BibTeX records: Darren R. Flower

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@article{DBLP:journals/mbec/ChattopadhyayDFC23,
  author       = {Subhagata Chattopadhyay and
                  Nhat Phuong Do and
                  Darren R. Flower and
                  Amit K. Chattopadhyay},
  title        = {Extracting prime protein targets as possible drug candidates: machine
                  learning evaluation},
  journal      = {Medical Biol. Eng. Comput.},
  volume       = {61},
  number       = {11},
  pages        = {3035--3048},
  year         = {2023},
  url          = {https://doi.org/10.1007/s11517-023-02893-0},
  doi          = {10.1007/S11517-023-02893-0},
  timestamp    = {Wed, 01 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mbec/ChattopadhyayDFC23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QuinzoLZFR20,
  author       = {Monica J. Quinzo and
                  Esther M. Lafuente and
                  Pilar Zuluaga and
                  Darren R. Flower and
                  Pedro A. Reche},
  title        = {Correction to: Computational assembly of a human Cytomegalovirus vaccine
                  upon experimental epitope legacy},
  journal      = {{BMC} Bioinform.},
  volume       = {21},
  number       = {1},
  pages        = {116},
  year         = {2020},
  url          = {https://doi.org/10.1186/s12859-020-3452-7},
  doi          = {10.1186/S12859-020-3452-7},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/QuinzoLZFR20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QuinzoLZFR19,
  author       = {Monica J. Quinzo and
                  Esther M. Lafuente and
                  Pilar Zuluaga and
                  Darren R. Flower and
                  Pedro A. Reche},
  title        = {Computational assembly of a human Cytomegalovirus vaccine upon experimental
                  epitope legacy},
  journal      = {{BMC} Bioinform.},
  volume       = {20-S},
  number       = {6},
  pages        = {476},
  year         = {2019},
  url          = {https://doi.org/10.1186/s12859-019-3052-6},
  doi          = {10.1186/S12859-019-3052-6},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/QuinzoLZFR19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/QuinzoLRF18,
  author       = {Monica J. Quinzo and
                  Esther M. Lafuente and
                  Pedro A. Reche and
                  Darren R. Flower},
  editor       = {Huiru Jane Zheng and
                  Zoraida Callejas and
                  David Griol and
                  Haiying Wang and
                  Xiaohua Hu and
                  Harald H. H. W. Schmidt and
                  Jan Baumbach and
                  Julie Dickerson and
                  Le Zhang},
  title        = {Computational design of a legacy-based epitope vaccine against Human
                  Cytomegalovirus},
  booktitle    = {{IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2018, Madrid, Spain, December 3-6, 2018},
  pages        = {1411--1417},
  publisher    = {{IEEE} Computer Society},
  year         = {2018},
  url          = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621537},
  doi          = {10.1109/BIBM.2018.8621537},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/QuinzoLRF18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AudainRHFP16,
  author       = {Enrique Audain and
                  Yassel Ramos and
                  Henning Hermjakob and
                  Darren R. Flower and
                  Yasset P{\'{e}}rez{-}Riverol},
  title        = {Accurate estimation of isoelectric point of protein and peptide based
                  on amino acid sequences},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {6},
  pages        = {821--827},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btv674},
  doi          = {10.1093/BIOINFORMATICS/BTV674},
  timestamp    = {Mon, 03 Jan 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/AudainRHFP16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SheikhGRF16,
  author       = {Qamar M. Sheikh and
                  Derek Gatherer and
                  Pedro A. Reche and
                  Darren R. Flower},
  title        = {Towards the knowledge-based design of universal influenza epitope
                  ensemble vaccines},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {21},
  pages        = {3233--3239},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btw399},
  doi          = {10.1093/BIOINFORMATICS/BTW399},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/SheikhGRF16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BunkuteCCBNF15,
  author       = {Egle Bunkute and
                  Christopher Cummins and
                  Fraser J. Crofts and
                  Gareth Bunce and
                  Ian T. Nabney and
                  Darren R. Flower},
  title        = {{PIP-DB:} the Protein Isoelectric Point database},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {2},
  pages        = {295--296},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btu637},
  doi          = {10.1093/BIOINFORMATICS/BTU637},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BunkuteCCBNF15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChattopadhyayNF15,
  author       = {Amit K. Chattopadhyay and
                  Diar Nasiev and
                  Darren R. Flower},
  title        = {A statistical physics perspective on alignment-independent protein
                  sequence comparison},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {15},
  pages        = {2469--2474},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btv167},
  doi          = {10.1093/BIOINFORMATICS/BTV167},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ChattopadhyayNF15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/grapp/MumtazFN14,
  author       = {Shahzad Mumtaz and
                  Darren R. Flower and
                  Ian T. Nabney},
  editor       = {Robert S. Laramee and
                  Andreas Kerren and
                  Jos{\'{e}} Braz},
  title        = {Multi-level Visualisation using Gaussian Process Latent Variable Models},
  booktitle    = {Proceedings of the 5th International Conference on Information Visualization
                  Theory and Applications, {IVAPP} 2014, Lisbon, Portugal, 5-8 January,
                  2014},
  pages        = {122--129},
  publisher    = {SciTePress},
  year         = {2014},
  url          = {https://doi.org/10.5220/0004686801220129},
  doi          = {10.5220/0004686801220129},
  timestamp    = {Sun, 21 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/grapp/MumtazFN14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DimitrovFD13,
  author       = {Ivan Dimitrov and
                  Darren R. Flower and
                  Irini A. Doytchinova},
  title        = {AllerTOP - a server for in silico prediction of allergens},
  journal      = {{BMC} Bioinform.},
  volume       = {14},
  number       = {{S-6}},
  pages        = {S4},
  year         = {2013},
  url          = {https://doi.org/10.1186/1471-2105-14-S6-S4},
  doi          = {10.1186/1471-2105-14-S6-S4},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/DimitrovFD13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibcb/MumtazNF12,
  author       = {Shahzad Mumtaz and
                  Ian T. Nabney and
                  Darren R. Flower},
  title        = {Novel visualization methods for protein data},
  booktitle    = {2012 {IEEE} Symposium on Computational Intelligence in Bioinformatics
                  and Computational Biology, {CIBCB} 2012, San Diego, CA, USA, May 9-12,
                  2012},
  pages        = {198--205},
  publisher    = {{IEEE}},
  year         = {2012},
  url          = {https://doi.org/10.1109/CIBCB.2012.6217231},
  doi          = {10.1109/CIBCB.2012.6217231},
  timestamp    = {Wed, 16 Oct 2019 14:14:48 +0200},
  biburl       = {https://dblp.org/rec/conf/cibcb/MumtazNF12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DimitrovGFD10,
  author       = {Ivan Dimitrov and
                  Panayot Garnev and
                  Darren R. Flower and
                  Irini A. Doytchinova},
  title        = {EpiTOP - a proteochemometric tool for {MHC} class {II} binding prediction},
  journal      = {Bioinform.},
  volume       = {26},
  number       = {16},
  pages        = {2066--2068},
  year         = {2010},
  url          = {https://doi.org/10.1093/bioinformatics/btq324},
  doi          = {10.1093/BIOINFORMATICS/BTQ324},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/DimitrovGFD10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijdmb/SeckerDFCTF10,
  author       = {Andrew Secker and
                  Matthew N. Davies and
                  Alex Alves Freitas and
                  Edward Clark and
                  Jonathan Timmis and
                  Darren R. Flower},
  title        = {Hierarchical classification of G-Protein-Coupled Receptors with data-driven
                  selection of attributes and classifiers},
  journal      = {Int. J. Data Min. Bioinform.},
  volume       = {4},
  number       = {2},
  pages        = {191--210},
  year         = {2010},
  url          = {https://doi.org/10.1504/IJDMB.2010.032150},
  doi          = {10.1504/IJDMB.2010.032150},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijdmb/SeckerDFCTF10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AnsariFR10,
  author       = {Hifzur Rahman Ansari and
                  Darren R. Flower and
                  G. P. S. Raghava},
  title        = {AntigenDB: an immunoinformatics database of pathogen antigens},
  journal      = {Nucleic Acids Res.},
  volume       = {38},
  number       = {Database-Issue},
  pages        = {847--853},
  year         = {2010},
  url          = {https://doi.org/10.1093/nar/gkp830},
  doi          = {10.1093/NAR/GKP830},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AnsariFR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jmma/SeckerDFTCF09,
  author       = {Andrew Secker and
                  Matthew N. Davies and
                  Alex Alves Freitas and
                  Jonathan Timmis and
                  Edward Clark and
                  Darren R. Flower},
  title        = {An Artificial Immune System for Clustering Amino Acids in the Context
                  of Protein Function Classification},
  journal      = {J. Math. Model. Algorithms},
  volume       = {8},
  number       = {2},
  pages        = {103--123},
  year         = {2009},
  url          = {https://doi.org/10.1007/s10852-009-9107-3},
  doi          = {10.1007/S10852-009-9107-3},
  timestamp    = {Sun, 02 Jun 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jmma/SeckerDFTCF09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaviesSFCTF08,
  author       = {Matthew N. Davies and
                  Andrew Secker and
                  Alex Alves Freitas and
                  Edward Clark and
                  Jonathan Timmis and
                  Darren R. Flower},
  title        = {Optimizing amino acid groupings for {GPCR} classification},
  journal      = {Bioinform.},
  volume       = {24},
  number       = {18},
  pages        = {1980--1986},
  year         = {2008},
  url          = {https://doi.org/10.1093/bioinformatics/btn382},
  doi          = {10.1093/BIOINFORMATICS/BTN382},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/DaviesSFCTF08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icaris/SeckerDFTCF08,
  author       = {Andrew Secker and
                  Matthew N. Davies and
                  Alex Alves Freitas and
                  Jonathan Timmis and
                  Edward Clark and
                  Darren R. Flower},
  editor       = {Peter J. Bentley and
                  Doheon Lee and
                  Sungwon Jung},
  title        = {An Artificial Immune System for Evolving Amino Acid Clusters Tailored
                  to Protein Function Prediction},
  booktitle    = {Artificial Immune Systems, 7th International Conference, {ICARIS}
                  2008, Phuket, Thailand, August 10-13, 2008. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5132},
  pages        = {242--253},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-85072-4\_22},
  doi          = {10.1007/978-3-540-85072-4\_22},
  timestamp    = {Tue, 14 May 2019 10:00:37 +0200},
  biburl       = {https://dblp.org/rec/conf/icaris/SeckerDFTCF08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaviesSFMTF07,
  author       = {Matthew N. Davies and
                  Andrew Secker and
                  Alex Alves Freitas and
                  Miguel Mendao and
                  Jonathan Timmis and
                  Darren R. Flower},
  title        = {On the hierarchical classification of {G} protein-coupled receptors},
  journal      = {Bioinform.},
  volume       = {23},
  number       = {23},
  pages        = {3113--3118},
  year         = {2007},
  url          = {https://doi.org/10.1093/bioinformatics/btm506},
  doi          = {10.1093/BIOINFORMATICS/BTM506},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/DaviesSFMTF07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DoytchinovaF07,
  author       = {Irini A. Doytchinova and
                  Darren R. Flower},
  title        = {VaxiJen: a server for prediction of protective antigens, tumour antigens
                  and subunit vaccines},
  journal      = {{BMC} Bioinform.},
  volume       = {8},
  year         = {2007},
  url          = {https://doi.org/10.1186/1471-2105-8-4},
  doi          = {10.1186/1471-2105-8-4},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/DoytchinovaF07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/DoytchinovaF07,
  author       = {Irini A. Doytchinova and
                  Darren R. Flower},
  title        = {Predicting Class {I} Major Histocompatibility Complex {(MHC)} Binders
                  Using Multivariate Statistics: Comparison of Discriminant Analysis
                  and Multiple Linear Regression},
  journal      = {J. Chem. Inf. Model.},
  volume       = {47},
  number       = {1},
  pages        = {234--238},
  year         = {2007},
  url          = {https://doi.org/10.1021/ci600318z},
  doi          = {10.1021/CI600318Z},
  timestamp    = {Fri, 06 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/DoytchinovaF07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DoytchinovaGF06,
  author       = {Irini A. Doytchinova and
                  Pingping Guan and
                  Darren R. Flower},
  title        = {EpiJen: a server for multistep {T} cell epitope prediction},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  pages        = {131},
  year         = {2006},
  url          = {https://doi.org/10.1186/1471-2105-7-131},
  doi          = {10.1186/1471-2105-7-131},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/DoytchinovaGF06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuMXFL06,
  author       = {Wen Liu and
                  Xiangshan Meng and
                  Qiqi Xu and
                  Darren R. Flower and
                  Tongbin Li},
  title        = {Quantitative prediction of mouse class {I} {MHC} peptide binding affinity
                  using support vector machine regression {(SVR)} models},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  pages        = {182},
  year         = {2006},
  url          = {https://doi.org/10.1186/1471-2105-7-182},
  doi          = {10.1186/1471-2105-7-182},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/LiuMXFL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WanLXRFL06,
  author       = {Ji Wan and
                  Wen Liu and
                  Qiqi Xu and
                  Yongliang Ren and
                  Darren R. Flower and
                  Tongbin Li},
  title        = {{SVRMHC} prediction server for MHC-binding peptides},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  pages        = {463},
  year         = {2006},
  url          = {https://doi.org/10.1186/1471-2105-7-463},
  doi          = {10.1186/1471-2105-7-463},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/WanLXRFL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SalomonF06,
  author       = {Jesper Salomon and
                  Darren R. Flower},
  title        = {Predicting Class {II} MHC-Peptide binding: a kernel based approach
                  using similarity scores},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  pages        = {501},
  year         = {2006},
  url          = {https://doi.org/10.1186/1471-2105-7-501},
  doi          = {10.1186/1471-2105-7-501},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/SalomonF06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/HattotuwagamaTGTHDF06,
  author       = {Channa K. Hattotuwagama and
                  Christopher P. Toseland and
                  Pingping Guan and
                  Debra J. Taylor and
                  Shelley L. Hemsley and
                  Irini A. Doytchinova and
                  Darren R. Flower},
  title        = {Toward Prediction of Class {II} Mouse Major Histocompatibility Complex
                  Peptide Binding Affinity: in Silico Bioinformatic Evaluation Using
                  Partial Least Squares, a Robust Multivariate Statistical Technique},
  journal      = {J. Chem. Inf. Model.},
  volume       = {46},
  number       = {3},
  pages        = {1491--1502},
  year         = {2006},
  url          = {https://doi.org/10.1021/ci050380d},
  doi          = {10.1021/CI050380D},
  timestamp    = {Fri, 06 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/HattotuwagamaTGTHDF06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ToselandMDF06,
  author       = {Christopher P. Toseland and
                  Helen M. McSparron and
                  Matthew N. Davies and
                  Darren R. Flower},
  title        = {{PPD} v1.0 - an integrated, web-accessible database of experimentally
                  determined protein p\emph{K}\({}_{\mbox{a}}\) values},
  journal      = {Nucleic Acids Res.},
  volume       = {34},
  number       = {Database-Issue},
  pages        = {199--203},
  year         = {2006},
  url          = {https://doi.org/10.1093/nar/gkj035},
  doi          = {10.1093/NAR/GKJ035},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/ToselandMDF06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ToselandMF05,
  author       = {Christopher P. Toseland and
                  Helen M. McSparron and
                  Darren R. Flower},
  title        = {{DSD} - An integrated, web-accessible database of Dehydrogenase Enzyme
                  Stereospecificities},
  journal      = {{BMC} Bioinform.},
  volume       = {6},
  pages        = {283},
  year         = {2005},
  url          = {https://doi.org/10.1186/1471-2105-6-283},
  doi          = {10.1186/1471-2105-6-283},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ToselandMF05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/DoytchinovaWBF05,
  author       = {Irini A. Doytchinova and
                  Valerie Walshe and
                  Persephone Borrow and
                  Darren R. Flower},
  title        = {Towards the chemometric dissection of peptide - HLA-A*0201 binding
                  affinity: comparison of local and global {QSAR} models},
  journal      = {J. Comput. Aided Mol. Des.},
  volume       = {19},
  number       = {3},
  pages        = {203--212},
  year         = {2005},
  url          = {https://doi.org/10.1007/s10822-005-3993-x},
  doi          = {10.1007/S10822-005-3993-X},
  timestamp    = {Thu, 16 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcamd/DoytchinovaWBF05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/HattotuwagamaDF05,
  author       = {Channa K. Hattotuwagama and
                  Irini A. Doytchinova and
                  Darren R. Flower},
  title        = {In Silico Prediction of Peptide Binding Affinity to Class {I} Mouse
                  Major Histocompatibility Complexes: {A} Comparative Molecular Similarity
                  Index Analysis (CoMSIA) Study},
  journal      = {J. Chem. Inf. Model.},
  volume       = {45},
  number       = {5},
  pages        = {1415--1423},
  year         = {2005},
  url          = {https://doi.org/10.1021/ci049667l},
  doi          = {10.1021/CI049667L},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/HattotuwagamaDF05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/WanCF04,
  author       = {Shunzhou Wan and
                  Peter V. Coveney and
                  Darren R. Flower},
  title        = {Large-scale molecular dynamics simulations of HLA-A*0201 complexed
                  with a tumor-specific antigenic peptide: Can the {\(\alpha\)}3 and
                  {\(\beta\)}2m domains be neglected?},
  journal      = {J. Comput. Chem.},
  volume       = {25},
  number       = {15},
  pages        = {1803--1813},
  year         = {2004},
  url          = {https://doi.org/10.1002/jcc.20100},
  doi          = {10.1002/JCC.20100},
  timestamp    = {Wed, 16 Mar 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcc/WanCF04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DoytchinovaF03,
  author       = {Irini A. Doytchinova and
                  Darren R. Flower},
  title        = {Towards the in silico identification of class {II} restricted T-cell
                  epitopes: a partial least squares iterative self-consistent algorithm
                  for affinity prediction},
  journal      = {Bioinform.},
  volume       = {19},
  number       = {17},
  pages        = {2263--2270},
  year         = {2003},
  url          = {https://doi.org/10.1093/bioinformatics/btg312},
  doi          = {10.1093/BIOINFORMATICS/BTG312},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/DoytchinovaF03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/McSparronBZDF03,
  author       = {Helen M. McSparron and
                  Martin J. Blythe and
                  Christianna Zygouri and
                  Irini A. Doytchinova and
                  Darren R. Flower},
  title        = {JenPep: {A} Novel Computational Information Resource for Immunobiology
                  and Vaccinology},
  journal      = {J. Chem. Inf. Comput. Sci.},
  volume       = {43},
  number       = {4},
  pages        = {1276--1287},
  year         = {2003},
  url          = {https://doi.org/10.1021/ci030461e},
  doi          = {10.1021/CI030461E},
  timestamp    = {Thu, 14 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/McSparronBZDF03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AttwoodBFGMMMNPTUZ03,
  author       = {Terri K. Attwood and
                  Paul Bradley and
                  Darren R. Flower and
                  Anna Gaulton and
                  Neil Maudling and
                  Alex L. Mitchell and
                  G. Moulton and
                  A. Nordle and
                  K. Paine and
                  P. Taylor and
                  A. Uddin and
                  Christianna Zygouri},
  title        = {{PRINTS} and its automatic supplement, prePRINTS},
  journal      = {Nucleic Acids Res.},
  volume       = {31},
  number       = {1},
  pages        = {400--402},
  year         = {2003},
  url          = {https://doi.org/10.1093/nar/gkg030},
  doi          = {10.1093/NAR/GKG030},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AttwoodBFGMMMNPTUZ03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GuanDZF03,
  author       = {Pingping Guan and
                  Irini A. Doytchinova and
                  Christianna Zygouri and
                  Darren R. Flower},
  title        = {MHCPred: a server for quantitative prediction of peptide-MHC binding},
  journal      = {Nucleic Acids Res.},
  volume       = {31},
  number       = {13},
  pages        = {3621--3624},
  year         = {2003},
  url          = {https://doi.org/10.1093/nar/gkg510},
  doi          = {10.1093/NAR/GKG510},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/GuanDZF03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TaylorAF03,
  author       = {Paul D. Taylor and
                  Terri K. Attwood and
                  Darren R. Flower},
  title        = {{BPROMPT:} a consensus server for membrane protein prediction},
  journal      = {Nucleic Acids Res.},
  volume       = {31},
  number       = {13},
  pages        = {3698--3700},
  year         = {2003},
  url          = {https://doi.org/10.1093/nar/gkg554},
  doi          = {10.1093/NAR/GKG554},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/TaylorAF03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BlytheDF02,
  author       = {Martin J. Blythe and
                  Irini A. Doytchinova and
                  Darren R. Flower},
  title        = {JenPep: a database of quantitative functional peptide data for immunology},
  journal      = {Bioinform.},
  volume       = {18},
  number       = {3},
  pages        = {434--439},
  year         = {2002},
  url          = {https://doi.org/10.1093/bioinformatics/18.3.434},
  doi          = {10.1093/BIOINFORMATICS/18.3.434},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BlytheDF02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/DoytchinovaF02,
  author       = {Irini A. Doytchinova and
                  Darren R. Flower},
  title        = {A Comparative Molecular Similarity Index Analysis (CoMSIA) study identifies
                  an {HLA-A2} binding supermotif},
  journal      = {J. Comput. Aided Mol. Des.},
  volume       = {16},
  number       = {8-9},
  pages        = {535--544},
  year         = {2002},
  url          = {https://doi.org/10.1023/A:1021917203966},
  doi          = {10.1023/A:1021917203966},
  timestamp    = {Thu, 16 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcamd/DoytchinovaF02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SchonbachKFWB03,
  author       = {Christian Sch{\"{o}}nbach and
                  Judice L. Y. Koh and
                  Darren R. Flower and
                  Limsoon Wong and
                  Vladimir Brusic},
  title        = {FIMM, a database of functional molecular immunology: update 2002},
  journal      = {Nucleic Acids Res.},
  volume       = {30},
  number       = {1},
  pages        = {226--229},
  year         = {2002},
  url          = {https://doi.org/10.1093/nar/30.1.226},
  doi          = {10.1093/NAR/30.1.226},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/SchonbachKFWB03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AttwoodBFGMMMMMPS03,
  author       = {Terri K. Attwood and
                  Martin J. Blythe and
                  Darren R. Flower and
                  Anna Gaulton and
                  J. E. Mabey and
                  Neil Maudling and
                  L. McGregor and
                  Alex L. Mitchell and
                  G. Moulton and
                  K. Paine and
                  Philip Scordis},
  title        = {{PRINTS} and {PRINTS-S} shed light on protein ancestry},
  journal      = {Nucleic Acids Res.},
  volume       = {30},
  number       = {1},
  pages        = {239--241},
  year         = {2002},
  url          = {https://doi.org/10.1093/nar/30.1.239},
  doi          = {10.1093/NAR/30.1.239},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AttwoodBFGMMMMMPS03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AttwoodCFLMSSW00,
  author       = {Terri K. Attwood and
                  Michael D. R. Croning and
                  Darren R. Flower and
                  A. P. Lewis and
                  J. E. Mabey and
                  Philip Scordis and
                  J. N. Selley and
                  W. Wright},
  title        = {{PRINTS-S:} the database formerly known as {PRINTS}},
  journal      = {Nucleic Acids Res.},
  volume       = {28},
  number       = {1},
  pages        = {225--227},
  year         = {2000},
  url          = {https://doi.org/10.1093/nar/28.1.225},
  doi          = {10.1093/NAR/28.1.225},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AttwoodCFLMSSW00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ScordisFA99,
  author       = {Philip Scordis and
                  Darren R. Flower and
                  Terri K. Attwood},
  title        = {FingerPRINTScan: intelligent searching of the {PRINTS} motif database},
  journal      = {Bioinform.},
  volume       = {15},
  number       = {10},
  pages        = {799--806},
  year         = {1999},
  url          = {https://doi.org/10.1093/bioinformatics/15.10.799},
  doi          = {10.1093/BIOINFORMATICS/15.10.799},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ScordisFA99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AttwoodFLMMSSW99,
  author       = {Terri K. Attwood and
                  Darren R. Flower and
                  A. P. Lewis and
                  J. E. Mabey and
                  S. R. Morgan and
                  Philip Scordis and
                  J. N. Selley and
                  W. Wright},
  title        = {{PRINTS} prepares for the new millennium},
  journal      = {Nucleic Acids Res.},
  volume       = {27},
  number       = {1},
  pages        = {220--225},
  year         = {1999},
  url          = {https://doi.org/10.1093/nar/27.1.220},
  doi          = {10.1093/NAR/27.1.220},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AttwoodFLMMSSW99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/Flower98,
  author       = {Darren R. Flower},
  title        = {On the Properties of Bit String-Based Measures of Chemical Similarity},
  journal      = {J. Chem. Inf. Comput. Sci.},
  volume       = {38},
  number       = {3},
  pages        = {379--386},
  year         = {1998},
  url          = {https://doi.org/10.1021/ci970437z},
  doi          = {10.1021/CI970437Z},
  timestamp    = {Thu, 14 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/Flower98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AttwoodBFSS98,
  author       = {Terri K. Attwood and
                  Michael E. Beck and
                  Darren R. Flower and
                  Philip Scordis and
                  J. N. Selley},
  title        = {The {PRINTS} protein fingerprint database in its fifth year},
  journal      = {Nucleic Acids Res.},
  volume       = {26},
  number       = {1},
  pages        = {304--308},
  year         = {1998},
  url          = {https://doi.org/10.1093/nar/26.1.304},
  doi          = {10.1093/NAR/26.1.304},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/AttwoodBFSS98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/AttwoodABBBBCDGFKLMPPSSW97,
  author       = {Terri K. Attwood and
                  H. Avison and
                  Michael E. Beck and
                  Maria C. Bewley and
                  Alan J. Bleasby and
                  F. Brewster and
                  P. Cooper and
                  Kirill Degtyarenko and
                  A. J. Geddes and
                  Darren R. Flower and
                  M. P. Kelly and
                  Shaun Lott and
                  K. M. Measures and
                  David J. Parry{-}Smith and
                  D. N. Perkins and
                  Philip Scordis and
                  David Scott and
                  C. Worledge},
  title        = {The {PRINTS} Database of Protein Fingerprints: {A} Novel Information
                  Resource for Computational Molecular Biology},
  journal      = {J. Chem. Inf. Comput. Sci.},
  volume       = {37},
  number       = {3},
  pages        = {417--424},
  year         = {1997},
  url          = {https://doi.org/10.1021/ci960468e},
  doi          = {10.1021/CI960468E},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/AttwoodABBBBCDGFKLMPPSSW97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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