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BibTeX records: Janna Hastings
@article{DBLP:journals/ao/HastingsB23, author = {Janna Hastings and John A. Bateman}, title = {Applied ontology: Where are we now and where are we going?}, journal = {Appl. Ontology}, volume = {18}, number = {1}, pages = {1--4}, year = {2023}, url = {https://doi.org/10.3233/AO-202301}, doi = {10.3233/AO-202301}, timestamp = {Sun, 14 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ao/HastingsB23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tgdk/Chen0HJLMP0T23, author = {Jiaoyan Chen and Hang Dong and Janna Hastings and Ernesto Jim{\'{e}}nez{-}Ruiz and Vanessa L{\'{o}}pez and Pierre Monnin and Catia Pesquita and Petr Skoda and Valentina A. M. Tamma}, title = {Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities}, journal = {{TGDK}}, volume = {1}, number = {1}, pages = {5:1--5:33}, year = {2023}, url = {https://doi.org/10.4230/TGDK.1.1.5}, doi = {10.4230/TGDK.1.1.5}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tgdk/Chen0HJLMP0T23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icimth/WosnySH23, author = {Marie Wosny and Livia Strasser and Janna Hastings}, editor = {John Mantas and Parisis Gallos and Emmanouil Zoulias and Arie Hasman and Mowafa S. Househ and Martha Charalampidou and Andriana Magdalinou}, title = {Human Factors Influencing the Experience of Healthcare Professionals Using Digital Tools}, booktitle = {Healthcare Transformation with Informatics and Artificial Intelligence, {ICIMTH} 2023, 21st International Conference on Informatics, Management, and Technology in Healthcare, Athens, Greece, from 1-3 July 2023}, series = {Studies in Health Technology and Informatics}, volume = {305}, pages = {224--225}, publisher = {{IOS} Press}, year = {2023}, url = {https://doi.org/10.3233/SHTI230468}, doi = {10.3233/SHTI230468}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/icimth/WosnySH23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ki/GlauerNMH23, author = {Martin Glauer and Fabian Neuhaus and Till Mossakowski and Janna Hastings}, editor = {Dietmar Seipel and Alexander Steen}, title = {Ontology Pre-training for Poison Prediction}, booktitle = {{KI} 2023: Advances in Artificial Intelligence - 46th German Conference on AI, Berlin, Germany, September 26-29, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14236}, pages = {31--45}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-3-031-42608-7\_4}, doi = {10.1007/978-3-031-42608-7\_4}, timestamp = {Sun, 24 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ki/GlauerNMH23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:series/faia/GlauerMNMH23, author = {Martin Glauer and Till Mossakowski and Fabian Neuhaus and Adel Memariani and Janna Hastings}, editor = {Pascal Hitzler and Md. Kamruzzaman Sarker and Aaron Eberhart}, title = {Neuro-Symbolic Semantic Learning for Chemistry}, booktitle = {Compendium of Neurosymbolic Artificial Intelligence}, series = {Frontiers in Artificial Intelligence and Applications}, volume = {369}, pages = {460--484}, publisher = {{IOS} Press}, year = {2023}, url = {https://doi.org/10.3233/FAIA230153}, doi = {10.3233/FAIA230153}, timestamp = {Mon, 05 Feb 2024 20:35:57 +0100}, biburl = {https://dblp.org/rec/series/faia/GlauerMNMH23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/jowo/2023, editor = {Fumiaki Toyoshima and Megan Katsumi and Guendalina Righetti and Stefano De Giorgis and Maria M. Hedblom and Oliver Kutz and Boyan Brodaric and Michael Gr{\"{u}}ninger and Torsten Hahmann and Damion Dooley Simon and Matthew Lange and Hande K{\"{u}}{\c{c}}{\"{u}}k{-}McGinty and Anoosha Sehar Simon and Rhiannon Cameron and Bart Gajderowicz and Daniela Rosu and Janna Hastings and Davide Audrito and Luigi Di Caro and Francesca Grasso and Roberto Nai and Emilio Sulis and Loris Bozzato and Cogan Shimizu and Antoine Zimmermann and Riccardo Baratella and Stefano Borgo and Sergio de Cesare and Tiago Prince Sales}, title = {Proceedings of the Joint Ontology Workshops 2023 Episode {IX:} The Quebec Summer of Ontology co-located with the 13th International Conference on Formal Ontology in Information Systems {(FOIS} 2023), Sherbrooke, Qu{\'{e}}bec, Canada, July 19-20, 2023}, series = {{CEUR} Workshop Proceedings}, volume = {3637}, publisher = {CEUR-WS.org}, year = {2023}, url = {https://ceur-ws.org/Vol-3637}, urn = {urn:nbn:de:00743637-6}, timestamp = {Mon, 11 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/jowo/2023.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2301-08577, author = {Martin Glauer and Fabian Neuhaus and Till Mossakowski and Janna Hastings}, title = {Ontology Pre-training for Poison Prediction}, journal = {CoRR}, volume = {abs/2301.08577}, year = {2023}, url = {https://doi.org/10.48550/arXiv.2301.08577}, doi = {10.48550/ARXIV.2301.08577}, eprinttype = {arXiv}, eprint = {2301.08577}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2301-08577.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2309-17255, author = {Jiaoyan Chen and Hang Dong and Janna Hastings and Ernesto Jim{\'{e}}nez{-}Ruiz and Vanessa L{\'{o}}pez and Pierre Monnin and Catia Pesquita and Petr Skoda and Valentina A. M. Tamma}, title = {Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities}, journal = {CoRR}, volume = {abs/2309.17255}, year = {2023}, url = {https://doi.org/10.48550/arXiv.2309.17255}, doi = {10.48550/ARXIV.2309.17255}, eprinttype = {arXiv}, eprint = {2309.17255}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2309-17255.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ao/NeuhausH22, author = {Fabian Neuhaus and Janna Hastings}, title = {Ontology development is consensus creation, not (merely) representation}, journal = {Appl. Ontology}, volume = {17}, number = {4}, pages = {495--513}, year = {2022}, url = {https://doi.org/10.3233/AO-220273}, doi = {10.3233/AO-220273}, timestamp = {Thu, 05 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ao/NeuhausH22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/nesy/GlauerWMH22, author = {Martin Glauer and Robert West and Susan Michie and Janna Hastings}, editor = {Artur S. d'Avila Garcez and Ernesto Jim{\'{e}}nez{-}Ruiz}, title = {ESC-Rules: Explainable, Semantically Constrained Rule Sets}, booktitle = {Proceedings of the 16th International Workshop on Neural-Symbolic Learning and Reasoning as part of the 2nd International Joint Conference on Learning {\&} Reasoning {(IJCLR} 2022), Cumberland Lodge, Windsor Great Park, UK, September 28-30, 2022}, series = {{CEUR} Workshop Proceedings}, volume = {3212}, pages = {94--103}, publisher = {CEUR-WS.org}, year = {2022}, url = {https://ceur-ws.org/Vol-3212/paper7.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:33 +0100}, biburl = {https://dblp.org/rec/conf/nesy/GlauerWMH22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/icbo/2021, editor = {Janna Hastings and Adrien Barton}, title = {Proceedings of the International Conference on Biomedical Ontologies 2021 co-located with the Workshop on Ontologies for the Behavioural and Social Sciences (OntoBess 2021) as part of the Bolzano Summer of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September, 2021}, series = {{CEUR} Workshop Proceedings}, volume = {3073}, publisher = {CEUR-WS.org}, year = {2022}, url = {https://ceur-ws.org/Vol-3073}, urn = {urn:nbn:de:0074-3073-0}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icbo/2021.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/jowo/2022, editor = {Tiago Prince Sales and Maria M. Hedblom and He Tan and Guendalina Righetti and Oliver Kutz and Martin Glauer and Janna Hastings and Till Mossakowski and Fabian Neuhaus and Lucía {Gómez Álvarez} and Rafael Pe{\~{n}}aloza and Srdjan Vesic and Claudenir Morais Fonseca and Jona Thai and Stefano Borgo and Damion M. Dooley and Rhiannon Cameron and Lauren E. Chan and Duccio Cavalieri and Robert Warren and Hande K{\"{u}}{\c{c}}{\"{u}}k{-}McGinty and Matthew Lange and Fernanda Forea and Francesco Vitali and Bart Gajderowicz and Daniela Rosu and Aldo Gangemi and Robert Porzel and Daniel Be{\ss}ler and Mihai Pomarlan and Mohammed Diab and Alberto Olivares Alarcos}, title = {Proceedings of the Joint Ontology Workshops 2022 Episode {VIII:} The Svear Sommar of Ontology, J{\"{o}}nk{\"{o}}ping, Sweden, August 15-19, 2022}, series = {{CEUR} Workshop Proceedings}, volume = {3249}, publisher = {CEUR-WS.org}, year = {2022}, url = {https://ceur-ws.org/Vol-3249}, urn = {urn:nbn:de:0074-3249-2}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/jowo/2022.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2208-12523, author = {Martin Glauer and Robert West and Susan Michie and Janna Hastings}, title = {ESC-Rules: Explainable, Semantically Constrained Rule Sets}, journal = {CoRR}, volume = {abs/2208.12523}, year = {2022}, url = {https://doi.org/10.48550/arXiv.2208.12523}, doi = {10.48550/ARXIV.2208.12523}, eprinttype = {arXiv}, eprint = {2208.12523}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2208-12523.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2210-03497, author = {Simon Fl{\"{u}}gel and Martin Glauer and Fabian Neuhaus and Janna Hastings}, title = {When one Logic is Not Enough: Integrating First-order Annotations in {OWL} Ontologies}, journal = {CoRR}, volume = {abs/2210.03497}, year = {2022}, url = {https://doi.org/10.48550/arXiv.2210.03497}, doi = {10.48550/ARXIV.2210.03497}, eprinttype = {arXiv}, eprint = {2210.03497}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2210-03497.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2210-12026, author = {Fabian Neuhaus and Janna Hastings}, title = {Ontology Development is Consensus Creation, Not (Merely) Representation}, journal = {CoRR}, volume = {abs/2210.12026}, year = {2022}, url = {https://doi.org/10.48550/arXiv.2210.12026}, doi = {10.48550/ARXIV.2210.12026}, eprinttype = {arXiv}, eprint = {2210.12026}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2210-12026.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biomedsem/NorrisHMFZM21, author = {Emma Norris and Janna Hastings and Marta M. Marques and Ailbhe N. Finnerty and Silje Zink and Susan Michie}, title = {Why and how to engage expert stakeholders in ontology development: insights from social and behavioural sciences}, journal = {J. Biomed. Semant.}, volume = {12}, number = {1}, pages = {4}, year = {2021}, url = {https://doi.org/10.1186/s13326-021-00240-6}, doi = {10.1186/S13326-021-00240-6}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/biomedsem/NorrisHMFZM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/HastingsGMNM21, author = {Janna Hastings and Martin Glauer and Adel Memariani and Fabian Neuhaus and Till Mossakowski}, title = {Learning chemistry: exploring the suitability of machine learning for the task of structure-based chemical ontology classification}, journal = {J. Cheminformatics}, volume = {13}, number = {1}, pages = {23}, year = {2021}, url = {https://doi.org/10.1186/s13321-021-00500-8}, doi = {10.1186/S13321-021-00500-8}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcheminf/HastingsGMNM21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/amia/DivitaSHR21, author = {Guy Divita and Maryanne Sacco and Janna Hastings and Piper Ranallo}, title = {Mental Functioning Ontologies}, booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021 - November 3, 2021}, publisher = {{AMIA}}, year = {2021}, url = {https://knowledge.amia.org/74229-amia-1.4622266/t002-1.4626813/t002-1.4626814/3576816-1.4626941/3577386-1.4626938}, timestamp = {Wed, 17 Apr 2024 11:46:53 +0200}, biburl = {https://dblp.org/rec/conf/amia/DivitaSHR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icann/MemarianiGNMH21, author = {Adel Memariani and Martin Glauer and Fabian Neuhaus and Till Mossakowski and Janna Hastings}, editor = {Roberto Confalonieri and Oliver Kutz and Diego Calvanese}, title = {Automated and Explainable Ontology Extension based on Deep Learning: {A} Case Study in the Chemical Domain}, booktitle = {Proceedings of the Workshop on Data meets Applied Ontologies in Explainable {AI} {(DAO-XAI} 2021) part of Bratislava Knowledge September {(BAKS} 2021), Bratislava, Slovakia, September 18th to 19th, 2021}, series = {{CEUR} Workshop Proceedings}, volume = {2998}, publisher = {CEUR-WS.org}, year = {2021}, url = {https://ceur-ws.org/Vol-2998/paper1.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:18 +0100}, biburl = {https://dblp.org/rec/conf/icann/MemarianiGNMH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/HastingsWMNC21, author = {Janna Hastings and Robert West and Susan Michie and Caitlin Notley and Sharon Cox}, editor = {Janna Hastings and Adrien Barton}, title = {Ontologies for the Behavioural and Social Sciences: Opportunities and Challenges}, booktitle = {Proceedings of the International Conference on Biomedical Ontologies 2021 co-located with the Workshop on Ontologies for the Behavioural and Social Sciences (OntoBess 2021) as part of the Bolzano Summer of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September, 2021}, series = {{CEUR} Workshop Proceedings}, volume = {3073}, pages = {155--161}, publisher = {CEUR-WS.org}, year = {2021}, url = {https://ceur-ws.org/Vol-3073/invited1.pdf}, timestamp = {Fri, 10 Mar 2023 16:22:23 +0100}, biburl = {https://dblp.org/rec/conf/icbo/HastingsWMNC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/jowo/FlugelKNGH21, author = {Simon Fl{\"{u}}gel and Anna Kleinau and Fabian Neuhaus and Martin Glauer and Janna Hastings}, editor = {Emilio M. Sanfilippo and Oliver Kutz and Nicolas Troquard and Torsten Hahmann and Claudio Masolo and Robert Hoehndorf and Randi Vita and Maria M. Hedblom and Guendalina Righetti and Dusan Sormaz and Walter Terkaj and Tiago Prince Sales and Sergio de Cesare and Frederik Gailly and Giancarlo Guizzardi and Mark Lycett and Chris Partridge and Oscar Pastor and Daniel Be{\ss}ler and Stefano Borgo and Mohammed Diab and Aldo Gangemi and Alberto Olivares Alarcos and Mihai Pomarlan and Robert Porzel and Ludger Jansen and Mathias Brochhausen and Daniele Porello and Pawel Garbacz and Selja Sepp{\"{a}}l{\"{a}} and Michael Gr{\"{u}}ninger and Amanda Vizedom and Damion M. Dooley and Robert Warren and Hande K{\"{u}}{\c{c}}{\"{u}}k{-}McGinty and Matthew Lange and Alsayed Algergawy and Naouel Karam and Friederike Klan and Franck Michel and Ilaria Rosati}, title = {{FOWL} - An {OWL} to {FOL} Translator}, booktitle = {Proceedings of the Joint Ontology Workshops 2021 Episode {VII:} The Bolzano Summer of Knowledge co-located with the 12th International Conference on Formal Ontology in Information Systems {(FOIS} 2021), and the 12th International Conference on Biomedical Ontologies {(ICBO} 2021), Bolzano, Italy, September 11-18, 2021}, series = {{CEUR} Workshop Proceedings}, volume = {2969}, publisher = {CEUR-WS.org}, year = {2021}, url = {https://ceur-ws.org/Vol-2969/paper7-DEMO.pdf}, timestamp = {Fri, 10 Mar 2023 16:22:57 +0100}, biburl = {https://dblp.org/rec/conf/jowo/FlugelKNGH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/qurator/Hastings21, author = {Janna Hastings}, editor = {Adrian Paschke and Georg Rehm and Jamal Al Qundus and Clemens Neudecker and Lydia Pintscher}, title = {Scientific Ontologies, Digital Curation and the Learning Knowledge Ecosystem}, booktitle = {Proceedings of the Conference on Digital Curation Technologies (Qurator 2021), Berlin, Germany, February 8th - to - 12th, 2021}, series = {{CEUR} Workshop Proceedings}, volume = {2836}, publisher = {CEUR-WS.org}, year = {2021}, url = {https://ceur-ws.org/Vol-2836/qurator2021\_paper\_21.pdf}, timestamp = {Fri, 10 Mar 2023 16:22:52 +0100}, biburl = {https://dblp.org/rec/conf/qurator/Hastings21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/icbo/2020, editor = {Janna Hastings and Frank Loebe}, title = {Proceedings of the 11th International Conference on Biomedical Ontologies {(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK 2020), Virtual conference hosted in Bolzano, Italy, September 17, 2020}, series = {{CEUR} Workshop Proceedings}, volume = {2807}, publisher = {CEUR-WS.org}, year = {2021}, url = {https://ceur-ws.org/Vol-2807}, urn = {urn:nbn:de:0074-2807-4}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icbo/2020.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2109-09202, author = {Adel Memariani and Martin Glauer and Fabian Neuhaus and Till Mossakowski and Janna Hastings}, title = {Automated and Explainable Ontology Extension Based on Deep Learning: {A} Case Study in the Chemical Domain}, journal = {CoRR}, volume = {abs/2109.09202}, year = {2021}, url = {https://arxiv.org/abs/2109.09202}, eprinttype = {arXiv}, eprint = {2109.09202}, timestamp = {Mon, 27 Sep 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2109-09202.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/jowo/Hastings019, author = {Janna Hastings and Stefan Schulz}, editor = {Adrien Barton and Selja Sepp{\"{a}}l{\"{a}} and Daniele Porello}, title = {Representing Literary Characters and their Attributes in an Ontology}, booktitle = {Proceedings of the Joint Ontology Workshops 2019 Episode {V:} The Styrian Autumn of Ontology, Graz, Austria, September 23-25, 2019}, series = {{CEUR} Workshop Proceedings}, volume = {2518}, publisher = {CEUR-WS.org}, year = {2019}, url = {https://ceur-ws.org/Vol-2518/paper-WODHSA4.pdf}, timestamp = {Fri, 10 Mar 2023 16:22:57 +0100}, biburl = {https://dblp.org/rec/conf/jowo/Hastings019.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/jowo/SheridanOH19, author = {Paul Sheridan and Mikael Onsj{\"{o}} and Janna Hastings}, editor = {Adrien Barton and Selja Sepp{\"{a}}l{\"{a}} and Daniele Porello}, title = {The Literary Theme Ontology for Media Annotation and Information Retrieval}, booktitle = {Proceedings of the Joint Ontology Workshops 2019 Episode {V:} The Styrian Autumn of Ontology, Graz, Austria, September 23-25, 2019}, series = {{CEUR} Workshop Proceedings}, volume = {2518}, publisher = {CEUR-WS.org}, year = {2019}, url = {https://ceur-ws.org/Vol-2518/paper-WODHSA8.pdf}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/jowo/SheridanOH19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1905-00522, author = {Paul Sheridan and Mikael Onsj{\"{o}} and Janna Hastings}, title = {The Literary Theme Ontology for Media Annotation and Information Retrieval}, journal = {CoRR}, volume = {abs/1905.00522}, year = {2019}, url = {http://arxiv.org/abs/1905.00522}, eprinttype = {arXiv}, eprint = {1905.00522}, timestamp = {Mon, 27 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1905-00522.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/SwainstonHDMMSM16, author = {Neil Swainston and Janna Hastings and Adriano Dekker and Venkatesh Muthukrishnan and John W. May and Christoph Steinbeck and Pedro Mendes}, title = {libChEBI: an {API} for accessing the ChEBI database}, journal = {J. Cheminformatics}, volume = {8}, number = {1}, pages = {11:1--11:6}, year = {2016}, url = {https://doi.org/10.1186/s13321-016-0123-9}, doi = {10.1186/S13321-016-0123-9}, timestamp = {Tue, 05 Nov 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/SwainstonHDMMSM16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/DjoumbouEKCHOFS16, author = {Yannick Djoumbou and Roman Eisner and Craig Knox and Leonid L. Chepelev and Janna Hastings and Gareth I. Owen and Eoin Fahy and Christoph Steinbeck and Shankar Subramanian and Evan Bolton and Russell Greiner and David S. Wishart}, title = {ClassyFire: automated chemical classification with a comprehensive, computable taxonomy}, journal = {J. Cheminformatics}, volume = {8}, number = {1}, pages = {61:1--61:20}, year = {2016}, url = {https://doi.org/10.1186/s13321-016-0174-y}, doi = {10.1186/S13321-016-0174-Y}, timestamp = {Fri, 24 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/DjoumbouEKCHOFS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HastingsODEKMTS16, author = {Janna Hastings and Gareth I. Owen and Adriano Dekker and Marcus Ennis and Namrata Kale and Venkatesh Muthukrishnan and Steve Turner and Neil Swainston and Pedro Mendes and Christoph Steinbeck}, title = {ChEBI in 2016: Improved services and an expanding collection of metabolites}, journal = {Nucleic Acids Res.}, volume = {44}, number = {Database-Issue}, pages = {1214--1219}, year = {2016}, url = {https://doi.org/10.1093/nar/gkv1031}, doi = {10.1093/NAR/GKV1031}, timestamp = {Fri, 24 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/HastingsODEKMTS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biomedsem/HastingsJOTMSW15, author = {Janna Hastings and Nina Jeliazkova and Gareth I. Owen and Georgia Tsiliki and Cristian R. Munteanu and Christoph Steinbeck and Egon L. Willighagen}, title = {eNanoMapper: harnessing ontologies to enable data integration for nanomaterial risk assessment}, journal = {J. Biomed. Semant.}, volume = {6}, pages = {10}, year = {2015}, url = {https://doi.org/10.1186/s13326-015-0005-5}, doi = {10.1186/S13326-015-0005-5}, timestamp = {Mon, 28 Mar 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biomedsem/HastingsJOTMSW15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/MorenoBHMTDDTGH15, author = {Pablo A. Moreno and Stephan Beisken and Bhavana Harsha and Venkatesh Muthukrishnan and Ilinca Tudose and Adriano Dekker and Stefanie Dornfeldt and Franziska Taruttis and Ivo Grosse and Janna Hastings and Steffen Neumann and Christoph Steinbeck}, title = {BiNChE: {A} web tool and library for chemical enrichment analysis based on the ChEBI ontology}, journal = {{BMC} Bioinform.}, volume = {16}, pages = {56:1--56:7}, year = {2015}, url = {https://doi.org/10.1186/s12859-015-0486-3}, doi = {10.1186/S12859-015-0486-3}, timestamp = {Wed, 24 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/MorenoBHMTDDTGH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ijirr/Herrero-ZazoSHM15, author = {Mar{\'{\i}}a Herrero{-}Zazo and Isabel Segura{-}Bedmar and Janna Hastings and Paloma Mart{\'{\i}}nez}, title = {Application of Domain Ontologies to Natural Language Processing: {A} Case Study for Drug-Drug Interactions}, journal = {Int. J. Inf. Retr. Res.}, volume = {5}, number = {3}, pages = {19--38}, year = {2015}, url = {https://doi.org/10.4018/IJIRR.2015070102}, doi = {10.4018/IJIRR.2015070102}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ijirr/Herrero-ZazoSHM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/FuBDHWB15, author = {Gang Fu and Colin R. Batchelor and Michel Dumontier and Janna Hastings and Egon L. Willighagen and Evan Bolton}, title = {PubChemRDF: towards the semantic annotation of PubChem compound and substance databases}, journal = {J. Cheminformatics}, volume = {7}, pages = {34:1--34:15}, year = {2015}, url = {https://doi.org/10.1186/s13321-015-0084-4}, doi = {10.1186/S13321-015-0084-4}, timestamp = {Wed, 25 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcheminf/FuBDHWB15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcisd/Herrero-ZazoSHM15, author = {Mar{\'{\i}}a Herrero{-}Zazo and Isabel Segura{-}Bedmar and Janna Hastings and Paloma Mart{\'{\i}}nez}, title = {{DINTO:} Using {OWL} Ontologies and {SWRL} Rules to Infer Drug-Drug Interactions and Their Mechanisms}, journal = {J. Chem. Inf. Model.}, volume = {55}, number = {8}, pages = {1698--1707}, year = {2015}, url = {https://doi.org/10.1021/acs.jcim.5b00119}, doi = {10.1021/ACS.JCIM.5B00119}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcisd/Herrero-ZazoSHM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/HastingsSMKDOTM15, author = {Janna Hastings and Neil Swainston and Venkatesh Muthukrishnan and Namrata Kale and Adriano Dekker and Gareth I. Owen and Steve Turner and Pedro Mendes and Christoph Steinbeck}, editor = {Francisco M. Couto and Janna Hastings}, title = {ChEBI for systems biology and metabolic modelling}, booktitle = {Proceedings of the International Conference on Biomedical Ontology, {ICBO} 2015, Lisbon, Portugal, July 27-30, 2015}, series = {{CEUR} Workshop Proceedings}, volume = {1515}, publisher = {CEUR-WS.org}, year = {2015}, url = {https://ceur-ws.org/Vol-1515/poster7.pdf}, timestamp = {Fri, 10 Mar 2023 16:22:24 +0100}, biburl = {https://dblp.org/rec/conf/icbo/HastingsSMKDOTM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/icbo/2015, editor = {Francisco M. Couto and Janna Hastings}, title = {Proceedings of the International Conference on Biomedical Ontology, {ICBO} 2015, Lisbon, Portugal, July 27-30, 2015}, series = {{CEUR} Workshop Proceedings}, volume = {1515}, publisher = {CEUR-WS.org}, year = {2015}, url = {https://ceur-ws.org/Vol-1515}, urn = {urn:nbn:de:0074-1515-7}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icbo/2015.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/dagstuhl-reports/CastroHSW15, author = {Alexander Garc{\'{\i}}a Castro and Janna Hastings and Robert Stevens and Erich Weichselgartner}, title = {Digital Scholarship and Open Science in Psychology and the Behavioral Sciences (Dagstuhl Perpectives Workshop 15302)}, journal = {Dagstuhl Reports}, volume = {5}, number = {7}, pages = {42--68}, year = {2015}, url = {https://doi.org/10.4230/DagRep.5.7.42}, doi = {10.4230/DAGREP.5.7.42}, timestamp = {Mon, 21 Jan 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/dagstuhl-reports/CastroHSW15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biomedsem/HastingsBCJS14, author = {Janna Hastings and Andy Brass and Colin Caine and Caroline Jay and Robert Stevens}, title = {Evaluating the Emotion Ontology through use in the self-reporting of emotional responses at an academic conference}, journal = {J. Biomed. Semant.}, volume = {5}, pages = {38}, year = {2014}, url = {https://doi.org/10.1186/2041-1480-5-38}, doi = {10.1186/2041-1480-5-38}, timestamp = {Thu, 13 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biomedsem/HastingsBCJS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/fini/HastingsFSJPLBITM14, author = {Janna Hastings and Gwen A. Frishkoff and Barry Smith and Mark Jensen and Russell A. Poldrack and Jane Lomax and Anita E. Bandrowski and Fahim T. Imam and Jessica A. Turner and Maryann E. Martone}, title = {Interdisciplinary perspectives on the development, integration, and application of cognitive ontologies}, journal = {Frontiers Neuroinformatics}, volume = {8}, pages = {62}, year = {2014}, url = {https://doi.org/10.3389/fninf.2014.00062}, doi = {10.3389/FNINF.2014.00062}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/fini/HastingsFSJPLBITM14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/JeliazkovaDFGHJKMSSTVW14, author = {Nina Jeliazkova and Philip Doganis and Bengt Fadeel and Roland Grafstrom and Janna Hastings and Vedrin Jeliazkov and Pekka Kohonen and Cristian R. Munteanu and Haralambos Sarimveis and Bart Smeets and Georgia Tsiliki and David Vorgrimmler and Egon L. Willighagen}, editor = {Huiru Jane Zheng and Werner Dubitzky and Xiaohua Hu and Jin{-}Kao Hao and Daniel P. Berrar and Kwang{-}Hyun Cho and Yadong Wang and David R. Gilbert}, title = {The first eNanoMapper prototype: {A} substance database to support safe-by-design}, booktitle = {2014 {IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2014, Belfast, United Kingdom, November 2-5, 2014}, pages = {1--9}, publisher = {{IEEE} Computer Society}, year = {2014}, url = {https://doi.org/10.1109/BIBM.2014.6999367}, doi = {10.1109/BIBM.2014.6999367}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/JeliazkovaDFGHJKMSSTVW14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biodb/SalekHCHWMMBRSS13, author = {Reza M. Salek and Kenneth Haug and Pablo Conesa and Janna Hastings and Mark Williams and Tejasvi Mahendraker and Eamonn Maguire and Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and Philippe Rocca{-}Serra and Susanna{-}Assunta Sansone and Christoph Steinbeck}, title = {The MetaboLights repository: curation challenges in metabolomics}, journal = {Database J. Biol. Databases Curation}, volume = {2013}, year = {2013}, url = {https://doi.org/10.1093/database/bat029}, doi = {10.1093/DATABASE/BAT029}, timestamp = {Thu, 13 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biodb/SalekHCHWMMBRSS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/FerreiraHC13, author = {Jo{\~{a}}o D. Ferreira and Janna Hastings and Francisco M. Couto}, title = {Exploiting disjointness axioms to improve semantic similarity measures}, journal = {Bioinform.}, volume = {29}, number = {21}, pages = {2781--2787}, year = {2013}, url = {https://doi.org/10.1093/bioinformatics/btt491}, doi = {10.1093/BIOINFORMATICS/BTT491}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/FerreiraHC13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/TudoseHMOTDKES13, author = {Ilinca Tudose and Janna Hastings and Venkatesh Muthukrishnan and Gareth I. Owen and Steve Turner and Adriano Dekker and Namrata Kale and Marcus Ennis and Christoph Steinbeck}, title = {OntoQuery: easy-to-use web-based {OWL} querying}, journal = {Bioinform.}, volume = {29}, number = {22}, pages = {2955--2957}, year = {2013}, url = {https://doi.org/10.1093/bioinformatics/btt514}, doi = {10.1093/BIOINFORMATICS/BTT514}, timestamp = {Mon, 28 Mar 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/TudoseHMOTDKES13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/ChambersDGHVPHBMO13, author = {Jon Chambers and Mark Davies and Anna Gaulton and Anne Hersey and Sameer Velankar and Robert Petryszak and Janna Hastings and Louisa J. Bellis and Shaun McGlinchey and John P. Overington}, title = {UniChem: a unified chemical structure cross-referencing and identifier tracking system}, journal = {J. Cheminformatics}, volume = {5}, pages = {3}, year = {2013}, url = {https://doi.org/10.1186/1758-2946-5-3}, doi = {10.1186/1758-2946-5-3}, timestamp = {Thu, 14 Feb 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/ChambersDGHVPHBMO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/DalkeH13, author = {Andrew Dalke and Janna Hastings}, title = {{FMCS:} a novel algorithm for the multiple {MCS} problem}, journal = {J. Cheminformatics}, volume = {5}, number = {{S-1}}, pages = {6}, year = {2013}, url = {https://doi.org/10.1186/1758-2946-5-S1-O6}, doi = {10.1186/1758-2946-5-S1-O6}, timestamp = {Thu, 14 Feb 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/DalkeH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/WillighagenWSAWTHCW13, author = {Egon L. Willighagen and Andra Waagmeester and Ola Spjuth and Peter Ansell and Antony J. Williams and Valery Tkachenko and Janna Hastings and Bin Chen and David J. Wild}, title = {The ChEMBL database as linked open data}, journal = {J. Cheminformatics}, volume = {5}, pages = {23}, year = {2013}, url = {https://doi.org/10.1186/1758-2946-5-23}, doi = {10.1186/1758-2946-5-23}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/WillighagenWSAWTHCW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/HastingsCDEHJKMMMOSTS13, author = {Janna Hastings and Pablo Conesa and Adriano Dekker and Marcus Ennis and Kenneth Haug and Kalai Vanii Jayaseelan and Namrata Kale and Tejasvi Mahendraker and Pablo A. Moreno and Venkatesh Muthukrishnan and Gareth I. Owen and Reza M. Salek and Steve Turner and Christoph Steinbeck}, title = {Expanding natural product chemistry resources at the {EBI}}, journal = {J. Cheminformatics}, volume = {5}, number = {{S-1}}, pages = {43}, year = {2013}, url = {https://doi.org/10.1186/1758-2946-5-S1-P43}, doi = {10.1186/1758-2946-5-S1-P43}, timestamp = {Wed, 24 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcheminf/HastingsCDEHJKMMMOSTS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HastingsMDEHKMOTWS13, author = {Janna Hastings and Paula de Matos and Adriano Dekker and Marcus Ennis and Bhavana Harsha and Namrata Kale and Venkatesh Muthukrishnan and Gareth I. Owen and Steve Turner and Mark Williams and Christoph Steinbeck}, title = {The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013}, journal = {Nucleic Acids Res.}, volume = {41}, number = {Database-Issue}, pages = {456--463}, year = {2013}, url = {https://doi.org/10.1093/nar/gks1146}, doi = {10.1093/NAR/GKS1146}, timestamp = {Fri, 24 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/HastingsMDEHKMOTWS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HaugSCHMRMWNRMBSGS13, author = {Kenneth Haug and Reza M. Salek and Pablo Conesa and Janna Hastings and Paula de Matos and Mark Rijnbeek and Tejasvi Mahendraker and Mark Williams and Steffen Neumann and Philippe Rocca{-}Serra and Eamonn Maguire and Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and Susanna{-}Assunta Sansone and Julian L. Griffin and Christoph Steinbeck}, title = {MetaboLights - an open-access general-purpose repository for metabolomics studies and associated meta-data}, journal = {Nucleic Acids Res.}, volume = {41}, number = {Database-Issue}, pages = {781--786}, year = {2013}, url = {https://doi.org/10.1093/nar/gks1004}, doi = {10.1093/NAR/GKS1004}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HaugSCHMRMWNRMBSGS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/shapes/HastingsBO13, author = {Janna Hastings and Colin R. Batchelor and Mitsuhiro Okada}, editor = {Oliver Kutz and Mehul Bhatt and Stefano Borgo and Paulo E. Santos}, title = {Shape Perception in Chemistry}, booktitle = {Proceedings of the Second Interdisciplinary Workshop The Shape of Things, Rio de Janeiro, Brazil, April 3-4, 2013}, series = {{CEUR} Workshop Proceedings}, volume = {1007}, pages = {83--94}, publisher = {CEUR-WS.org}, year = {2013}, url = {https://ceur-ws.org/Vol-1007/paper6.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:19 +0100}, biburl = {https://dblp.org/rec/conf/shapes/HastingsBO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/swat4ls/Herrero-ZazoHSCMS13, author = {Mar{\'{\i}}a Herrero{-}Zazo and Janna Hastings and Isabel Segura{-}Bedmar and Samuel Croset and Paloma Mart{\'{\i}}nez and Christoph Steinbeck}, editor = {Adrian Paschke and Albert Burger and Paolo Romano and M. Scott Marshall and Andrea Splendiani}, title = {An Ontology for Drug-drug Interactions}, booktitle = {Proceedings of the 6th International Workshop on Semantic Web Applications and Tools for Life Sciences, Edinburgh, UK, December 10, 2013}, series = {{CEUR} Workshop Proceedings}, volume = {1114}, publisher = {CEUR-WS.org}, year = {2013}, url = {https://ceur-ws.org/Vol-1114/Session3\_Herrero-Zazo.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:03 +0100}, biburl = {https://dblp.org/rec/conf/swat4ls/Herrero-ZazoHSCMS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChepelevHESD12, author = {Leonid L. Chepelev and Janna Hastings and Marcus Ennis and Christoph Steinbeck and Michel Dumontier}, title = {Self-organizing ontology of biochemically relevant small molecules}, journal = {{BMC} Bioinform.}, volume = {13}, pages = {3}, year = {2012}, url = {https://doi.org/10.1186/1471-2105-13-3}, doi = {10.1186/1471-2105-13-3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChepelevHESD12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/AndradeBHS12, author = {Andr{\'{e}} Queiroz de Andrade and Ward Blond{\'{e}} and Janna Hastings and Stefan Schulz}, title = {Process attributes in bio-ontologies}, journal = {{BMC} Bioinform.}, volume = {13}, pages = {217}, year = {2012}, url = {https://doi.org/10.1186/1471-2105-13-217}, doi = {10.1186/1471-2105-13-217}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/AndradeBHS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cacm/WegnerSGBFHOOVW12, author = {J{\"{o}}rg K. Wegner and Aaron D. Sterling and Rajarshi Guha and Andreas Bender and Jean{-}Loup Faulon and Janna Hastings and Noel M. O'Boyle and John P. Overington and Herman van Vlijmen and Egon L. Willighagen}, title = {Cheminformatics}, journal = {Commun. {ACM}}, volume = {55}, number = {11}, pages = {65--75}, year = {2012}, url = {https://doi.org/10.1145/2366316.2366334}, doi = {10.1145/2366316.2366334}, timestamp = {Wed, 06 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/cacm/WegnerSGBFHOOVW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/DuanHMES12, author = {Lian Duan and Janna Hastings and Paula de Matos and Marcus Ennis and Christoph Steinbeck}, title = {Structured chemical class definitions and automated matching for chemical ontology evolution}, journal = {J. Cheminformatics}, volume = {4}, number = {{S-1}}, pages = {5}, year = {2012}, url = {https://doi.org/10.1186/1758-2946-4-S1-P5}, doi = {10.1186/1758-2946-4-S1-P5}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcheminf/DuanHMES12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/HastingsMBDSES12, author = {Janna Hastings and Despoina Magka and Colin R. Batchelor and Lian Duan and Robert Stevens and Marcus Ennis and Christoph Steinbeck}, title = {Structure-based classification and ontology in chemistry}, journal = {J. Cheminformatics}, volume = {4}, pages = {8}, year = {2012}, url = {https://doi.org/10.1186/1758-2946-4-8}, doi = {10.1186/1758-2946-4-8}, timestamp = {Thu, 14 Feb 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/HastingsMBDSES12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/aimsa/KutzHM12, author = {Oliver Kutz and Janna Hastings and Till Mossakowski}, editor = {Allan Ramsay and Gennady Agre}, title = {Modelling Highly Symmetrical Molecules: Linking Ontologies and Graphs}, booktitle = {Artificial Intelligence: Methodology, Systems, and Applications - 15th International Conference, {AIMSA} 2012, Varna, Bulgaria, September 12-15, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7557}, pages = {103--111}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-33185-5\_11}, doi = {10.1007/978-3-642-33185-5\_11}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/aimsa/KutzHM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/BatchelorH12, author = {Colin R. Batchelor and Janna Hastings}, editor = {Ronald Cornet and Robert Stevens}, title = {Waves and fields in bio-ontologies}, booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology {(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012}, series = {{CEUR} Workshop Proceedings}, volume = {897}, publisher = {CEUR-WS.org}, year = {2012}, url = {https://ceur-ws.org/Vol-897/sessionJ-paper24.pdf}, timestamp = {Fri, 10 Mar 2023 16:22:23 +0100}, biburl = {https://dblp.org/rec/conf/icbo/BatchelorH12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/HastingsMDEMTOS12, author = {Janna Hastings and Paula de Matos and Adriano Dekker and Marcus Ennis and Venkatesh Muthukrishnan and Steve Turner and Gareth I. Owen and Christoph Steinbeck}, editor = {Ronald Cornet and Robert Stevens}, title = {Modular Extensions to the ChEBI Ontology}, booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology {(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012}, series = {{CEUR} Workshop Proceedings}, volume = {897}, publisher = {CEUR-WS.org}, year = {2012}, url = {https://ceur-ws.org/Vol-897/poster\_7.pdf}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icbo/HastingsMDEMTOS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/HastingsNCMS12, author = {Janna Hastings and Nicolas Le Nov{\`{e}}re and Werner Ceusters and Kevin Mulligan and Barry Smith}, editor = {Ronald Cornet and Robert Stevens}, title = {Wanting what we don't want to want: Representing addiction in interoperable bio-ontologies}, booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology {(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012}, series = {{CEUR} Workshop Proceedings}, volume = {897}, publisher = {CEUR-WS.org}, year = {2012}, url = {https://ceur-ws.org/Vol-897/session3-paper12.pdf}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icbo/HastingsNCMS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1204-4805, author = {Janna Hastings and Colin R. Batchelor and Fabian Neuhaus and Christoph Steinbeck}, title = {What's in an 'is about' link? Chemical diagrams and the Information Artifact Ontology}, journal = {CoRR}, volume = {abs/1204.4805}, year = {2012}, url = {http://arxiv.org/abs/1204.4805}, eprinttype = {arXiv}, eprint = {1204.4805}, timestamp = {Mon, 13 Aug 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1204-4805.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BoekerTHSS11, author = {Martin Boeker and Ilinca Tudose and Janna Hastings and Daniel Schober and Stefan Schulz}, title = {Unintended consequences of existential quantifications in biomedical ontologies}, journal = {{BMC} Bioinform.}, volume = {12}, pages = {456}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-456}, doi = {10.1186/1471-2105-12-456}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/BoekerTHSS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/HastingsAEHS11, author = {Janna Hastings and Nico Adams and Marcus Ennis and Duncan Hull and Christoph Steinbeck}, title = {Chemical ontologies: what are they, what are they for and what are the challenges}, journal = {J. Cheminformatics}, volume = {3}, number = {{S-1}}, pages = {4}, year = {2011}, url = {https://doi.org/10.1186/1758-2946-3-S1-O4}, doi = {10.1186/1758-2946-3-S1-O4}, timestamp = {Tue, 29 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/HastingsAEHS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/context/HastingsCSM11, author = {Janna Hastings and Werner Ceusters and Barry Smith and Kevin Mulligan}, editor = {Michael Beigl and Henning Christiansen and Thomas Roth{-}Berghofer and Anders Kofod{-}Petersen and Kenny R. Coventry and Hedda Rahel Schmidtke}, title = {The Emotion Ontology: Enabling Interdisciplinary Research in the Affective Sciences}, booktitle = {Modeling and Using Context - 7th International and Interdisciplinary Conference, {CONTEXT} 2011, Karlsruhe, Germany, September 26-30, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6967}, pages = {119--123}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-24279-3\_14}, doi = {10.1007/978-3-642-24279-3\_14}, timestamp = {Tue, 29 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/context/HastingsCSM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/HastingsBNS11, author = {Janna Hastings and Colin R. Batchelor and Fabian Neuhaus and Christoph Steinbeck}, editor = {Olivier Bodenreider and Maryann E. Martone and Alan Ruttenberg}, title = {What's in an 'is about' Link? Chemical Diagrams and the Information Artifact Ontology}, booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY, USA, July 26-30, 2011}, series = {{CEUR} Workshop Proceedings}, volume = {833}, publisher = {CEUR-WS.org}, year = {2011}, url = {https://ceur-ws.org/Vol-833/paper26.pdf}, timestamp = {Fri, 10 Mar 2023 16:22:24 +0100}, biburl = {https://dblp.org/rec/conf/icbo/HastingsBNS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/HastingsCSM11, author = {Janna Hastings and Werner Ceusters and Barry Smith and Kevin Mulligan}, editor = {Olivier Bodenreider and Maryann E. Martone and Alan Ruttenberg}, title = {Dispositions and Processes in the Emotion Ontology}, booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY, USA, July 26-30, 2011}, series = {{CEUR} Workshop Proceedings}, volume = {833}, publisher = {CEUR-WS.org}, year = {2011}, url = {https://ceur-ws.org/Vol-833/paper10.pdf}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icbo/HastingsCSM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/HastingsMDEHJOTS11, author = {Janna Hastings and Paula de Matos and Adriano Dekker and Marcus Ennis and Kenneth Haug and Zara Josephs and Gareth I. Owen and Steve Turner and Christoph Steinbeck}, editor = {Olivier Bodenreider and Maryann E. Martone and Alan Ruttenberg}, title = {Recent Developments in the ChEBI Ontology}, booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY, USA, July 26-30, 2011}, series = {{CEUR} Workshop Proceedings}, volume = {833}, publisher = {CEUR-WS.org}, year = {2011}, url = {https://ceur-ws.org/Vol-833/paper38.pdf}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icbo/HastingsMDEHJOTS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/KutzMHCS11, author = {Oliver Kutz and Till Mossakowski and Janna Hastings and Alexander Garc{\'{\i}}a Castro and Aleksandra Sojic}, editor = {Olivier Bodenreider and Maryann E. Martone and Alan Ruttenberg}, title = {Hyperontology for the Biomedical Ontologist: {A} Sketch and Some Examples}, booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY, USA, July 26-30, 2011}, series = {{CEUR} Workshop Proceedings}, volume = {833}, publisher = {CEUR-WS.org}, year = {2011}, url = {https://ceur-ws.org/Vol-833/paper76.pdf}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icbo/KutzMHCS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icbo/YanHKSSR11, author = {Ying Yan and Janna Hastings and Jee{-}Hyub Kim and Stefan Schulz and Christoph Steinbeck and Dietrich Rebholz{-}Schuhmann}, editor = {Olivier Bodenreider and Maryann E. Martone and Alan Ruttenberg}, title = {Use of Multiple Ontologies to Characterize the Bioactivity of Small Molecules}, booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY, USA, July 26-30, 2011}, series = {{CEUR} Workshop Proceedings}, volume = {833}, publisher = {CEUR-WS.org}, year = {2011}, url = {https://ceur-ws.org/Vol-833/paper68.pdf}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icbo/YanHKSSR11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/owled/BoekerHSS11, author = {Martin Boeker and Janna Hastings and Daniel Schober and Stefan Schulz}, editor = {Michel Dumontier and M{\'{e}}lanie Courtot}, title = {A T-Box Generator for Testing Scalability of {OWL} Mereotopological Patterns}, booktitle = {Proceedings of the 8th International Workshop on {OWL:} Experiences and Directions {(OWLED} 2011), San Francisco, California, USA, June 5-6, 2011}, series = {{CEUR} Workshop Proceedings}, volume = {796}, publisher = {CEUR-WS.org}, year = {2011}, url = {https://ceur-ws.org/Vol-796/owled2011\_submission\_16.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:02 +0100}, biburl = {https://dblp.org/rec/conf/owled/BoekerHSS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/owled/HastingsJSS11, author = {Janna Hastings and Ludger Jansen and Christoph Steinbeck and Stefan Schulz}, editor = {Michel Dumontier and M{\'{e}}lanie Courtot}, title = {Modelling Threshold Phenomena in {OWL:} Metabolite Concentrations as Evidence For Disorders}, booktitle = {Proceedings of the 8th International Workshop on {OWL:} Experiences and Directions {(OWLED} 2011), San Francisco, California, USA, June 5-6, 2011}, series = {{CEUR} Workshop Proceedings}, volume = {796}, publisher = {CEUR-WS.org}, year = {2011}, url = {https://ceur-ws.org/Vol-796/owled2011\_submission\_6.pdf}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/owled/HastingsJSS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/shapes/HastingsBS11, author = {Janna Hastings and Colin R. Batchelor and Stefan Schulz}, editor = {Janna Hastings and Oliver Kutz and Mehul Bhatt and Stefano Borgo}, title = {Parts and Wholes, Shapes and Holes in Living Beings}, booktitle = {Proceedings of the First Interdisciplinary Workshop on SHAPES, Karlsruhe, Germany, September 27, 2011}, series = {{CEUR} Workshop Proceedings}, volume = {812}, publisher = {CEUR-WS.org}, year = {2011}, url = {https://ceur-ws.org/Vol-812/paper12.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:19 +0100}, biburl = {https://dblp.org/rec/conf/shapes/HastingsBS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/womo/HastingsBSS11, author = {Janna Hastings and Colin R. Batchelor and Christoph Steinbeck and Stefan Schulz}, editor = {Oliver Kutz and Thomas Schneider}, title = {Modularization Requirements in Bio-Ontologies: {A} Case Study of ChEbi}, booktitle = {Modular Ontologies - Proceedings of the Fifth International Workshop, WoMO 2011, Ljubljana, Slovenia, August 2011}, series = {Frontiers in Artificial Intelligence and Applications}, volume = {230}, pages = {63--70}, publisher = {{IOS} Press}, year = {2011}, url = {https://doi.org/10.3233/978-1-60750-799-4-63}, doi = {10.3233/978-1-60750-799-4-63}, timestamp = {Tue, 29 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/womo/HastingsBSS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/shapes/2011, editor = {Janna Hastings and Oliver Kutz and Mehul Bhatt and Stefano Borgo}, title = {Proceedings of the First Interdisciplinary Workshop on SHAPES, Karlsruhe, Germany, September 27, 2011}, series = {{CEUR} Workshop Proceedings}, volume = {812}, publisher = {CEUR-WS.org}, year = {2011}, url = {https://ceur-ws.org/Vol-812}, urn = {urn:nbn:de:0074-812-7}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/shapes/2011.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/MatosDEHHTS10, author = {Paula de Matos and Adriano Dekker and Marcus Ennis and Janna Hastings and Kenneth Haug and Steve Turner and Christoph Steinbeck}, title = {ChEBI: a chemistry ontology and database}, journal = {J. Cheminformatics}, volume = {2}, number = {{S-1}}, pages = {6}, year = {2010}, url = {https://doi.org/10.1186/1758-2946-2-S1-P6}, doi = {10.1186/1758-2946-2-S1-P6}, timestamp = {Thu, 14 Feb 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/MatosDEHHTS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MatosADEHHSTS10, author = {Paula de Matos and Rafael Alc{\'{a}}ntara and Adriano Dekker and Marcus Ennis and Janna Hastings and Kenneth Haug and Inmaculada Spiteri and Steve Turner and Christoph Steinbeck}, title = {Chemical Entities of Biological Interest: an update}, journal = {Nucleic Acids Res.}, volume = {38}, number = {Database-Issue}, pages = {249--254}, year = {2010}, url = {https://doi.org/10.1093/nar/gkp886}, doi = {10.1093/NAR/GKP886}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MatosADEHHSTS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/fois/HastingsBSS10, author = {Janna Hastings and Colin R. Batchelor and Christoph Steinbeck and Stefan Schulz}, editor = {Antony Galton and Riichiro Mizoguchi}, title = {What are chemical structures and their relations?}, booktitle = {Formal Ontology in Information Systems, Proceedings of the Sixth International Conference, {FOIS} 2010, Toronto, Canada, May 11-14, 2010}, series = {Frontiers in Artificial Intelligence and Applications}, volume = {209}, pages = {257--270}, publisher = {{IOS} Press}, year = {2010}, url = {https://doi.org/10.3233/978-1-60750-535-8-257}, doi = {10.3233/978-1-60750-535-8-257}, timestamp = {Tue, 29 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/fois/HastingsBSS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/fois/BatchelorHS10, author = {Colin R. Batchelor and Janna Hastings and Christoph Steinbeck}, editor = {Antony Galton and Riichiro Mizoguchi}, title = {Ontological dependence, dispositions and institutional reality in chemistry}, booktitle = {Formal Ontology in Information Systems, Proceedings of the Sixth International Conference, {FOIS} 2010, Toronto, Canada, May 11-14, 2010}, series = {Frontiers in Artificial Intelligence and Applications}, volume = {209}, pages = {271--284}, publisher = {{IOS} Press}, year = {2010}, url = {https://doi.org/10.3233/978-1-60750-535-8-271}, doi = {10.3233/978-1-60750-535-8-271}, timestamp = {Tue, 29 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/fois/BatchelorHS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/owled/HastingsDHHSSSHB10, author = {Janna Hastings and Michel Dumontier and Duncan Hull and Matthew Horridge and Christoph Steinbeck and Robert Stevens and Ulrike Sattler and Tertia H{\"{o}}rne and Katarina Britz}, editor = {Evren Sirin and Kendall Clark}, title = {Representing Chemicals Using OWL, Description Graphs and Rules}, booktitle = {Proceedings of the 7th International Workshop on {OWL:} Experiences and Directions {(OWLED} 2010), San Francisco, California, USA, June 21-22, 2010}, series = {{CEUR} Workshop Proceedings}, volume = {614}, publisher = {CEUR-WS.org}, year = {2010}, url = {https://ceur-ws.org/Vol-614/owled2010\_submission\_13.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:02 +0100}, biburl = {https://dblp.org/rec/conf/owled/HastingsDHHSSSHB10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/swat4ls/AdamsMDEHHHJMTS09, author = {Nico Adams and Paula de Matos and Adriano Dekker and Marcus Ennis and Janna Hastings and Kenneth Haug and Duncan Hull and Zara Josephs and Pablo A. Moreno and Steve Turner and Christoph Steinbeck}, editor = {M. Scott Marshall and Albert Burger and Paolo Romano and Adrian Paschke and Andrea Splendiani}, title = {Semantic access to chemistry data with the ChEBI ontology and web services}, booktitle = {Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, Amsterdam, The Netherlands, November 20, 2009}, series = {{CEUR} Workshop Proceedings}, volume = {559}, publisher = {CEUR-WS.org}, year = {2009}, url = {https://ceur-ws.org/Vol-559/Poster1.pdf}, timestamp = {Wed, 24 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/swat4ls/AdamsMDEHHHJMTS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DegtyarenkoMEHZMADGA08, author = {Kirill Degtyarenko and Paula de Matos and Marcus Ennis and Janna Hastings and Martin Zbinden and Alan McNaught and Rafael Alc{\'{a}}ntara and Michael Darsow and Micka{\"{e}}l Guedj and Michael Ashburner}, title = {ChEBI: a database and ontology for chemical entities of biological interest}, journal = {Nucleic Acids Res.}, volume = {36}, number = {Database-Issue}, pages = {344--350}, year = {2008}, url = {https://doi.org/10.1093/nar/gkm791}, doi = {10.1093/NAR/GKM791}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DegtyarenkoMEHZMADGA08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/swat4ls/HastingsDMES08, author = {Janna Hastings and Kirill Degtyarenko and Paula de Matos and Marcus Ennis and Christoph Steinbeck}, editor = {Albert Burger and Adrian Paschke and Paolo Romano and Andrea Splendiani}, title = {The ChEBI Ontology: An Ontology for Chemistry within a Biological Context}, booktitle = {Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences {(} {SWAT4LS} {)} Edinburgh, United Kingdom, November 28, 2008}, series = {{CEUR} Workshop Proceedings}, volume = {435}, publisher = {CEUR-WS.org}, year = {2008}, url = {https://ceur-ws.org/Vol-435/poster04.pdf}, timestamp = {Fri, 10 Mar 2023 16:23:02 +0100}, biburl = {https://dblp.org/rec/conf/swat4ls/HastingsDMES08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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