Nicole Redaschi and Lai{-}Su L. Yeh}, title = {UniProt: the Universal Protein knowledgebase}, journal = {Nucleic Acids Res.}, volume = {32}, number = {Database-Issue}, pages = {115--119}, year = {2004}, url = {https://doi.org/10.1093/nar/gkh131}, doi = {10.1093/NAR/GKH131}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ApweilerBWBBFGHLMMNORY04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CamonMBLDMBHLA04, author = {Evelyn Camon and Michele Magrane and Daniel Barrell and Vivian Lee and Emily Dimmer and John Maslen and David Binns and Nicola Harte and Rodrigo Lopez and Rolf Apweiler}, title = {The Gene Ontology Annotation {(GOA)} Database: sharing knowledge in Uniprot with Gene Ontology}, journal = {Nucleic Acids Res.}, volume = {32}, number = {Database-Issue}, pages = {262--266}, year = {2004}, url = {https://doi.org/10.1093/nar/gkh021}, doi = {10.1093/NAR/GKH021}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CamonMBLDMBHLA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/FleischmannDDFBABSTA04, author = {Astrid Fleischmann and Michael Darsow and Kirill Degtyarenko and Wolfgang Fleischmann and Sin{\'{e}}ad Boyce and Kristian B. Axelsen and Amos Bairoch and Dietmar Schomburg and Keith F. Tipton and Rolf Apweiler}, title = {IntEnz, the integrated relational enzyme database}, journal = {Nucleic Acids Res.}, volume = {32}, number = {Database-Issue}, pages = {434--437}, year = {2004}, url = {https://doi.org/10.1093/nar/gkh119}, doi = {10.1093/NAR/GKH119}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/FleischmannDDFBABSTA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HermjakobMLMKOVRRVMABCSA04, author = {Henning Hermjakob and Luisa Montecchi{-}Palazzi and Chris Lewington and Sugath Mudali and Samuel Kerrien and Sandra E. Orchard and Martin Vingron and Bernd Roechert and Peter Roepstorff and Alfonso Valencia and Hanah Margalit and John Armstrong and Amos Bairoch and Gianni Cesareni and David James Sherman and Rolf Apweiler}, title = {IntAct: an open source molecular interaction database}, journal = {Nucleic Acids Res.}, volume = {32}, number = {Database-Issue}, pages = {452--455}, year = {2004}, url = {https://doi.org/10.1093/nar/gkh052}, doi = {10.1093/NAR/GKH052}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HermjakobMLMKOVRRVMABCSA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ismb/WieserKA04, author = {Daniela Wieser and Ernst Kretschmann and Rolf Apweiler}, title = {Filtering erroneous protein annotation}, booktitle = {Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, Glasgow, UK, July 31-August 4, 2004}, pages = {342--347}, year = {2004}, url = {https://doi.org/10.1093/bioinformatics/bth938}, doi = {10.1093/BIOINFORMATICS/BTH938}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ismb/WieserKA04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/CamonBLDA03, author = {Evelyn Camon and Daniel Barrell and Vivian Lee and Emily Dimmer and Rolf Apweiler}, title = {The Gene Ontology Annotation {(GOA)} Database - An integrated resource of {GO} annotations to the UniProt Knowledgebase}, journal = {Silico Biol.}, volume = {4}, number = {1}, pages = {5--6}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00112}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/CamonBLDA03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BrooksbankCHMMMOPTABBHLSSC03, author = {Catherine Brooksbank and Evelyn Camon and Midori A. Harris and Michele Magrane and Maria Jesus Martin and Nicola J. Mulder and Claire O'Donovan and Helen E. Parkinson and Mary Ann Tuli and Rolf Apweiler and Ewan Birney and Alvis Brazma and Kim Henrick and Rodrigo Lopez and Guenter Stoesser and Peter Stoehr and Graham Cameron}, title = {The European Bioinformatics Institute's data resources}, journal = {Nucleic Acids Res.}, volume = {31}, number = {1}, pages = {43--50}, year = {2003}, url = {https://doi.org/10.1093/nar/gkg066}, doi = {10.1093/NAR/GKG066}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BrooksbankCHMMMOPTABBHLSSC03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MulderAABBBBBBBBCCDDFFGHHHKKKLLLSOPPPSSSVZ03, author = {Nicola J. Mulder and Rolf Apweiler and Terri K. Attwood and Amos Bairoch and Daniel Barrell and Alex Bateman and David Binns and Margaret Biswas and Paul Bradley and Peer Bork and Philipp Bucher and Richard R. Copley and Emmanuel Courcelle and Ujjwal Das and Richard Durbin and Laurent Falquet and Wolfgang Fleischmann and Sam Griffiths{-}Jones and Daniel H. Haft and Nicola Harte and Nicolas Hulo and Daniel Kahn and Alexander Kanapin and Maria Krestyaninova and Rodrigo Lopez and Ivica Letunic and David Lonsdale and Ville Silventoinen and Sandra E. Orchard and Marco Pagni and David Peyruc and Chris P. Ponting and Jeremy D. Selengut and Florence Servant and Christian J. A. Sigrist and Robert Vaughan and Evgeni M. Zdobnov}, title = {The InterPro Database, 2003 brings increased coverage and new features}, journal = {Nucleic Acids Res.}, volume = {31}, number = {1}, pages = {315--318}, year = {2003}, url = {https://doi.org/10.1093/nar/gkg046}, doi = {10.1093/NAR/GKG046}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/MulderAABBBBBBBBCCDDFFGHHHKKKLLLSOPPPSSSVZ03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BoeckmannBABEGMMOPPS03, author = {Brigitte Boeckmann and Amos Bairoch and Rolf Apweiler and Marie{-}Claude Blatter and Anne Estreicher and Elisabeth Gasteiger and Maria Jesus Martin and Karine Michoud and Claire O'Donovan and Isabelle Phan and Sandrine Pilbout and Michel Schneider}, title = {The {SWISS-PROT} protein knowledgebase and its supplement TrEMBL in 2003}, journal = {Nucleic Acids Res.}, volume = {31}, number = {1}, pages = {365--370}, year = {2003}, url = {https://doi.org/10.1093/nar/gkg095}, doi = {10.1093/NAR/GKG095}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BoeckmannBABEGMMOPPS03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KriventsevaSA03, author = {Evgenia V. Kriventseva and Florence Servant and Rolf Apweiler}, title = {Improvements to CluSTr: the database of SWISS-PROT+TrEMBL protein clusters}, journal = {Nucleic Acids Res.}, volume = {31}, number = {1}, pages = {388--389}, year = {2003}, url = {https://doi.org/10.1093/nar/gkg035}, doi = {10.1093/NAR/GKG035}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KriventsevaSA03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PruessFKKKKMMPSA03, author = {Manuela Pruess and Wolfgang Fleischmann and Alexander Kanapin and Youla Karavidopoulou and Paul J. Kersey and Evgenia V. Kriventseva and Virginie Mittard and Nicola J. Mulder and Isabelle Phan and Florence Servant and Rolf Apweiler}, title = {The Proteome Analysis database: a tool for the in silico analysis of whole proteomes}, journal = {Nucleic Acids Res.}, volume = {31}, number = {1}, pages = {414--417}, year = {2003}, url = {https://doi.org/10.1093/nar/gkg105}, doi = {10.1093/NAR/GKG105}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PruessFKKKKMMPSA03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/MulderAABBBBBBBCCDFFGGHHHKKKLLOPPPSS02, author = {Nicola J. Mulder and Rolf Apweiler and Terri K. Attwood and Amos Bairoch and Alex Bateman and David Binns and Margaret Biswas and Paul Bradley and Peer Bork and Philipp Bucher and Richard R. Copley and Emmanuel Courcelle and Richard Durbin and Laurent Falquet and Wolfgang Fleischmann and J{\'{e}}r{\^{o}}me Gouzy and Sam Griffiths{-}Jones and Daniel H. Haft and Henning Hermjakob and Nicolas Hulo and Daniel Kahn and Alexander Kanapin and Maria Krestyaninova and Rodrigo Lopez and Ivica Letunic and Sue Orchard and Marco Pagni and David Peyruc and Chris P. Ponting and Florence Servant and Christian J. A. Sigrist}, title = {InterPro: An Integrated Documentation Resource for Protein Families, Domains and Functional Sites}, journal = {Briefings Bioinform.}, volume = {3}, number = {3}, pages = {225--235}, year = {2002}, url = {https://doi.org/10.1093/bib/3.3.225}, doi = {10.1093/BIB/3.3.225}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bib/MulderAABBBBBBBCCDFFGGHHHKKKLLOPPPSS02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/ODonovanMGGBA02, author = {Claire O'Donovan and Maria Jesus Martin and Alexandre Gattiker and Elisabeth Gasteiger and Amos Bairoch and Rolf Apweiler}, title = {High-quality Protein Knowledge Resource: {SWISS-PROT} and TrEMBL}, journal = {Briefings Bioinform.}, volume = {3}, number = {3}, pages = {275--284}, year = {2002}, url = {https://doi.org/10.1093/bib/3.3.275}, doi = {10.1093/BIB/3.3.275}, timestamp = {Thu, 04 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/ODonovanMGGBA02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/BiswasOCFKKKKMMPSA02, author = {Margaret Biswas and Joseph F. O'Rourke and Evelyn Camon and Gillian Fraser and Alexander Kanapin and Youla Karavidopoulou and Paul J. Kersey and Evgenia V. Kriventseva and Virginie Mittard and Nicola J. Mulder and Isabelle Phan and Florence Servant and Rolf Apweiler}, title = {Applications of InterPro in Protein Annotation and Genome Analysis}, journal = {Briefings Bioinform.}, volume = {3}, number = {3}, pages = {285--295}, year = {2002}, url = {https://doi.org/10.1093/bib/3.3.285}, doi = {10.1093/BIB/3.3.285}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/BiswasOCFKKKKMMPSA02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MollerCA02, author = {Steffen M{\"{o}}ller and Michael D. R. Croning and Rolf Apweiler}, title = {Erratum: Evaluation of methods for the prediction of membrane spanning regions}, journal = {Bioinform.}, volume = {18}, number = {1}, pages = {218}, year = {2002}, url = {https://doi.org/10.1093/bioinformatics/18.1.218}, doi = {10.1093/BIOINFORMATICS/18.1.218}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MollerCA02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ZdobnovLAE02, author = {Evgeni M. Zdobnov and Rodrigo Lopez and Rolf Apweiler and Thure Etzold}, title = {The {EBI} {SRS} server-recent developments}, journal = {Bioinform.}, volume = {18}, number = {2}, pages = {368--373}, year = {2002}, url = {https://doi.org/10.1093/bioinformatics/18.2.368}, doi = {10.1093/BIOINFORMATICS/18.2.368}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/ZdobnovLAE02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KanapinABFKKKMMOPSZ02, author = {Alexander Kanapin and Rolf Apweiler and Margaret Biswas and Wolfgang Fleischmann and Youla Karavidopoulou and Paul J. Kersey and Evgenia V. Kriventseva and Virginie Mittard and Nicola J. Mulder and Thomas M. Oinn and Isabelle Phan and Florence Servant and Evgeni M. Zdobnov}, title = {Interactive InterPro-based comparisons of proteins in whole genomes}, journal = {Bioinform.}, volume = {18}, number = {2}, pages = {374--375}, year = {2002}, url = {https://doi.org/10.1093/bioinformatics/18.2.374}, doi = {10.1093/BIOINFORMATICS/18.2.374}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KanapinABFKKKMMOPSZ02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ZdobnovLAE02a, author = {Evgeni M. Zdobnov and Rodrigo Lopez and Rolf Apweiler and Thure Etzold}, title = {The {EBI} {SRS} server-new features}, journal = {Bioinform.}, volume = {18}, number = {8}, pages = {1149--1150}, year = {2002}, url = {https://doi.org/10.1093/bioinformatics/18.8.1149}, doi = {10.1093/BIOINFORMATICS/18.8.1149}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/ZdobnovLAE02a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/candc/MollerSA02, author = {Steffen M{\"{o}}ller and Michael Schroeder and Rolf Apweiler}, title = {Consistent Integration of Non-reliable Heterogeneous Information Resources Applied to the Annotation of Transmembrane Proteins}, journal = {Comput. Chem.}, volume = {26}, number = {1}, pages = {41--49}, year = {2002}, url = {https://doi.org/10.1016/S0097-8485(01)00098-5}, doi = {10.1016/S0097-8485(01)00098-5}, timestamp = {Mon, 18 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/candc/MollerSA02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/datascience/MagraneA02, author = {Michele Magrane and Rolf Apweiler}, title = {Organisation and standardisation of information in SWISS{\_}PROT and TrEMBL}, journal = {Data Sci. J.}, volume = {1}, number = {1}, pages = {13--18}, year = {2002}, url = {https://doi.org/10.2481/dsj.1.13}, doi = {10.2481/DSJ.1.13}, timestamp = {Tue, 30 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/datascience/MagraneA02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/dagstuhl/ApweilerBFKM02, author = {Rolf Apweiler and Margaret Biswas and Wolfgang Fleischmann and Evgenia V. Kriventseva and Nicola J. Mulder}, editor = {Julio Collado{-}Vides and Ralf Hofest{\"{a}}dt}, title = {Automation of Protein Sequence Characterization and Its Application in Whole Proteome Analysis}, booktitle = {Gene Regulations and Metabolism - Postgenomic Computational Approaches}, pages = {19--47}, publisher = {{MIT} Press}, year = {2002}, timestamp = {Tue, 20 Aug 2002 13:42:34 +0200}, biburl = {https://dblp.org/rec/conf/dagstuhl/ApweilerBFKM02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:books/wi/02/ZdobnovLAE02, author = {Evgeni M. Zdobnov and Rodrigo Lopez and Rolf Apweiler and Thure Etzold}, editor = {Christoph W. Sensen}, title = {Bioinformatics: Using the Molecular Biology Data}, booktitle = {Essentials of Genomics and Bioinformatics}, pages = {265--284}, publisher = {Wiley}, year = {2002}, url = {https://doi.org/10.1002/9783527612642.ch11}, doi = {10.1002/9783527612642.CH11}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/books/wi/02/ZdobnovLAE02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/Apweiler01, author = {Rolf Apweiler}, title = {Functional Information in {SWISS-PROT:} the Basis for Large-scale Characterisation of Protein Sequences}, journal = {Briefings Bioinform.}, volume = {2}, number = {1}, pages = {9--18}, year = {2001}, url = {https://doi.org/10.1093/bib/2.1.9}, doi = {10.1093/BIB/2.1.9}, timestamp = {Thu, 04 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/Apweiler01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ApweilerKJB01, author = {Rolf Apweiler and Paul J. Kersey and Vivien Junker and Amos Bairoch}, title = {Technical comment to "Database verification studies of {SWISS-PROT} and GenBank" by Karp et al}, journal = {Bioinform.}, volume = {17}, number = {6}, pages = {533--534}, year = {2001}, url = {https://doi.org/10.1093/bioinformatics/17.6.533}, doi = {10.1093/BIOINFORMATICS/17.6.533}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/ApweilerKJB01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MollerCA01, author = {Steffen M{\"{o}}ller and Michael D. R. Croning and Rolf Apweiler}, title = {Evaluation of methods for the prediction of membrane spanning regions}, journal = {Bioinform.}, volume = {17}, number = {7}, pages = {646--653}, year = {2001}, url = {https://doi.org/10.1093/bioinformatics/17.7.646}, doi = {10.1093/BIOINFORMATICS/17.7.646}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MollerCA01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ZdobnovA01, author = {Evgeni M. Zdobnov and Rolf Apweiler}, title = {InterProScan - an integration platform for the signature-recognition methods in InterPro}, journal = {Bioinform.}, volume = {17}, number = {9}, pages = {847--848}, year = {2001}, url = {https://doi.org/10.1093/bioinformatics/17.9.847}, doi = {10.1093/BIOINFORMATICS/17.9.847}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/ZdobnovA01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KretschmannFA01, author = {Ernst Kretschmann and Wolfgang Fleischmann and Rolf Apweiler}, title = {Automatic rule generation for protein annotation with the {C4.5} data mining algorithm applied on {SWISS-PROT}}, journal = {Bioinform.}, volume = {17}, number = {10}, pages = {920--926}, year = {2001}, url = {https://doi.org/10.1093/bioinformatics/17.10.920}, doi = {10.1093/BIOINFORMATICS/17.10.920}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KretschmannFA01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KriventsevaFZA01, author = {Evgenia V. Kriventseva and Wolfgang Fleischmann and Evgeni M. Zdobnov and Rolf Apweiler}, title = {CluSTr: a database of clusters of SWISS-PROT+TrEMBL proteins}, journal = {Nucleic Acids Res.}, volume = {29}, number = {1}, pages = {33--36}, year = {2001}, url = {https://doi.org/10.1093/nar/29.1.33}, doi = {10.1093/NAR/29.1.33}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/KriventsevaFZA01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ApweilerABBBBBCCCDFFGHHJKKKLMMOPSSZ01, author = {Rolf Apweiler and Terri K. Attwood and Amos Bairoch and Alex Bateman and Ewan Birney and Margaret Biswas and Philipp Bucher and Lorenzo Cerutti and Florence Corpet and Michael D. R. Croning and Richard Durbin and Laurent Falquet and Wolfgang Fleischmann and J{\'{e}}r{\^{o}}me Gouzy and Henning Hermjakob and Nicolas Hulo and Inge Jonassen and Daniel Kahn and Alexander Kanapin and Youla Karavidopoulou and Rodrigo Lopez and Beate Marx and Nicola J. Mulder and Thomas M. Oinn and Marco Pagni and Florence Servant and Christian J. A. Sigrist and Evgeni M. Zdobnov}, title = {The InterPro database, an integrated documentation resource for protein families, domains and functional sites}, journal = {Nucleic Acids Res.}, volume = {29}, number = {1}, pages = {37--40}, year = {2001}, url = {https://doi.org/10.1093/nar/29.1.37}, doi = {10.1093/NAR/29.1.37}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/ApweilerABBBBBCCCDFFGHHJKKKLMMOPSSZ01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ApweilerBFKKKKMMPZ01, author = {Rolf Apweiler and Margaret Biswas and Wolfgang Fleischmann and Alexander Kanapin and Youla Karavidopoulou and Paul J. Kersey and Evgenia V. Kriventseva and Virginie Mittard and Nicola J. Mulder and Isabelle Phan and Evgeni M. Zdobnov}, title = {Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes}, journal = {Nucleic Acids Res.}, volume = {29}, number = {1}, pages = {44--48}, year = {2001}, url = {https://doi.org/10.1093/nar/29.1.44}, doi = {10.1093/NAR/29.1.44}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/ApweilerBFKKKKMMPZ01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/KretschmannA01, author = {Ernst Kretschmann and Rolf Apweiler}, editor = {Edgar Wingender}, title = {Automatic rule generation for protein annotation with the {C4.5} data-mining algorithm applied on peptides in Ensembl}, booktitle = {Computer science and biology: Proceedings of the German Conference on Bioinformatics, {GCB} 2001, October 7-10, 2001, Braunschweig, Germany}, pages = {53--57}, publisher = {German Research Center for Biotechnology}, year = {2001}, timestamp = {Tue, 15 Mar 2005 13:06:29 +0100}, biburl = {https://dblp.org/rec/conf/gcb/KretschmannA01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/FleischmannDDA01, author = {Astrid Fleischmann and Michael Darsow and Kirill Degtyarenko and Rolf Apweiler}, editor = {Edgar Wingender}, title = {IntEnz - The Enzyme Database in Oracle}, booktitle = {Computer science and biology: Proceedings of the German Conference on Bioinformatics, {GCB} 2001, October 7-10, 2001, Braunschweig, Germany}, pages = {148--149}, publisher = {German Research Center for Biotechnology}, year = {2001}, timestamp = {Tue, 15 Mar 2005 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gcb/FleischmannDDA01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/RunteHA01, author = {Kai J. Runte and Henning Hermjakob and Rolf Apweiler}, editor = {Edgar Wingender}, title = {Towards a New Curation Environment for the TrEMBL Database}, booktitle = {Computer science and biology: Proceedings of the German Conference on Bioinformatics, {GCB} 2001, October 7-10, 2001, Braunschweig, Germany}, pages = {220}, publisher = {German Research Center for Biotechnology}, year = {2001}, timestamp = {Tue, 15 Mar 2005 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gcb/RunteHA01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MenneHA00, author = {Kerstin M. L. Menne and Henning Hermjakob and Rolf Apweiler}, title = {A comparison of signal sequence prediction methods using a test set of signal peptides}, journal = {Bioinform.}, volume = {16}, number = {8}, pages = {741--742}, year = {2000}, url = {https://doi.org/10.1093/bioinformatics/16.8.741}, doi = {10.1093/BIOINFORMATICS/16.8.741}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MenneHA00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KerseyHA00, author = {Paul J. Kersey and Henning Hermjakob and Rolf Apweiler}, title = {{VARSPLIC:} alternatively-spliced protein sequences derived from {SWISS-PROT} and TrEMBL}, journal = {Bioinform.}, volume = {16}, number = {11}, pages = {1048--1049}, year = {2000}, url = {https://doi.org/10.1093/bioinformatics/16.11.1048}, doi = {10.1093/BIOINFORMATICS/16.11.1048}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KerseyHA00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ApweilerABBBBBCCCDFFGHHJKKKLMMOPSSZ00, author = {Rolf Apweiler and Terri K. Attwood and Amos Bairoch and Alex Bateman and Ewan Birney and Margaret Biswas and Philipp Bucher and Lorenzo Cerutti and Florence Corpet and Michael D. R. Croning and Richard Durbin and Laurent Falquet and Wolfgang Fleischmann and J{\'{e}}r{\^{o}}me Gouzy and Henning Hermjakob and Nicolas Hulo and Inge Jonassen and Daniel Kahn and Alexander Kanapin and Youla Karavidopoulou and Rodrigo Lopez and Beate Marx and Nicola J. Mulder and Thomas M. Oinn and Marco Pagni and Florence Servant and Christian J. A. Sigrist and Evgeni M. Zdobnov}, title = {InterPro-an integrated documentation resource for protein families, domains and functional sites}, journal = {Bioinform.}, volume = {16}, number = {12}, pages = {1145--1150}, year = {2000}, url = {https://doi.org/10.1093/bioinformatics/16.12.1145}, doi = {10.1093/BIOINFORMATICS/16.12.1145}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/ApweilerABBBBBCCCDFFGHHJKKKLMMOPSSZ00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MollerKA00, author = {Steffen M{\"{o}}ller and Evgenia V. Kriventseva and Rolf Apweiler}, title = {A collection of well characterised integral membrane proteins}, journal = {Bioinform.}, volume = {16}, number = {12}, pages = {1159--1160}, year = {2000}, url = {https://doi.org/10.1093/bioinformatics/16.12.1159}, doi = {10.1093/BIOINFORMATICS/16.12.1159}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MollerKA00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BairochA00, author = {Amos Bairoch and Rolf Apweiler}, title = {The {SWISS-PROT} protein sequence database and its supplement TrEMBL in 2000}, journal = {Nucleic Acids Res.}, volume = {28}, number = {1}, pages = {45--48}, year = {2000}, url = {https://doi.org/10.1093/nar/28.1.45}, doi = {10.1093/NAR/28.1.45}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BairochA00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/ZdobnovLAE00, author = {Evgeni M. Zdobnov and Rodrigo Lopez and Rolf Apweiler and Thure Etzold}, editor = {Erich Bornberg{-}Bauer and Ursula Rost and Jens Stoye}, title = {The {EBI} {SRS} Server: Recent Developments}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2000), Heidelberg, October 5-7, 2000}, pages = {139--148}, publisher = {Logos Verlag}, year = {2000}, timestamp = {Fri, 22 Aug 2003 07:29:51 +0200}, biburl = {https://dblp.org/rec/conf/gcb/ZdobnovLAE00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/BiswasAFKKKKMMOPZ00, author = {Margaret Biswas and Rolf Apweiler and Wolfgang Fleischmann and Alexander Kanapin and Youla Karavidopoulou and Paul J. Kersey and Evgenia V. Kriventseva and Virginie Mittard and Nicola J. Mulder and Thomas M. Oinn and Isabelle Phan and Evgeni M. Zdobnov}, editor = {Erich Bornberg{-}Bauer and Ursula Rost and Jens Stoye}, title = {Proteome Analysis: Application of InterPro and CluSTr for the Functional Classification of Proteins in Whole Genomes}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2000), Heidelberg, October 5-7, 2000}, pages = {149--158}, publisher = {Logos Verlag}, year = {2000}, timestamp = {Mon, 01 Feb 2016 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gcb/BiswasAFKKKKMMOPZ00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MollerLFA99, author = {Steffen M{\"{o}}ller and Ulf Leser and Wolfgang Fleischmann and Rolf Apweiler}, title = {EDITtoTrEMBL: a distributed approach to high-quality automated protein sequence annotation}, journal = {Bioinform.}, volume = {15}, number = {3}, pages = {219--227}, year = {1999}, url = {https://doi.org/10.1093/bioinformatics/15.3.219}, doi = {10.1093/BIOINFORMATICS/15.3.219}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MollerLFA99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/FleischmannMGA99, author = {Wolfgang Fleischmann and Steffen M{\"{o}}ller and Alain Gateau and Rolf Apweiler}, title = {A novel method for automatic functional annotation of proteins}, journal = {Bioinform.}, volume = {15}, number = {3}, pages = {228--233}, year = {1999}, url = {https://doi.org/10.1093/bioinformatics/15.3.228}, doi = {10.1093/BIOINFORMATICS/15.3.228}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/FleischmannMGA99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ODonovanMGCA99, author = {Claire O'Donovan and Maria Jesus Martin and Eric Gl{\'{e}}met and Jean{-}Jacques Codani and Rolf Apweiler}, title = {Removing redundancy in {SWISS-PROT} and TrEMBL}, journal = {Bioinform.}, volume = {15}, number = {3}, pages = {258--259}, year = {1999}, url = {https://doi.org/10.1093/bioinformatics/15.3.258}, doi = {10.1093/BIOINFORMATICS/15.3.258}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/ODonovanMGCA99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/HermjakobFA99, author = {Henning Hermjakob and Wolfgang Fleischmann and Rolf Apweiler}, title = {Swissknife - 'lazy parsing' of {SWISS-PROT} entries}, journal = {Bioinform.}, volume = {15}, number = {9}, pages = {771--772}, year = {1999}, url = {https://doi.org/10.1093/bioinformatics/15.9.771}, doi = {10.1093/BIOINFORMATICS/15.9.771}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/HermjakobFA99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/JunkerAB99, author = {Vivien L. Junker and Rolf Apweiler and Amos Bairoch}, title = {Representation of functional information in the {SWISS-PROT} Data Bank}, journal = {Bioinform.}, volume = {15}, number = {12}, pages = {1066--1067}, year = {1999}, url = {https://doi.org/10.1093/bioinformatics/15.12.1066}, doi = {10.1093/BIOINFORMATICS/15.12.1066}, timestamp = {Fri, 28 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/JunkerAB99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BairochA99, author = {Amos Bairoch and Rolf Apweiler}, title = {The {SWISS-PROT} protein sequence data bank and its supplement TrEMBL in 1999}, journal = {Nucleic Acids Res.}, volume = {27}, number = {1}, pages = {49--54}, year = {1999}, url = {https://doi.org/10.1093/nar/27.1.49}, doi = {10.1093/NAR/27.1.49}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BairochA99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/MollerWKSGA99, author = {Steffen M{\"{o}}ller and Michael J. Wise and David P. Kreil and Michael Schroeder and D. Gilbest and Rolf Apweiler}, title = {Facilitating context-sensitive queries: {A} tool to rephrase {SWISS-PROT}}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1999, October 4-6, 1999, Hannover, Germany}, pages = {216--218}, year = {1999}, timestamp = {Fri, 02 Aug 2019 15:48:16 +0200}, biburl = {https://dblp.org/rec/conf/gcb/MollerWKSGA99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/VeldsHA99, author = {Arno Velds and Henning Hermjakob and Rolf Apweiler}, title = {Feature Propagation - Semi Automatic transfer of position dependent {SWISS-PROT} annotation}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1999, October 4-6, 1999, Hannover, Germany}, pages = {229--230}, year = {1999}, timestamp = {Fri, 02 Aug 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/VeldsHA99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BairochA98, author = {Amos Bairoch and Rolf Apweiler}, title = {The {SWISS-PROT} protein sequence data bank and its supplement TrEMBL in 1998}, journal = {Nucleic Acids Res.}, volume = {26}, number = {1}, pages = {38--42}, year = {1998}, url = {https://doi.org/10.1093/nar/26.1.38}, doi = {10.1093/NAR/26.1.38}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BairochA98.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/FleischmannMGA98, author = {Wolfgang Fleischmann and Steffen M{\"{o}}ller and Alain Gateau and Rolf Apweiler}, title = {A novel method for automatic and reliable functional annotation of proteins}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1998, University of Cologne, Germany, October 1998}, publisher = {Oxford University Press}, year = {1998}, timestamp = {Fri, 02 Aug 2019 15:48:14 +0200}, biburl = {https://dblp.org/rec/conf/gcb/FleischmannMGA98.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/HermjakobOMLA98, author = {Henning Hermjakob and Claire O'Donovan and Maria Jesus Martin and Fiona Lang and Rolf Apweiler}, title = {{SPTR:} {A} comprehensive, non redundant and up-to-date view of the protein sequence world}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1998, University of Cologne, Germany, October 1998}, publisher = {Oxford University Press}, year = {1998}, timestamp = {Fri, 02 Aug 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/HermjakobOMLA98.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/MollerLFA98, author = {Steffen M{\"{o}}ller and Ulf Leser and Wolfgang Fleischmann and Rolf Apweiler}, title = {EDITtoTrEMBL: {A} distributed approach to high-quality automated protein sequence annotation}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1998, University of Cologne, Germany, October 1998}, publisher = {Oxford University Press}, year = {1998}, timestamp = {Fri, 02 Aug 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/MollerLFA98.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/ODonovanMGCA98, author = {Claire O'Donovan and Maria Jesus Martin and Eric Gl{\'{e}}met and Jean{-}Jacques Codani and Rolf Apweiler}, title = {Removing Redundancy in {SWISS-PROT} and TrEMBL}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1998, University of Cologne, Germany, October 1998}, publisher = {Oxford University Press}, year = {1998}, timestamp = {Fri, 02 Aug 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/ODonovanMGCA98.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BairochA97, author = {Amos Bairoch and Rolf Apweiler}, title = {The {SWISS-PROT} protein sequence data bank and its supplement TrEMBL}, journal = {Nucleic Acids Res.}, volume = {25}, number = {1}, pages = {31--36}, year = {1997}, url = {https://doi.org/10.1093/nar/25.1.31}, doi = {10.1093/NAR/25.1.31}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BairochA97.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ismb/ApweilerGCMJOLMKB97, author = {Rolf Apweiler and Alain Gateau and Sergio Contrino and Maria Jesus Martin and Vivien Junker and Claire O'Donovan and Fiona Lang and Nicoletta Mitaritonna and Stephanie Kappus and Amos Bairoch}, editor = {Terry Gaasterland and Peter D. Karp and Kevin Karplus and Christos A. Ouzounis and Chris Sander and Alfonso Valencia}, title = {Protein Sequence Annotation in the Genome Era: The Annotation Concept of {SWISS-PROT} + {TREMBL}}, booktitle = {Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology, Halkidiki, Greece, June 21-26, 1997}, pages = {33--43}, publisher = {{AAAI}}, year = {1997}, url = {http://www.aaai.org/Library/ISMB/1997/ismb97-004.php}, timestamp = {Thu, 13 Dec 2012 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ismb/ApweilerGCMJOLMKB97.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BairochA96, author = {Amos Bairoch and Rolf Apweiler}, title = {The {SWISS-PROT} protein sequence data bank and its new supplement {TREMBL}}, journal = {Nucleic Acids Res.}, volume = {24}, number = {1}, pages = {21--25}, year = {1996}, url = {https://doi.org/10.1093/nar/24.1.21}, doi = {10.1093/NAR/24.1.21}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BairochA96.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/ApweilerJGOLB96a, author = {Rolf Apweiler and Vivien Junker and Alain Gateau and Claire O'Donovan and Fiona Lang and Amos Bairoch}, title = {New Developments in the Linking of Biological Databases and Computer-Generation of Annotation}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1996, Leipzig, Germany, September 30 - October 2, 1996}, pages = {29--34}, year = {1996}, timestamp = {Sat, 07 Sep 2019 11:59:23 +0200}, biburl = {https://dblp.org/rec/conf/gcb/ApweilerJGOLB96a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/ApweilerJGOLB96, author = {Rolf Apweiler and Vivien Junker and Alain Gateau and Claire O'Donovan and Fiona Lang and Amos Bairoch}, editor = {Ralf Hofest{\"{a}}dt and Thomas Lengauer and Markus L{\"{o}}ffler and Dietmar Schomburg}, title = {New Developments in Linking of Biological Databases and Computer-Generation of Annotations: {SWISS-PROT} and Its Computer-Annotated Supplement {TREMBL}}, booktitle = {Bioinformatics, German Conference on Bioinformatics, Leipzig, Germany, September 30 - October 2, 1996, Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {1278}, pages = {44--51}, publisher = {Springer}, year = {1996}, url = {https://doi.org/10.1007/BFb0033202}, doi = {10.1007/BFB0033202}, timestamp = {Tue, 14 May 2019 10:00:42 +0200}, biburl = {https://dblp.org/rec/conf/gcb/ApweilerJGOLB96.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.