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ORCIDBibTeX records: Carol J. Bult
@article{DBLP:journals/nar/PerovaMMLHFMNBKBPG23,
author = {Zinaida Perova and
Mauricio Mart{\'{\i}}nez and
Tushar Mandloi and
Federico L{\'{o}}pez{-}G{\'{o}}mez and
Csaba Halmagyi and
Alex Follette and
Jeremy C. Mason and
Steven Newhauser and
Dale A. Begley and
Debra M. Krupke and
Carol J. Bult and
Helen E. Parkinson and
Tudor Groza},
title = {{PDCM} Finder: an open global research platform for patient-derived
cancer models},
journal = {Nucleic Acids Res.},
volume = {51},
number = {{D1}},
pages = {1360--1366},
year = {2023},
url = {https://doi.org/10.1093/nar/gkac1021},
doi = {10.1093/NAR/GKAC1021},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PerovaMMLHFMNBKBPG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/WileyFGRSWBCDGG22,
author = {Ken Wiley and
Laura Findley and
Madison Goldrich and
Tejinder K. Rakhra{-}Burris and
Ana Stevens and
Pamela Williams and
Carol J. Bult and
Rex L. Chisholm and
Patricia Deverka and
Geoffrey S. Ginsburg and
Eric D. Green and
Gail P. Jarvik and
George A. Mensah and
Erin Ramos and
Mary V. Relling and
Dan M. Roden and
Robb Rowley and
Gil Alterovitz and
Samuel J. Aronson and
Lisa Bastarache and
James J. Cimino and
Erin L. Crowgey and
Guilherme Del Fiol and
Robert R. Freimuth and
Mark A. Hoffman and
Janina M. Jeff and
Kevin B. Johnson and
Kensaku Kawamoto and
Subha Madhavan and
Eneida A. Mendon{\c{c}}a and
Lucila Ohno{-}Machado and
Siddharth Pratap and
Casey Overby Taylor and
Marylyn D. Ritchie and
Nephi Walton and
Chunhua Weng and
Teresa Zayas{-}Cab{\'{a}}n and
Teri A. Manolio and
Marc S. Williams},
title = {A research agenda to support the development and implementation of
genomics-based clinical informatics tools and resources},
journal = {J. Am. Medical Informatics Assoc.},
volume = {29},
number = {8},
pages = {1342--1349},
year = {2022},
url = {https://doi.org/10.1093/jamia/ocac057},
doi = {10.1093/JAMIA/OCAC057},
timestamp = {Mon, 08 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/WileyFGRSWBCDGG22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlakeBKRSBABBBB21,
author = {Judith A. Blake and
Richard M. Baldarelli and
James A. Kadin and
Joel E. Richardson and
Cynthia L. Smith and
Carol J. Bult and
Anna V. Anagnostopoulos and
Jon S. Beal and
Susan M. Bello and
Olin Blodgett and
Nancy E. Butler and
Jeff Campbell and
Karen R. Christie and
Lori E. Corbani and
Mary E. Dolan and
Harold J. Drabkin and
Mar{\'{\i}}a Flores and
Susan L. Giannatto and
Angelina Guerra and
Paul Hale and
David P. Hill and
Jonathan Judd and
Meiyee Law and
Monica McAndrews and
Dave Miers and
Cailey Mitchell and
Howie Motenko and
Li Ni and
Hiroaki Onda and
Janice Ormsby and
Michelle Perry and
Jill M. Recla and
David R. Shaw and
Dmitry Sitnikov and
Monika Tomczuk and
Laurens G. Wilming and
Yunxia Sophia Zhu},
title = {Mouse Genome Database {(MGD):} Knowledgebase for mouse-human comparative
biology},
journal = {Nucleic Acids Res.},
volume = {49},
number = {Database-Issue},
pages = {D981--D987},
year = {2021},
url = {https://doi.org/10.1093/nar/gkaa1083},
doi = {10.1093/NAR/GKAA1083},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlakeBKRSBABBBB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AgapiteAAAAABBB20,
author = {Julie Agapite and
Laurent{-}Philippe Albou and
Suzi A. Aleksander and
Joanna Argasinska and
Valerio Arnaboldi and
Helen Attrill and
Susan M. Bello and
Judith A. Blake and
Olin Blodgett and
Yvonne M. Bradford and
Carol J. Bult and
Scott Cain and
Brian R. Calvi and
Seth Carbon and
Juancarlos Chan and
Wen J. Chen and
J. Michael Cherry and
Jae{-}Hyoung Cho and
Karen R. Christie and
Madeline A. Crosby and
Jeff de Pons and
Mary E. Dolan and
Gilberto dos Santos and
Barbara Dunn and
Nathan A. Dunn and
Anne E. Eagle and
Dustin Ebert and
Stacia R. Engel and
David Fashena and
Ken Frazer and
Sibyl Gao and
Felix Gondwe and
Joshua L. Goodman and
L. Sian Gramates and
Christian A. Grove and
Todd W. Harris and
Marie{-}Claire Harrison and
Douglas G. Howe and
Kevin L. Howe and
Sagar Jha and
James A. Kadin and
Thomas C. Kaufman and
Patrick Kalita and
Kalpana Karra and
Ranjana Kishore and
Stanley J. F. Laulederkind and
Raymond Y. N. Lee and
Kevin A. MacPherson and
Steven J. Marygold and
Beverley Matthews and
Gillian H. Millburn and
Stuart R. Miyasato and
Sierra A. T. Moxon and
Hans{-}Michael M{\"{u}}ller and
Christopher J. Mungall and
Anushya Muruganujan and
Tremayne Mushayahama and
Robert S. Nash and
Patrick Ng and
Michael Paulini and
Norbert Perrimon and
Christian Pich and
Daniela Raciti and
Joel E. Richardson and
Matthew Russell and
Susan Russo Gelbart and
Leyla Ruzicka and
Kevin Schaper and
Mary Shimoyama and
Matt Simison and
Cynthia L. Smith and
David R. Shaw and
Ajay Shrivatsav and
Marek S. Skrzypek and
Jennifer R. Smith and
Paul W. Sternberg and
Christopher J. Tabone and
Paul D. Thomas and
Jyothi Thota and
Sabrina Toro and
Monika Tomczuk and
Marek Tutaj and
Monika Tutaj and
Jose{-}Maria Urbano and
Kimberly Van Auken and
Ceri E. Van Slyke and
Shur{-}Jen Wang and
Shuai Weng and
Monte Westerfield and
Gary Williams and
Edith D. Wong and
Adam Wright and
Karen Yook},
title = {Alliance of Genome Resources Portal: unified model organism research
platform},
journal = {Nucleic Acids Res.},
volume = {48},
number = {Database-Issue},
pages = {D650--D658},
year = {2020},
url = {https://doi.org/10.1093/nar/gkz813},
doi = {10.1093/NAR/GKZ813},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/AgapiteAAAAABBB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultBSKRG19,
author = {Carol J. Bult and
Judith A. Blake and
Cynthia L. Smith and
James A. Kadin and
Joel E. Richardson and
The Mouse Genome Database Group},
title = {Mouse Genome Database {(MGD)} 2019},
journal = {Nucleic Acids Res.},
volume = {47},
number = {Database-Issue},
pages = {D801--D806},
year = {2019},
url = {https://doi.org/10.1093/nar/gky1056},
doi = {10.1093/NAR/GKY1056},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultBSKRG19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PujarOFLMWGDBBB18,
author = {Shashikant Pujar and
Nuala A. O'Leary and
Catherine M. Farrell and
Jane E. Loveland and
Jonathan M. Mudge and
Craig Wallin and
Carlos Garc{\'{\i}}a{-}Gir{\'{o}}n and
Mark Diekhans and
If Barnes and
Ruth Bennett and
Andrew E. Berry and
Eric Cox and
Claire Davidson and
Tamara Goldfarb and
Jose M. Gonzalez and
Toby Hunt and
John Jackson and
Vinita S. Joardar and
Mike P. Kay and
Vamsi K. Kodali and
Fergal J. Martin and
Monica McAndrews and
Kelly M. McGarvey and
Michael R. Murphy and
Bhanu Rajput and
Sanjida H. Rangwala and
Lillian D. Riddick and
Ruth L. Seal and
Marie{-}Marthe Suner and
David Webb and
Yunxia Sophia Zhu and
Bronwen L. Aken and
Elspeth A. Bruford and
Carol J. Bult and
Adam Frankish and
Terence D. Murphy and
Kim D. Pruitt},
title = {Consensus coding sequence {(CCDS)} database: a standardized set of
human and mouse protein-coding regions supported by expert curation},
journal = {Nucleic Acids Res.},
volume = {46},
number = {Database-Issue},
pages = {D221--D228},
year = {2018},
url = {https://doi.org/10.1093/nar/gkx1031},
doi = {10.1093/NAR/GKX1031},
timestamp = {Thu, 29 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PujarOFLMWGDBBB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SmithBKRBG18,
author = {Cynthia L. Smith and
Judith A. Blake and
James A. Kadin and
Joel E. Richardson and
Carol J. Bult and
The Mouse Genome Database Group},
title = {Mouse Genome Database {(MGD)-2018:} knowledgebase for the laboratory
mouse},
journal = {Nucleic Acids Res.},
volume = {46},
number = {Database-Issue},
pages = {D836--D842},
year = {2018},
url = {https://doi.org/10.1093/nar/gkx1006},
doi = {10.1093/NAR/GKX1006},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SmithBKRBG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlakeEKRSBG17,
author = {Judith A. Blake and
Janan T. Eppig and
James A. Kadin and
Joel E. Richardson and
Cynthia L. Smith and
Carol J. Bult and
The Mouse Genome Database Group},
title = {Mouse Genome Database {(MGD)-2017:} community knowledge resource for
the laboratory mouse},
journal = {Nucleic Acids Res.},
volume = {45},
number = {Database-Issue},
pages = {D723--D729},
year = {2017},
url = {https://doi.org/10.1093/nar/gkw1040},
doi = {10.1093/NAR/GKW1040},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlakeEKRSBG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultEBKRG16,
author = {Carol J. Bult and
Janan T. Eppig and
Judith A. Blake and
James A. Kadin and
Joel E. Richardson},
title = {Mouse genome database 2016},
journal = {Nucleic Acids Res.},
volume = {44},
number = {Database-Issue},
pages = {840--847},
year = {2016},
url = {https://doi.org/10.1093/nar/gkv1211},
doi = {10.1093/NAR/GKV1211},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultEBKRG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/EppigBBKR15,
author = {Janan T. Eppig and
Judith A. Blake and
Carol J. Bult and
James A. Kadin and
Joel E. Richardson},
title = {The Mouse Genome Database {(MGD):} facilitating mouse as a model for
human biology and disease},
journal = {Nucleic Acids Res.},
volume = {43},
number = {Database-Issue},
pages = {726--736},
year = {2015},
url = {https://doi.org/10.1093/nar/gku967},
doi = {10.1093/NAR/GKU967},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/EppigBBKR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultKBRNSE15,
author = {Carol J. Bult and
Debra M. Krupke and
Dale A. Begley and
Joel E. Richardson and
Steven B. Neuhauser and
John P. Sundberg and
Janan T. Eppig},
title = {Mouse Tumor Biology {(MTB):} a database of mouse models for human
cancer},
journal = {Nucleic Acids Res.},
volume = {43},
number = {Database-Issue},
pages = {818--824},
year = {2015},
url = {https://doi.org/10.1093/nar/gku987},
doi = {10.1093/NAR/GKU987},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultKBRNSE15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NataleABBCCDDDHHMRRRRSSYZACGLSW14,
author = {Darren A. Natale and
Cecilia N. Arighi and
Judith A. Blake and
Carol J. Bult and
Karen R. Christie and
Julie Cowart and
Peter D'Eustachio and
Alexander D. Diehl and
Harold J. Drabkin and
Olivia Helfer and
Hongzhan Huang and
Anna Maria Masci and
Jia Ren and
Natalia V. Roberts and
Karen Ross and
Alan Ruttenberg and
Veronica Shamovsky and
Barry Smith and
Meher Shruti Yerramalla and
Jian Zhang and
Aisha AlJanahi and
Irem {\c{C}}elen and
Cynthia Gan and
Mengxi Lv and
Emily Schuster{-}Lezell and
Cathy H. Wu},
title = {Protein Ontology: a controlled structured network of protein entities},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {415--421},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt1173},
doi = {10.1093/NAR/GKT1173},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NataleABBCCDDDHHMRRRRSSYZACGLSW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlakeBEKR14,
author = {Judith A. Blake and
Carol J. Bult and
Janan T. Eppig and
James A. Kadin and
Joel E. Richardson},
title = {The Mouse Genome Database: integration of and access to knowledge
about the laboratory mouse},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {810--817},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt1225},
doi = {10.1093/NAR/GKT1225},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlakeBEKR14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GrubbBB14,
author = {Stephen C. Grubb and
Carol J. Bult and
Molly A. Bogue},
title = {Mouse Phenome Database},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {825--834},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt1159},
doi = {10.1093/NAR/GKT1159},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GrubbBB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultEBKR13,
author = {Carol J. Bult and
Janan T. Eppig and
Judith A. Blake and
James A. Kadin and
Joel E. Richardson},
title = {The Mouse Genome Database: Genotypes, Phenotypes, and Models of Human
Disease},
journal = {Nucleic Acids Res.},
volume = {41},
number = {Database-Issue},
pages = {885--891},
year = {2013},
url = {https://doi.org/10.1093/nar/gks1115},
doi = {10.1093/NAR/GKS1115},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultEBKR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/EppigBBKRG12,
author = {Janan T. Eppig and
Judith A. Blake and
Carol J. Bult and
James A. Kadin and
Joel E. Richardson},
title = {The Mouse Genome Database {(MGD):} comprehensive resource for genetics
and genomics of the laboratory mouse},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {881--886},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr974},
doi = {10.1093/NAR/GKR974},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/EppigBBKRG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MaddatuGBB12,
author = {Terry P. Maddatu and
Stephen C. Grubb and
Carol J. Bult and
Molly A. Bogue},
title = {Mouse Phenome Database {(MPD)}},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {887--894},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1061},
doi = {10.1093/NAR/GKR1061},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MaddatuGBB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/GuanGBWSHBHT12,
author = {Yuanfang Guan and
Dmitriy Gorenshteyn and
Margit Burmeister and
Aaron K. Wong and
John C. Schimenti and
Mary Ann Handel and
Carol J. Bult and
Matthew A. Hibbs and
Olga G. Troyanskaya},
title = {Tissue-Specific Functional Networks for Prioritizing Phenotype and
Disease Genes},
journal = {PLoS Comput. Biol.},
volume = {8},
number = {9},
year = {2012},
url = {https://doi.org/10.1371/journal.pcbi.1002694},
doi = {10.1371/JOURNAL.PCBI.1002694},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/GuanGBWSHBHT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NiBKRREB12,
author = {Li Ni and
Carol J. Bult and
James A. Kadin and
Joel E. Richardson and
Martin Ringwald and
Janan T. Eppig and
Judith A. Blake},
editor = {Ronald Cornet and
Robert Stevens},
title = {Using Biomedical Ontologies for Data Representation and Management
in the Mouse Genome Informatics {(MGI)} System},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_3.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:23 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NiBKRREB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GaudetBFSTABBBCCCCEGGGGHHIKLLKOORRRSSSTTWWY11,
author = {Pascale Gaudet and
Amos Bairoch and
Dawn Field and
Susanna{-}Assunta Sansone and
Chris F. Taylor and
Teresa K. Attwood and
Alex Bateman and
Judith A. Blake and
Carol J. Bult and
J. Michael Cherry and
Rex L. Chisholm and
Guy Cochrane and
Charles E. Cook and
Janan T. Eppig and
Michael Y. Galperin and
Robert Gentleman and
Carole A. Goble and
Takashi Gojobori and
John M. Hancock and
Douglas G. Howe and
Tadashi Imanishi and
Janet Kelso and
David Landsman and
Suzanna E. Lewis and
Ilene Karsch{-}Mizrachi and
Sandra E. Orchard and
B. F. Francis Ouellette and
Shoba Ranganathan and
Lorna J. Richardson and
Philippe Rocca{-}Serra and
Paul N. Schofield and
Damian Smedley and
Christopher Southan and
Tin Wee Tan and
Tatiana A. Tatusova and
Patricia L. Whetzel and
Owen White and
Chisato Yamasaki},
title = {Towards BioDBcore: a community-defined information specification for
biological databases},
journal = {Database J. Biol. Databases Curation},
volume = {2011},
year = {2011},
url = {https://doi.org/10.1093/database/baq027},
doi = {10.1093/DATABASE/BAQ027},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GaudetBFSTABBBCCCCEGGGGHHIKLLKOORRRSSSTTWWY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BultDENARRDSBW11,
author = {Carol J. Bult and
Harold J. Drabkin and
Alexei V. Evsikov and
Darren A. Natale and
Cecilia N. Arighi and
Natalia V. Roberts and
Alan Ruttenberg and
Peter D'Eustachio and
Barry Smith and
Judith A. Blake and
Cathy H. Wu},
title = {The Representation of Protein Complexes in the Protein Ontology {(PRO)}},
journal = {{BMC} Bioinform.},
volume = {12},
pages = {371},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-371},
doi = {10.1186/1471-2105-12-371},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BultDENARRDSBW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/MeehanCJBCB11,
author = {Terrence F. Meehan and
Christopher J. Carr and
Jeremy J. Jay and
Carol J. Bult and
Elissa J. Chesler and
Judith A. Blake},
title = {Autism candidate genes via mouse phenomics},
journal = {J. Biomed. Informatics},
volume = {44},
number = {Supplement-1},
pages = {S5--S11},
year = {2011},
url = {https://doi.org/10.1016/j.jbi.2011.03.003},
doi = {10.1016/J.JBI.2011.03.003},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/MeehanCJBCB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GaudetBFSTABBBCCCCEGGGGHHIKLLKOORRRSSSTTWWY11,
author = {Pascale Gaudet and
Amos Bairoch and
Dawn Field and
Susanna{-}Assunta Sansone and
Chris F. Taylor and
Teresa K. Attwood and
Alex Bateman and
Judith A. Blake and
Carol J. Bult and
J. Michael Cherry and
Rex L. Chisholm and
Guy Cochrane and
Charles E. Cook and
Janan T. Eppig and
Michael Y. Galperin and
Robert Gentleman and
Carole A. Goble and
Takashi Gojobori and
John M. Hancock and
Douglas G. Howe and
Tadashi Imanishi and
Janet Kelso and
David Landsman and
Suzanna E. Lewis and
Ilene Karsch{-}Mizrachi and
Sandra E. Orchard and
B. F. Francis Ouellette and
Shoba Ranganathan and
Lorna J. Richardson and
Philippe Rocca{-}Serra and
Paul N. Schofield and
Damian Smedley and
Christopher Southan and
Tin Wee Tan and
Tatiana A. Tatusova and
Patricia L. Whetzel and
Owen White and
Chisato Yamasaki},
title = {Towards BioDBcore: a community-defined information specification for
biological databases},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Database-Issue},
pages = {7--10},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq1173},
doi = {10.1093/NAR/GKQ1173},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GaudetBFSTABBBCCCCEGGGGHHIKLLKOORRRSSSTTWWY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NataleABBBCDDEHNRSZW11,
author = {Darren A. Natale and
Cecilia N. Arighi and
Winona C. Barker and
Judith A. Blake and
Carol J. Bult and
Michael Caudy and
Harold J. Drabkin and
Peter D'Eustachio and
Alexei V. Evsikov and
Hongzhan Huang and
Jules Nchoutmboube and
Natalia V. Roberts and
Barry Smith and
Jian Zhang and
Cathy H. Wu},
title = {The Protein Ontology: a structured representation of protein forms
and complexes},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Database-Issue},
pages = {539--545},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq907},
doi = {10.1093/NAR/GKQ907},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NataleABBBCDDEHNRSZW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlakeBKREG11,
author = {Judith A. Blake and
Carol J. Bult and
James A. Kadin and
Joel E. Richardson and
Janan T. Eppig},
title = {The Mouse Genome Database {(MGD):} premier model organism resource
for mammalian genomics and genetics},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Database-Issue},
pages = {842--848},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq1008},
doi = {10.1093/NAR/GKQ1008},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlakeBKREG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RingwaldIMSTKBEOBSMSLHBHS11,
author = {Martin Ringwald and
Vivek Iyer and
Jeremy C. Mason and
Kevin R. Stone and
Hamsa D. Tadepally and
James A. Kadin and
Carol J. Bult and
Janan T. Eppig and
Darren J. Oakley and
Sebastien Briois and
Elia Stupka and
Vincenza Maselli and
Damian Smedley and
Songyan Liu and
Jens Hansen and
Richard A. Baldock and
Geoffrey G. Hicks and
William C. Skarnes},
title = {The {IKMC} web portal: a central point of entry to data and resources
from the International Knockout Mouse Consortium},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Database-Issue},
pages = {849--855},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq879},
doi = {10.1093/NAR/GKQ879},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/RingwaldIMSTKBEOBSMSLHBHS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ArighiNBBCDDDEHRRSZW11,
author = {Cecilia N. Arighi and
Darren A. Natale and
Judith A. Blake and
Carol J. Bult and
Michael Caudy and
Alexander D. Diehl and
Harold J. Drabkin and
Peter D'Eustachio and
Alexei V. Evsikov and
Hongzhan Huang and
Natalia V. Roberts and
Alan Ruttenberg and
Barry Smith and
Jian Zhang and
Cathy H. Wu},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Protein-Centric Connection of Biomedical Knowledge: Protein Ontology
{(PRO)} Research and Annotation Tools},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper49.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ArighiNBBCDDDEHRRSZW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultKRBE10,
author = {Carol J. Bult and
James A. Kadin and
Joel E. Richardson and
Judith A. Blake and
Janan T. Eppig},
title = {The Mouse Genome Database: enhancements and updates},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {586--592},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp880},
doi = {10.1093/NAR/GKP880},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultKRBE10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ihi/DooreBB10,
author = {Stacy A. Doore and
M. Kate Beard and
Carol J. Bult},
editor = {Tiffany C. Veinot and
{\"{U}}mit V. {\c{C}}ataly{\"{u}}rek and
Gang Luo and
Henrique Andrade and
Neil R. Smalheiser},
title = {An ontology based personal exposure history},
booktitle = {{ACM} International Health Informatics Symposium, {IHI} 2010, Arlington,
VA, USA, November 11 - 12, 2010, Proceedings},
pages = {674--683},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1882992.1883097},
doi = {10.1145/1882992.1883097},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ihi/DooreBB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlakeBEKR09,
author = {Judith A. Blake and
Carol J. Bult and
Janan T. Eppig and
James A. Kadin and
Joel E. Richardson},
title = {The Mouse Genome Database genotypes: : phenotypes},
journal = {Nucleic Acids Res.},
volume = {37},
number = {Database-Issue},
pages = {712--719},
year = {2009},
url = {https://doi.org/10.1093/nar/gkn886},
doi = {10.1093/NAR/GKN886},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlakeBEKR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GrubbMBB09,
author = {Stephen C. Grubb and
Terry P. Maddatu and
Carol J. Bult and
Molly A. Bogue},
title = {Mouse Phenome Database},
journal = {Nucleic Acids Res.},
volume = {37},
number = {Database-Issue},
pages = {720--730},
year = {2009},
url = {https://doi.org/10.1093/nar/gkn778},
doi = {10.1093/NAR/GKN778},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GrubbMBB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultEKRB08,
author = {Carol J. Bult and
Janan T. Eppig and
James A. Kadin and
Joel E. Richardson and
Judith A. Blake},
title = {The Mouse Genome Database {(MGD):} mouse biology and model systems},
journal = {Nucleic Acids Res.},
volume = {36},
number = {Database-Issue},
pages = {724--728},
year = {2008},
url = {https://doi.org/10.1093/nar/gkm961},
doi = {10.1093/NAR/GKM961},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultEKRB08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/GuanMLLBT08,
author = {Yuanfang Guan and
Chad L. Myers and
Rong Lu and
Ihor Lemischka and
Carol J. Bult and
Olga G. Troyanskaya},
title = {A Genomewide Functional Network for the Laboratory Mouse},
journal = {PLoS Comput. Biol.},
volume = {4},
number = {9},
year = {2008},
url = {https://doi.org/10.1371/journal.pcbi.1000165},
doi = {10.1371/JOURNAL.PCBI.1000165},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/GuanMLLBT08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/AnagnostopoulosBBRRKE08,
author = {Anna V. Anagnostopoulos and
Judith A. Blake and
Carol J. Bult and
Martin Ringwald and
Joel E. Richardson and
James A. Kadin and
Janan T. Eppig},
title = {Using bio-ontologies as data annotation, integration {\&} analytical
tools at the Mouse Genome Informatics resource},
booktitle = {Proceedings of the 8th {IEEE} International Conference on Bioinformatics
and Bioengineering, {BIBE} 2008, October 8-10, 2008, Athens, Greece},
pages = {1--7},
publisher = {{IEEE}},
year = {2008},
url = {https://doi.org/10.1109/BIBE.2008.4696717},
doi = {10.1109/BIBE.2008.4696717},
timestamp = {Thu, 14 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/AnagnostopoulosBBRRKE08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/EppigBBKR07,
author = {Janan T. Eppig and
Judith A. Blake and
Carol J. Bult and
James A. Kadin and
Joel E. Richardson},
title = {The mouse genome database {(MGD):} new features facilitating a model
system},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {630--637},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl940},
doi = {10.1093/NAR/GKL940},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/EppigBBKR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BegleyKVSBE07,
author = {Dale A. Begley and
Debra M. Krupke and
Matthew J. Vincent and
John P. Sundberg and
Carol J. Bult and
Janan T. Eppig},
title = {Mouse Tumor Biology Database {(MTB):} status update and future directions},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {638--642},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl983},
doi = {10.1093/NAR/GKL983},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BegleyKVSBE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BogueGMB07,
author = {Molly A. Bogue and
Stephen C. Grubb and
Terry P. Maddatu and
Carol J. Bult},
title = {Mouse Phenome Database {(MPD)}},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {643--649},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl1049},
doi = {10.1093/NAR/GKL1049},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BogueGMB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DolanHBB06,
author = {Mary E. Dolan and
Constance C. Holden and
M. Kate Beard and
Carol J. Bult},
title = {Genomes as geography: using {GIS} technology to build interactive
genome feature maps},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {416},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-416},
doi = {10.1186/1471-2105-7-416},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DolanHBB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/BlakeB06,
author = {Judith A. Blake and
Carol J. Bult},
title = {Beyond the data deluge: Data integration and bio-ontologies},
journal = {J. Biomed. Informatics},
volume = {39},
number = {3},
pages = {314--320},
year = {2006},
url = {https://doi.org/10.1016/j.jbi.2006.01.003},
doi = {10.1016/J.JBI.2006.01.003},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/BlakeB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlakeEBKR06,
author = {Judith A. Blake and
Janan T. Eppig and
Carol J. Bult and
James A. Kadin and
Joel E. Richardson},
title = {The Mouse Genome Database {(MGD):} updates and enhancements},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Database-Issue},
pages = {562--567},
year = {2006},
url = {https://doi.org/10.1093/nar/gkj085},
doi = {10.1093/NAR/GKJ085},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlakeEBKR06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/EppigBKRB05,
author = {Janan T. Eppig and
Carol J. Bult and
James A. Kadin and
Joel E. Richardson and
Judith A. Blake},
title = {The Mouse Genome Database {(MGD):} from genes to mice - a community
resource for mouse biology},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Database-Issue},
pages = {471--475},
year = {2005},
url = {https://doi.org/10.1093/nar/gki113},
doi = {10.1093/NAR/GKI113},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/EppigBKRB05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/QiBKRREB05,
author = {Donnie Qi and
Judith A. Blake and
James A. Kadin and
Joel E. Richardson and
Martin Ringwald and
Janan T. Eppig and
Carol J. Bult},
title = {Data Integration in the Mouse Genome Informatics {(MGI)} Database},
booktitle = {Fourth International {IEEE} Computer Society Computational Systems
Bioinformatics Conference Workshops {\&} Poster Abstracts, {CSB}
2005 Workshops, Stanford, CA, USA, August 8-11, 2005},
pages = {37--38},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/CSBW.2005.48},
doi = {10.1109/CSBW.2005.48},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/QiBKRREB05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultBRKE04,
author = {Carol J. Bult and
Judith A. Blake and
Joel E. Richardson and
James A. Kadin and
Janan T. Eppig},
title = {The Mouse Genome Database {(MGD):} integrating biology with the genome},
journal = {Nucleic Acids Res.},
volume = {32},
number = {Database-Issue},
pages = {476--481},
year = {2004},
url = {https://doi.org/10.1093/nar/gkh125},
doi = {10.1093/NAR/GKH125},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultBRKE04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/RichardsonKBBER04,
author = {Joel E. Richardson and
James A. Kadin and
Judith A. Blake and
Carol J. Bult and
Janan T. Eppig and
Martin Ringwald},
editor = {Z. Meral {\"{O}}zsoyoglu and
Stanley B. Zdonik},
title = {From Sipping on a Straw to Drinking from a Fire Hose: Data Integration
in a Public Genome Database},
booktitle = {Proceedings of the 20th International Conference on Data Engineering,
{ICDE} 2004, 30 March - 2 April 2004, Boston, MA, {USA}},
pages = {795--798},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/ICDE.2004.1320050},
doi = {10.1109/ICDE.2004.1320050},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icde/RichardsonKBBER04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlakeRBKE03,
author = {Judith A. Blake and
Joel E. Richardson and
Carol J. Bult and
James A. Kadin and
Janan T. Eppig},
title = {{MGD:} the Mouse Genome Database},
journal = {Nucleic Acids Res.},
volume = {31},
number = {1},
pages = {193--195},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg047},
doi = {10.1093/NAR/GKG047},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlakeRBKE03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlakeRBKE03a,
author = {Judith A. Blake and
Joel E. Richardson and
Carol J. Bult and
James A. Kadin and
Janan T. Eppig},
title = {The Mouse Genome Database {(MGD):} the model organism database for
the laboratory mouse},
journal = {Nucleic Acids Res.},
volume = {30},
number = {1},
pages = {113--115},
year = {2002},
url = {https://doi.org/10.1093/nar/30.1.113},
doi = {10.1093/NAR/30.1.113},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlakeRBKE03a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlakeERBK01,
author = {Judith A. Blake and
Janan T. Eppig and
Joel E. Richardson and
Carol J. Bult and
James A. Kadin},
title = {The Mouse Genome Database {(MGD):} integration nexus for the laboratory
mouse},
journal = {Nucleic Acids Res.},
volume = {29},
number = {1},
pages = {91--94},
year = {2001},
url = {https://doi.org/10.1093/nar/29.1.91},
doi = {10.1093/NAR/29.1.91},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlakeERBK01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultKNSE01,
author = {Carol J. Bult and
Debra M. Krupke and
Dieter N{\"{a}}f and
John P. Sundberg and
Janan T. Eppig},
title = {Web-based access to mouse models of human cancers: the Mouse Tumor
Biology {(MTB)} Database},
journal = {Nucleic Acids Res.},
volume = {29},
number = {1},
pages = {95--97},
year = {2001},
url = {https://doi.org/10.1093/nar/29.1.95},
doi = {10.1093/NAR/29.1.95},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultKNSE01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultKSE00,
author = {Carol J. Bult and
Debra M. Krupke and
John P. Sundberg and
Janan T. Eppig},
title = {Mouse Tumor Biology Database {(MTB):} enhancements and current status},
journal = {Nucleic Acids Res.},
volume = {28},
number = {1},
pages = {112--114},
year = {2000},
url = {https://doi.org/10.1093/nar/28.1.112},
doi = {10.1093/NAR/28.1.112},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultKSE00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/BultRBKRE00,
author = {Carol J. Bult and
Joel E. Richardson and
Judith A. Blake and
James A. Kadin and
Martin Ringwald and
Janan T. Eppig},
editor = {Nikolaos G. Bourbakis},
title = {Mouse Genome Informatics in a New Age of Biological Inquiry},
booktitle = {1st {IEEE} International Symposium on Bioinformatics and Biomedical
Engineering, Arlington, Virginia, USA, November 8-10, 2000, Proceedings},
pages = {29--32},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/BIBE.2000.889586},
doi = {10.1109/BIBE.2000.889586},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/BultRBKRE00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BultKE99,
author = {Carol J. Bult and
Debra M. Krupke and
Janan T. Eppig},
title = {Electronic access to mouse tumor data: the Mouse Tumor Biology Database
{(MTB)} project},
journal = {Nucleic Acids Res.},
volume = {27},
number = {1},
pages = {99--105},
year = {1999},
url = {https://doi.org/10.1093/nar/27.1.99},
doi = {10.1093/NAR/27.1.99},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BultKE99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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