BibTeX records: Tim Clark

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@article{DBLP:journals/ni/LevinsonNMFLMC22,
  author       = {Maxwell Adam Levinson and
                  Justin Niestroy and
                  Sadnan Al Manir and
                  Karen Fairchild and
                  Douglas E. Lake and
                  J. Randall Moorman and
                  Timothy W. Clark},
  title        = {{FAIRSCAPE:} a Framework for {FAIR} and Reproducible Biomedical Analytics},
  journal      = {Neuroinformatics},
  volume       = {20},
  number       = {1},
  pages        = {187--202},
  year         = {2022},
  url          = {https://doi.org/10.1007/s12021-021-09529-4},
  doi          = {10.1007/S12021-021-09529-4},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ni/LevinsonNMFLMC22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/NiestroyMLMCFL22,
  author       = {Justin Niestroy and
                  J. Randall Moorman and
                  Maxwell Adam Levinson and
                  Sadnan Al Manir and
                  Timothy W. Clark and
                  Karen Fairchild and
                  Douglas E. Lake},
  title        = {Discovery of signatures of fatal neonatal illness in vital signs using
                  highly comparative time-series analysis},
  journal      = {npj Digit. Medicine},
  volume       = {5},
  year         = {2022},
  url          = {https://doi.org/10.1038/s41746-021-00551-z},
  doi          = {10.1038/S41746-021-00551-Z},
  timestamp    = {Mon, 01 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/npjdm/NiestroyMLMCFL22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipaw/ManirNLC21,
  author       = {Sadnan Al Manir and
                  Justin Niestroy and
                  Maxwell Adam Levinson and
                  Timothy W. Clark},
  editor       = {Boris Glavic and
                  Vanessa Braganholo and
                  David Koop},
  title        = {Evidence Graphs: Supporting Transparent and {FAIR} Computation, with
                  Defeasible Reasoning on Data, Methods, and Results},
  booktitle    = {Provenance and Annotation of Data and Processes - 8th and 9th International
                  Provenance and Annotation Workshop, {IPAW} 2020 + {IPAW} 2021, Virtual
                  Event, July 19-22, 2021, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12839},
  pages        = {39--50},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-030-80960-7\_3},
  doi          = {10.1007/978-3-030-80960-7\_3},
  timestamp    = {Thu, 29 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ipaw/ManirNLC21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jcdl/Clark21,
  author       = {Tim Clark},
  editor       = {Wolf{-}Tilo Balke and
                  Anita de Waard and
                  Yuanxi Fu and
                  Bolin Hua and
                  Jodi Schneider and
                  Ningyuan Song and
                  Xiaoguang Wang},
  title        = {The {FAIRSCAPE} digital commons framework and Evidence Graphs for
                  reproducibility (keynote)},
  booktitle    = {Proceedings of the Workshop on Digital Infrastructures for Scholarly
                  Content Objects {(DISCO} 2021) co-located with {ACM/IEEE} Joint Conference
                  on Digital Libraries 2021(JCDL 2021), Online (Due to the Global Pandemic),
                  September 30, 2021},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2976},
  pages        = {3},
  publisher    = {CEUR-WS.org},
  year         = {2021},
  url          = {https://ceur-ws.org/Vol-2976/keynote2.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:11 +0100},
  biburl       = {https://dblp.org/rec/conf/jcdl/Clark21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cse/KatzHCFM20,
  author       = {Daniel S. Katz and
                  Neil P. Chue Hong and
                  Tim Clark and
                  Martin Fenner and
                  Maryann E. Martone},
  title        = {Software and Data Citation},
  journal      = {Comput. Sci. Eng.},
  volume       = {22},
  number       = {2},
  pages        = {4--7},
  year         = {2020},
  url          = {https://doi.org/10.1109/MCSE.2020.2969730},
  doi          = {10.1109/MCSE.2020.2969730},
  timestamp    = {Tue, 16 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cse/KatzHCFM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dint/JutyWSKGC20,
  author       = {Nick S. Juty and
                  Sarala M. Wimalaratne and
                  Stian Soiland{-}Reyes and
                  John A. Kunze and
                  Carole A. Goble and
                  Tim Clark},
  title        = {Unique, Persistent, Resolvable: Identifiers as the Foundation of {FAIR}},
  journal      = {Data Intell.},
  volume       = {2},
  number       = {1-2},
  pages        = {30--39},
  year         = {2020},
  url          = {https://doi.org/10.1162/dint\_a\_00025},
  doi          = {10.1162/DINT\_A\_00025},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/dint/JutyWSKGC20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dint/GrothCCG20,
  author       = {Paul Groth and
                  Helena Cousijn and
                  Tim Clark and
                  Carole A. Goble},
  title        = {{FAIR} Data Reuse - the Path through Data Citation},
  journal      = {Data Intell.},
  volume       = {2},
  number       = {1-2},
  pages        = {78--86},
  year         = {2020},
  url          = {https://doi.org/10.1162/dint\_a\_00030},
  doi          = {10.1162/DINT\_A\_00030},
  timestamp    = {Sun, 11 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/dint/GrothCCG20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1905-08674,
  author       = {Daniel S. Katz and
                  Daina Bouquin and
                  Neil P. Chue Hong and
                  Jessica Hausman and
                  Catherine Mary Jones and
                  Daniel Chivvis and
                  Tim Clark and
                  Merc{\`{e}} Crosas and
                  Stephan Druskat and
                  Martin Fenner and
                  Tom Gillespie and
                  Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and
                  Morane Gruenpeter and
                  Ted Habermann and
                  Robert Haines and
                  Melissa Harrison and
                  Edwin A. Henneken and
                  Lorraine J. Hwang and
                  Matthew B. Jones and
                  Alastair A. Kelly and
                  David N. Kennedy and
                  Katrin Leinweber and
                  Fernando Rios and
                  Carly Robinson and
                  Ilian T. Todorov and
                  Mingfang Wu and
                  Qian Zhang},
  title        = {Software Citation Implementation Challenges},
  journal      = {CoRR},
  volume       = {abs/1905.08674},
  year         = {2019},
  url          = {http://arxiv.org/abs/1905.08674},
  eprinttype    = {arXiv},
  eprint       = {1905.08674},
  timestamp    = {Sun, 30 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1905-08674.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerj-cs/WilkinsonVSCSKG17,
  author       = {Mark D. Wilkinson and
                  Ruben Verborgh and
                  Luiz Olavo Bonino da Silva Santos and
                  Tim Clark and
                  Morris A. Swertz and
                  Fleur D. L. Kelpin and
                  Alasdair J. G. Gray and
                  Erik A. Schultes and
                  Erik M. van Mulligen and
                  Paolo Ciccarese and
                  Arnold Kuzniar and
                  Anand Gavai and
                  Mark Thompson and
                  Rajaram Kaliyaperumal and
                  Jerven T. Bolleman and
                  Michel Dumontier},
  title        = {Interoperability and FAIRness through a novel combination of Web technologies},
  journal      = {PeerJ Comput. Sci.},
  volume       = {3},
  pages        = {e110},
  year         = {2017},
  url          = {https://doi.org/10.7717/peerj-cs.110},
  doi          = {10.7717/PEERJ-CS.110},
  timestamp    = {Mon, 18 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/peerj-cs/WilkinsonVSCSKG17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerjpre/WilkinsonVSCSKG17,
  author       = {Mark D. Wilkinson and
                  Ruben Verborgh and
                  Luiz Olavo Bonino da Silva Santos and
                  Tim Clark and
                  Morris A. Swertz and
                  Fleur D. L. Kelpin and
                  Alasdair J. G. Gray and
                  Erik A. Schultes and
                  Erik M. van Mulligen and
                  Paolo Ciccarese and
                  Arnold Kuzniar and
                  Anand Gavai and
                  Mark Thompson and
                  Rajaram Kaliyaperumal and
                  Jerven T. Bolleman and
                  Michel Dumontier},
  title        = {Interoperability and FAIRness through a novel combination of Web technologies},
  journal      = {PeerJ Prepr.},
  volume       = {5},
  pages        = {e2522},
  year         = {2017},
  url          = {https://doi.org/10.7287/peerj.preprints.2522v2},
  doi          = {10.7287/PEERJ.PREPRINTS.2522V2},
  timestamp    = {Thu, 09 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/peerjpre/WilkinsonVSCSKG17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerjpre/WilkinsonVSCSKG16,
  author       = {Mark D. Wilkinson and
                  Ruben Verborgh and
                  Luiz Olavo Bonino da Silva Santos and
                  Tim Clark and
                  Morris A. Swertz and
                  Fleur D. L. Kelpin and
                  Alasdair J. G. Gray and
                  Erik A. Schultes and
                  Erik M. van Mulligen and
                  Paolo Ciccarese and
                  Mark Thompson and
                  Rajaram Kaliyaperumal and
                  Jerven T. Bolleman and
                  Michel Dumontier},
  title        = {Interoperability and FAIRness through a novel combination of Web technologies},
  journal      = {PeerJ Prepr.},
  volume       = {4},
  pages        = {e2522},
  year         = {2016},
  url          = {https://doi.org/10.7287/peerj.preprints.2522v1},
  doi          = {10.7287/PEERJ.PREPRINTS.2522V1},
  timestamp    = {Thu, 09 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/peerjpre/WilkinsonVSCSKG16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerj-cs/StarrCCDDDHHHHH15,
  author       = {Joan Starr and
                  Eleni Castro and
                  Merc{\`{e}} Crosas and
                  Michel Dumontier and
                  Robert R. Downs and
                  Ruth E. Duerr and
                  Laurel L. Haak and
                  Melissa A. Haendel and
                  Iv{\'{a}}n Herman and
                  Simon Hodson and
                  Joe Hourcl{\'{e}} and
                  John Ernest Kratz and
                  Jennifer Lin and
                  Lars Holm Nielsen and
                  Amy Nurnberger and
                  Stefan Pr{\"{o}}ll and
                  Andreas Rauber and
                  Simone Sacchi and
                  Arthur P. Smith and
                  Michael Taylor and
                  Tim Clark},
  title        = {Achieving human and machine accessibility of cited data in scholarly
                  publications},
  journal      = {PeerJ Comput. Sci.},
  volume       = {1},
  pages        = {e1},
  year         = {2015},
  url          = {https://doi.org/10.7717/peerj-cs.1},
  doi          = {10.7717/PEERJ-CS.1},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/peerj-cs/StarrCCDDDHHHHH15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaaiss/ClarkKP15,
  author       = {Tim Clark and
                  Carsten Ke{\ss}ler and
                  Hemant Purohit},
  title        = {Feasibility of Information Interoperability in the Humanitarian Domain},
  booktitle    = {2015 {AAAI} Spring Symposia, Stanford University, Palo Alto, California,
                  USA, March 22-25, 2015},
  publisher    = {{AAAI} Press},
  year         = {2015},
  url          = {http://www.aaai.org/ocs/index.php/SSS/SSS15/paper/view/10297},
  timestamp    = {Wed, 14 Nov 2018 14:01:49 +0100},
  biburl       = {https://dblp.org/rec/conf/aaaiss/ClarkKP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/SchneiderBRCHMN15,
  author       = {Jodi Schneider and
                  Mathias Brochhausen and
                  Samuel Rosko and
                  Paolo Ciccarese and
                  William R. Hogan and
                  Daniel C. Malone and
                  Yifan Ning and
                  Tim Clark and
                  Richard D. Boyce},
  editor       = {Dezhao Song and
                  Adam Fermier and
                  Cui Tao and
                  Frank Schilder},
  title        = {Formalizing Knowledge and Evidence about Potential Drug-drug Interactions},
  booktitle    = {Proceedings of International Workshop on Biomedical Data Mining, Modeling,
                  and Semantic Integration: {A} Promising Approach to Solving Unmet
                  Medical Needs {(BDM2I2015)} co-located with The 14th International
                  Semantic Web Conference {(ISWC} 2015), Bethlehem, United States, October
                  11th, 2015},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1428},
  publisher    = {CEUR-WS.org},
  year         = {2015},
  url          = {https://ceur-ws.org/Vol-1428/BDM2I\_2015\_paper\_10.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:07 +0100},
  biburl       = {https://dblp.org/rec/conf/semweb/SchneiderBRCHMN15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerjpre/StarrCCDDDHHHHH15,
  author       = {Joan Starr and
                  Eleni Castro and
                  Merc{\`{e}} Crosas and
                  Michel Dumontier and
                  Robert R. Downs and
                  Ruth E. Duerr and
                  Laurel L. Haak and
                  Melissa A. Haendel and
                  Iv{\'{a}}n Herman and
                  Simon Hodson and
                  Joe Hourcl{\'{e}} and
                  John Ernest Kratz and
                  Jennifer Lin and
                  Lars Holm Nielsen and
                  Amy Nurnberger and
                  Stefan Pr{\"{o}}ll and
                  Andreas Rauber and
                  Simone Sacchi and
                  Arthur P. Smith and
                  Michael Taylor and
                  Tim Clark},
  title        = {Achieving human and machine accessibility of cited data in scholarly
                  publications},
  journal      = {PeerJ Prepr.},
  volume       = {3},
  pages        = {e697},
  year         = {2015},
  url          = {https://doi.org/10.7287/peerj.preprints.697v4},
  doi          = {10.7287/PEERJ.PREPRINTS.697V4},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/peerjpre/StarrCCDDDHHHHH15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/ClarkCG14,
  author       = {Tim Clark and
                  Paolo Ciccarese and
                  Carole A. Goble},
  title        = {Micropublications: a semantic model for claims, evidence, arguments
                  and annotations in biomedical communications},
  journal      = {J. Biomed. Semant.},
  volume       = {5},
  pages        = {28},
  year         = {2014},
  url          = {https://doi.org/10.1186/2041-1480-5-28},
  doi          = {10.1186/2041-1480-5-28},
  timestamp    = {Mon, 26 Sep 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/ClarkCG14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/MerrillCCCD14,
  author       = {Emily Merrill and
                  Stephane Corlosquet and
                  Paolo Ciccarese and
                  Tim Clark and
                  Sudeshna Das},
  title        = {Semantic Web repositories for genomics data using the eXframe platform},
  journal      = {J. Biomed. Semant.},
  volume       = {5},
  number       = {{S-1}},
  pages        = {S3},
  year         = {2014},
  url          = {https://doi.org/10.1186/2041-1480-5-S1-S3},
  doi          = {10.1186/2041-1480-5-S1-S3},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/MerrillCCCD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/DasMTACIC14,
  author       = {Sudeshna Das and
                  Patricia G. Mccaffrey and
                  Megan Talkington and
                  Neil Andrews and
                  Stephane Corlosquet and
                  Adrian Ivinson and
                  Tim Clark},
  title        = {Pain Research Forum: application of scientific social media frameworks
                  in neuroscience},
  journal      = {Frontiers Neuroinformatics},
  volume       = {8},
  pages        = {21},
  year         = {2014},
  url          = {https://doi.org/10.3389/fninf.2014.00021},
  doi          = {10.3389/FNINF.2014.00021},
  timestamp    = {Thu, 28 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/fini/DasMTACIC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcheminf/Clark14a,
  author       = {Tim Clark},
  title        = {Simulating "soft" electronics},
  journal      = {J. Cheminformatics},
  volume       = {6},
  number       = {{S-1}},
  pages        = {19},
  year         = {2014},
  url          = {https://doi.org/10.1186/1758-2946-6-S1-O19},
  doi          = {10.1186/1758-2946-6-S1-O19},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcheminf/Clark14a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/semweb/Clark14,
  author       = {Tim Clark},
  title        = {Next Generation Scientific Publishing and the Web of Data},
  journal      = {Semantic Web},
  volume       = {5},
  number       = {4},
  pages        = {257--259},
  year         = {2014},
  url          = {https://doi.org/10.3233/SW-140139},
  doi          = {10.3233/SW-140139},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/semweb/Clark14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/semweb/CiccareseSPC14,
  author       = {Paolo Ciccarese and
                  David M. Shotton and
                  Silvio Peroni and
                  Tim Clark},
  title        = {CiTO + {SWAN:} The web semantics of bibliographic records, citations,
                  evidence and discourse relationships},
  journal      = {Semantic Web},
  volume       = {5},
  number       = {4},
  pages        = {295--311},
  year         = {2014},
  url          = {https://doi.org/10.3233/SW-130098},
  doi          = {10.3233/SW-130098},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/semweb/CiccareseSPC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ws/ClarkR14,
  author       = {Tim Clark and
                  Marco Roos},
  title        = {Recent applications of web semantics in eLifeScience},
  journal      = {J. Web Semant.},
  volume       = {29},
  pages        = {1--2},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.websem.2014.11.005},
  doi          = {10.1016/J.WEBSEM.2014.11.005},
  timestamp    = {Wed, 25 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ws/ClarkR14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/SchneiderCCB14,
  author       = {Jodi Schneider and
                  Paolo Ciccarese and
                  Tim Clark and
                  Richard D. Boyce},
  editor       = {Jun Zhao and
                  Marieke van Erp and
                  Carsten Ke{\ss}ler and
                  Tomi Kauppinen and
                  Jacco van Ossenbruggen and
                  Willem Robert van Hage},
  title        = {Using the Micropublications Ontology and the Open Annotation Data
                  Model to Represent Evidence within a Drug-Drug Interaction Knowledge
                  Base},
  booktitle    = {Proceedings of the 4th Workshop on Linked Science 2014 - Making Sense
                  Out of Data {(LISC2014)} co-located with the 13th International Semantic
                  Web Conference {(ISWC} 2014), Riva del Garda, Italy, October 19, 2014},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1282},
  pages        = {60--70},
  publisher    = {CEUR-WS.org},
  year         = {2014},
  url          = {https://ceur-ws.org/Vol-1282/lisc2014\_submission\_8.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:09 +0100},
  biburl       = {https://dblp.org/rec/conf/semweb/SchneiderCCB14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/CiccareseC14,
  author       = {Paolo Ciccarese and
                  Tim Clark},
  editor       = {Adrian Paschke and
                  Albert Burger and
                  Paolo Romano and
                  M. Scott Marshall and
                  Andrea Splendiani},
  title        = {Annotopia: An Open Source Universal Annotation Server for Biomedical
                  Research},
  booktitle    = {Proceedings of the 7th International Workshop on Semantic Web Applications
                  and Tools for Life Sciences, Berlin, Germany, December 9-11, 2014},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1320},
  publisher    = {CEUR-WS.org},
  year         = {2014},
  url          = {https://ceur-ws.org/Vol-1320/paper\_35.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:02 +0100},
  biburl       = {https://dblp.org/rec/conf/swat4ls/CiccareseC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/MerrillSCCD14,
  author       = {Emily Merrill and
                  Shannan J. Ho Sui and
                  Stephane Corlosquet and
                  Tim Clark and
                  Sudeshna Das},
  editor       = {Adrian Paschke and
                  Albert Burger and
                  Paolo Romano and
                  M. Scott Marshall and
                  Andrea Splendiani},
  title        = {Using eXframe to Build Semantic Web Genomics Repositories},
  booktitle    = {Proceedings of the 7th International Workshop on Semantic Web Applications
                  and Tools for Life Sciences, Berlin, Germany, December 9-11, 2014},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1320},
  publisher    = {CEUR-WS.org},
  year         = {2014},
  url          = {https://ceur-ws.org/Vol-1320/paper\_28.pdf},
  timestamp    = {Thu, 25 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/swat4ls/MerrillSCCD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/CiccareseSBGGC13,
  author       = {Paolo Ciccarese and
                  Stian Soiland{-}Reyes and
                  Khalid Belhajjame and
                  Alasdair J. G. Gray and
                  Carole A. Goble and
                  Tim Clark},
  title        = {{PAV} ontology: provenance, authoring and versioning},
  journal      = {J. Biomed. Semant.},
  volume       = {4},
  pages        = {37},
  year         = {2013},
  url          = {https://doi.org/10.1186/2041-1480-4-37},
  doi          = {10.1186/2041-1480-4-37},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/CiccareseSBGGC13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/internet/CiccareseSC13,
  author       = {Paolo Ciccarese and
                  Stian Soiland{-}Reyes and
                  Tim Clark},
  title        = {Web Annotation as a First-Class Object},
  journal      = {{IEEE} Internet Comput.},
  volume       = {17},
  number       = {6},
  pages        = {71--75},
  year         = {2013},
  url          = {https://doi.org/10.1109/MIC.2013.123},
  doi          = {10.1109/MIC.2013.123},
  timestamp    = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/internet/CiccareseSC13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1304-7224,
  author       = {Paolo Ciccarese and
                  Stian Soiland{-}Reyes and
                  Khalid Belhajjame and
                  Alasdair J. G. Gray and
                  Carole A. Goble and
                  Tim Clark},
  title        = {{PAV} ontology: Provenance, Authoring and Versioning},
  journal      = {CoRR},
  volume       = {abs/1304.7224},
  year         = {2013},
  url          = {http://arxiv.org/abs/1304.7224},
  eprinttype    = {arXiv},
  eprint       = {1304.7224},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1304-7224.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1305-3506,
  author       = {Tim Clark and
                  Paolo Ciccarese and
                  Carole A. Goble},
  title        = {Micropublications: a Semantic Model for Claims, Evidence, Arguments
                  and Annotations in Biomedical Communications},
  journal      = {CoRR},
  volume       = {abs/1305.3506},
  year         = {2013},
  url          = {http://arxiv.org/abs/1305.3506},
  eprinttype    = {arXiv},
  eprint       = {1305.3506},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1305-3506.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/CiccareseSC13,
  author       = {Paolo Ciccarese and
                  Stian Soiland{-}Reyes and
                  Tim Clark},
  title        = {Web Annotation as a First Class Object},
  journal      = {CoRR},
  volume       = {abs/1310.6555},
  year         = {2013},
  url          = {http://arxiv.org/abs/1310.6555},
  eprinttype    = {arXiv},
  eprint       = {1310.6555},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/CiccareseSC13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BandrowskiCLMSCCMWAGM12,
  author       = {Anita E. Bandrowski and
                  Jonathan Cachat and
                  Yuling Li and
                  Hans{-}Michael M{\"{u}}ller and
                  Paul W. Sternberg and
                  Paolo Ciccarese and
                  Tim Clark and
                  Luis N. Marenco and
                  Rixin Wang and
                  Vadim Astakhov and
                  Jeffrey S. Grethe and
                  Maryann E. Martone},
  title        = {A hybrid human and machine resource curation pipeline for the Neuroscience
                  Information Framework},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2012},
  year         = {2012},
  url          = {https://doi.org/10.1093/database/bas005},
  doi          = {10.1093/DATABASE/BAS005},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biodb/BandrowskiCLMSCCMWAGM12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/CiccareseOC12,
  author       = {Paolo Ciccarese and
                  Marco Ocana and
                  Tim Clark},
  title        = {Open semantic annotation of scientific publications using {DOMEO}},
  journal      = {J. Biomed. Semant.},
  volume       = {3},
  number       = {{S-1}},
  pages        = {S1},
  year         = {2012},
  url          = {http://www.jbiomedsem.com/content/3/S1/S1},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/CiccareseOC12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaaifs/ClarkCHLS12,
  author       = {Timothy W. Clark and
                  William W. Cohen and
                  Lawrence Hunter and
                  Chris J. Lintott and
                  Jude W. Shavlik},
  title        = {Invited Talks},
  booktitle    = {Discovery Informatics: The Role of {AI} Research in Innovating Scientific
                  Processes, Papers from the 2012 {AAAI} Fall Symposium, Arlington,
                  Virginia, USA, November 2-4, 2012},
  series       = {{AAAI} Technical Report},
  volume       = {{FS-12-03}},
  publisher    = {{AAAI}},
  year         = {2012},
  url          = {http://www.aaai.org/ocs/index.php/FSS/FSS12/paper/view/5686},
  timestamp    = {Tue, 08 Mar 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aaaifs/ClarkCHLS12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/LucianoABBCDDGHJKKKLMMMOPPPSSTWZSD11,
  author       = {Joanne S. Luciano and
                  Bosse Andersson and
                  Colin R. Batchelor and
                  Olivier Bodenreider and
                  Tim Clark and
                  Christine K. Denney and
                  Christopher Domarew and
                  Thomas Gambet and
                  Lee Harland and
                  Anja Jentzsch and
                  Vipul Kashyap and
                  Peter J. Kos and
                  Julia Kozlovsky and
                  Timothy Lebo and
                  M. Scott Marshall and
                  Jamie P. McCusker and
                  Deborah L. McGuinness and
                  Chimezie Ogbuji and
                  Elgar Pichler and
                  Robert L. Powers and
                  Eric Prud'hommeaux and
                  Matthias Samwald and
                  Lynn M. Schriml and
                  Peter J. Tonellato and
                  Patricia L. Whetzel and
                  Jun Zhao and
                  Susie Stephens and
                  Michel Dumontier},
  title        = {The Translational Medicine Ontology and Knowledge Base: driving personalized
                  medicine by bridging the gap between bench and bedside},
  journal      = {J. Biomed. Semant.},
  volume       = {2},
  number       = {{S-2}},
  pages        = {S1},
  year         = {2011},
  url          = {http://www.jbiomedsem.com/content/2/S2/S1},
  timestamp    = {Thu, 16 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/LucianoABBCDDGHJKKKLMMMOPPPSSTWZSD11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/CiccareseOGDC11,
  author       = {Paolo Ciccarese and
                  Marco Ocana and
                  Leyla Jael Garc{\'{\i}}a Castro and
                  Sudeshna Das and
                  Tim Clark},
  title        = {An open annotation ontology for science on web 3.0},
  journal      = {J. Biomed. Semant.},
  volume       = {2},
  number       = {{S-2}},
  pages        = {S4},
  year         = {2011},
  url          = {http://www.jbiomedsem.com/content/2/S2/S4},
  timestamp    = {Mon, 04 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/CiccareseOGDC11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SinhaMACD11,
  author       = {Amit U. Sinha and
                  Emily Merrill and
                  Scott A. Armstrong and
                  Timothy W. Clark and
                  Sudeshna Das},
  title        = {eXframe: reusable framework for storage, analysis and visualization
                  of genomics experiments},
  journal      = {{BMC} Bioinform.},
  volume       = {12},
  pages        = {452},
  year         = {2011},
  url          = {https://doi.org/10.1186/1471-2105-12-452},
  doi          = {10.1186/1471-2105-12-452},
  timestamp    = {Tue, 04 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/SinhaMACD11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dagstuhl-manifestos/BourneCDWHHS11,
  author       = {Philip E. Bourne and
                  Timothy W. Clark and
                  Robert Dale and
                  Anita de Waard and
                  Ivan Herman and
                  Eduard H. Hovy and
                  David M. Shotton},
  title        = {Improving The Future of Research Communications and e-Scholarship
                  (Dagstuhl Perspectives Workshop 11331)},
  journal      = {Dagstuhl Manifestos},
  volume       = {1},
  number       = {1},
  pages        = {41--60},
  year         = {2011},
  url          = {https://doi.org/10.4230/DagMan.1.1.41},
  doi          = {10.4230/DAGMAN.1.1.41},
  timestamp    = {Wed, 14 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/dagstuhl-manifestos/BourneCDWHHS11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dagstuhl-reports/ClarkWHH11,
  author       = {Tim Clark and
                  Anita de Waard and
                  Ivan Herman and
                  Eduard H. Hovy},
  title        = {The Future of Research Communication (Dagstuhl Perspectives Workshop
                  11331)},
  journal      = {Dagstuhl Reports},
  volume       = {1},
  number       = {8},
  pages        = {29--52},
  year         = {2011},
  url          = {https://doi.org/10.4230/DagRep.1.8.29},
  doi          = {10.4230/DAGREP.1.8.29},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/dagstuhl-reports/ClarkWHH11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/DasGGWLC09,
  author       = {Sudeshna Das and
                  Lisa Girard and
                  Tom Green and
                  Louis Weitzman and
                  Alister Lewis{-}Bowen and
                  Tim Clark},
  title        = {Building biomedical web communities using a semantically aware content
                  management system},
  journal      = {Briefings Bioinform.},
  volume       = {10},
  number       = {2},
  pages        = {129--138},
  year         = {2009},
  url          = {https://doi.org/10.1093/bib/bbn052},
  doi          = {10.1093/BIB/BBN052},
  timestamp    = {Tue, 04 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/DasGGWLC09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/elpub/GoetzCDG09,
  author       = {Mark Goetz and
                  Tim Clark and
                  Sudeshna Das and
                  Lisa Girard},
  title        = {Scientific publications on Web 3.0},
  booktitle    = {Rethinking Electronic Publishing: Innovation in Communication Paradigms
                  and Technologies - Proceedings of the 13th International Conference
                  on Electronic Publishing, Milano, Italy, June 10-12, 2009},
  pages        = {107--129},
  year         = {2009},
  url          = {http://elpub.architexturez.net/doc/oai-elpub-id-149-elpub2009},
  timestamp    = {Wed, 10 Feb 2021 22:02:09 +0100},
  biburl       = {https://dblp.org/rec/conf/elpub/GoetzCDG09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/CorlosquetDCPD09,
  author       = {Stephane Corlosquet and
                  Renaud Delbru and
                  Tim Clark and
                  Axel Polleres and
                  Stefan Decker},
  editor       = {Abraham Bernstein and
                  David R. Karger and
                  Tom Heath and
                  Lee Feigenbaum and
                  Diana Maynard and
                  Enrico Motta and
                  Krishnaprasad Thirunarayan},
  title        = {Produce and Consume Linked Data with Drupal!},
  booktitle    = {The Semantic Web - {ISWC} 2009, 8th International Semantic Web Conference,
                  {ISWC} 2009, Chantilly, VA, USA, October 25-29, 2009. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5823},
  pages        = {763--778},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-04930-9\_48},
  doi          = {10.1007/978-3-642-04930-9\_48},
  timestamp    = {Tue, 07 Sep 2021 13:47:49 +0200},
  biburl       = {https://dblp.org/rec/conf/semweb/CorlosquetDCPD09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/CiccareseWWOKRC08,
  author       = {Paolo Ciccarese and
                  Elizabeth Wu and
                  Gwendolyn T. Wong and
                  Marco Ocana and
                  June Kinoshita and
                  Alan Ruttenberg and
                  Tim Clark},
  title        = {The {SWAN} biomedical discourse ontology},
  journal      = {J. Biomed. Informatics},
  volume       = {41},
  number       = {5},
  pages        = {739--751},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.jbi.2008.04.010},
  doi          = {10.1016/J.JBI.2008.04.010},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jbi/CiccareseWWOKRC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Clark07,
  author       = {Tim Clark},
  title        = {Knowledge Integration in Biomedicine: Technology and Community},
  journal      = {Briefings Bioinform.},
  volume       = {8},
  number       = {3},
  year         = {2007},
  url          = {https://doi.org/10.1093/bib/bbm019},
  doi          = {10.1093/BIB/BBM019},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/Clark07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ClarkK07,
  author       = {Tim Clark and
                  June Kinoshita},
  title        = {Alzforum and {SWAN:} the present and future of scientific web communities},
  journal      = {Briefings Bioinform.},
  volume       = {8},
  number       = {3},
  pages        = {163--171},
  year         = {2007},
  url          = {https://doi.org/10.1093/bib/bbm012},
  doi          = {10.1093/BIB/BBM012},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/ClarkK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Clark07a,
  author       = {Tim Clark},
  title        = {Knowledge Integration in Biomedicine: Technology and Community},
  journal      = {Briefings Bioinform.},
  volume       = {8},
  number       = {5},
  pages        = {380},
  year         = {2007},
  url          = {https://doi.org/10.1093/bib/bbm042},
  doi          = {10.1093/BIB/BBM042},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/Clark07a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LamMCGKSMWWLCMSC07,
  author       = {Hugo Y. K. Lam and
                  Luis N. Marenco and
                  Tim Clark and
                  Yong Gao and
                  June Kinoshita and
                  Gordon M. Shepherd and
                  Perry L. Miller and
                  Elizabeth Wu and
                  Gwendolyn T. Wong and
                  Nian Liu and
                  Chiquito J. Crasto and
                  Thomas M. Morse and
                  Susie Stephens and
                  Kei{-}Hoi Cheung},
  title        = {AlzPharm: integration of neurodegeneration data using {RDF}},
  journal      = {{BMC} Bioinform.},
  volume       = {8},
  number       = {{S-3}},
  year         = {2007},
  url          = {https://doi.org/10.1186/1471-2105-8-S3-S4},
  doi          = {10.1186/1471-2105-8-S3-S4},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/LamMCGKSMWWLCMSC07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RuttenbergCBSBCDFGKKLMORSWWZHNHC07,
  author       = {Alan Ruttenberg and
                  Tim Clark and
                  William J. Bug and
                  Matthias Samwald and
                  Olivier Bodenreider and
                  Helen Chen and
                  Donald Doherty and
                  Kerstin Forsberg and
                  Yong Gao and
                  Vipul Kashyap and
                  June Kinoshita and
                  Joanne Luciano and
                  M. Scott Marshall and
                  Chimezie Ogbuji and
                  Jonathan Rees and
                  Susie Stephens and
                  Gwendolyn T. Wong and
                  Elizabeth Wu and
                  Davide Zaccagnini and
                  Tonya Hongsermeier and
                  Eric Neumann and
                  Ivan Herman and
                  Kei{-}Hoi Cheung},
  title        = {Advancing translational research with the Semantic Web},
  journal      = {{BMC} Bioinform.},
  volume       = {8},
  number       = {{S-3}},
  year         = {2007},
  url          = {https://doi.org/10.1186/1471-2105-8-S3-S2},
  doi          = {10.1186/1471-2105-8-S3-S2},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/RuttenbergCBSBCDFGKKLMORSWWZHNHC07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ws/GaoKWMLSCC06,
  author       = {Yong Gao and
                  June Kinoshita and
                  Elizabeth Wu and
                  Eric L. Miller and
                  Ryan Lee and
                  Andy Seaborne and
                  Steve Cayzer and
                  Tim Clark},
  title        = {{SWAN:} {A} distributed knowledge infrastructure for Alzheimer disease
                  research},
  journal      = {J. Web Semant.},
  volume       = {4},
  number       = {3},
  pages        = {222--228},
  year         = {2006},
  url          = {https://doi.org/10.1016/j.websem.2006.05.006},
  doi          = {10.1016/J.WEBSEM.2006.05.006},
  timestamp    = {Tue, 07 Jan 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ws/GaoKWMLSCC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ClarkML04,
  author       = {Tim Clark and
                  Sean Martin and
                  Ted Liefeld},
  title        = {Globally distributed object identification for biological knowledgebases},
  journal      = {Briefings Bioinform.},
  volume       = {5},
  number       = {1},
  pages        = {59--70},
  year         = {2004},
  url          = {https://doi.org/10.1093/bib/5.1.59},
  doi          = {10.1093/BIB/5.1.59},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/ClarkML04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Clark03,
  author       = {Tim Clark},
  title        = {Editorial: Identity and Interoperability in Bioinformatics},
  journal      = {Briefings Bioinform.},
  volume       = {4},
  number       = {1},
  pages        = {4--6},
  year         = {2003},
  url          = {https://doi.org/10.1093/bib/4.1.4},
  doi          = {10.1093/BIB/4.1.4},
  timestamp    = {Tue, 04 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/Clark03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/FicenecOPRFCCLORRHC03,
  author       = {David Ficenec and
                  Mark Osborne and
                  Jo{\"{e}}l R. Pradines and
                  Daniel R. Richards and
                  Ramon M. Felciano and
                  Raymond J. Cho and
                  Richard O. Chen and
                  Ted Liefeld and
                  James Owen and
                  Alan Ruttenberg and
                  Christian G. Reich and
                  Joseph Horvath and
                  Tim Clark},
  title        = {Computational knowledge integration in biopharmaceutical research},
  journal      = {Briefings Bioinform.},
  volume       = {4},
  number       = {3},
  pages        = {260--278},
  year         = {2003},
  url          = {https://doi.org/10.1093/bib/4.3.260},
  doi          = {10.1093/BIB/4.3.260},
  timestamp    = {Sun, 12 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bib/FicenecOPRFCCLORRHC03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isjgp/Clark00,
  author       = {Tim Clark},
  title        = {Virtual Private Networks with QoS},
  journal      = {Inf. Secur. J. {A} Glob. Perspect.},
  volume       = {9},
  number       = {2},
  pages        = {1--8},
  year         = {2000},
  url          = {https://doi.org/10.1201/1086/43309.9.2.20000506/31353.6},
  doi          = {10.1201/1086/43309.9.2.20000506/31353.6},
  timestamp    = {Wed, 13 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/isjgp/Clark00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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