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ORCIDBibTeX records: Tina Hernandez-Boussard
@article{DBLP:journals/jamia/PillaiPGHB24,
author = {Malvika Pillai and
Jos{\'{e}} D. Posada and
Rebecca M. Gardner and
Tina Hernandez{-}Boussard and
Yair Bannett},
title = {Measuring quality-of-care in treatment of young children with attention-deficit/hyperactivity
disorder using pre-trained language models},
journal = {J. Am. Medical Informatics Assoc.},
volume = {31},
number = {4},
pages = {949--957},
year = {2024},
url = {https://doi.org/10.1093/jamia/ocae001},
doi = {10.1093/JAMIA/OCAE001},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/PillaiPGHB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/NaderalvojoudCYECPGRFHAH24,
author = {Behzad Naderalvojoud and
Catherine M. Curtin and
Chen Yanover and
Tal El{-}Hay and
Byungjin Choi and
Rae Woong Park and
Javier Gracia{-}Tabuenca and
Mary Pat Reeve and
Thomas Falconer and
Keith Humphreys and
Steven M. Asch and
Tina Hernandez{-}Boussard},
title = {Towards global model generalizability: independent cross-site feature
evaluation for patient-level risk prediction models using the {OHDSI}
network},
journal = {J. Am. Medical Informatics Assoc.},
volume = {31},
number = {5},
pages = {1051--1061},
year = {2024},
url = {https://doi.org/10.1093/jamia/ocae028},
doi = {10.1093/JAMIA/OCAE028},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/NaderalvojoudCYECPGRFHAH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/SomaniBPDJNMHR24,
author = {Sulaiman Somani and
Sujana Balla and
Allison W. Peng and
Ramzi Dudum and
Sneha Jain and
Khurram Nasir and
David J. Maron and
Tina Hernandez{-}Boussard and
F{\'{a}}tima Rodriguez},
title = {Contemporary attitudes and beliefs on coronary artery calcium from
social media using artificial intelligence},
journal = {npj Digit. Medicine},
volume = {7},
number = {1},
year = {2024},
url = {https://doi.org/10.1038/s41746-024-01077-w},
doi = {10.1038/S41746-024-01077-W},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/npjdm/SomaniBPDJNMHR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2402-00955,
author = {Yuqing Wang and
Malvika Pillai and
Yun Zhao and
Catherine M. Curtin and
Tina Hernandez{-}Boussard},
title = {FairEHR-CLP: Towards Fairness-Aware Clinical Predictions with Contrastive
Learning in Multimodal Electronic Health Records},
journal = {CoRR},
volume = {abs/2402.00955},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2402.00955},
doi = {10.48550/ARXIV.2402.00955},
eprinttype = {arXiv},
eprint = {2402.00955},
timestamp = {Fri, 09 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2402-00955.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/SteyaertPNKHGG23,
author = {Sandra Steyaert and
Marija Pizurica and
Divya Nagaraj and
Priya Khandelwal and
Tina Hernandez{-}Boussard and
Andrew J. Gentles and
Olivier Gevaert},
title = {Multimodal data fusion for cancer biomarker discovery with deep learning},
journal = {Nat. Mac. Intell.},
volume = {5},
number = {4},
pages = {351--362},
year = {2023},
url = {https://doi.org/10.1038/s42256-023-00633-5},
doi = {10.1038/S42256-023-00633-5},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/natmi/SteyaertPNKHGG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/HondSKCSH23,
author = {Anne A. H. de Hond and
Vaibhavi B. Shah and
Ilse M. J. Kant and
Ben Van Calster and
Ewout W. Steyerberg and
Tina Hernandez{-}Boussard},
title = {Perspectives on validation of clinical predictive algorithms},
journal = {npj Digit. Medicine},
volume = {6},
year = {2023},
url = {https://doi.org/10.1038/s41746-023-00832-9},
doi = {10.1038/S41746-023-00832-9},
timestamp = {Sun, 31 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/npjdm/HondSKCSH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/HajoujiSZHACCH23,
author = {Oualid El Hajouji and
Ran Sun and
Alban Zammit and
Keith Humphreys and
Steven M. Asch and
Ian Carroll and
Catherine M. Curtin and
Tina Hernandez{-}Boussard},
title = {Prediction of opioid-related outcomes in a medicaid surgical population:
Evidence to guide postoperative opiate therapy and monitoring},
journal = {PLoS Comput. Biol.},
volume = {19},
number = {8},
year = {2023},
url = {https://doi.org/10.1371/journal.pcbi.1011376},
doi = {10.1371/JOURNAL.PCBI.1011376},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/HajoujiSZHACCH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaai/ZhangHW23,
author = {Wenbin Zhang and
Tina Hernandez{-}Boussard and
Jeremy C. Weiss},
editor = {Brian Williams and
Yiling Chen and
Jennifer Neville},
title = {Censored Fairness through Awareness},
booktitle = {Thirty-Seventh {AAAI} Conference on Artificial Intelligence, {AAAI}
2023, Thirty-Fifth Conference on Innovative Applications of Artificial
Intelligence, {IAAI} 2023, Thirteenth Symposium on Educational Advances
in Artificial Intelligence, {EAAI} 2023, Washington, DC, USA, February
7-14, 2023},
pages = {14611--14619},
publisher = {{AAAI} Press},
year = {2023},
url = {https://doi.org/10.1609/aaai.v37i12.26708},
doi = {10.1609/AAAI.V37I12.26708},
timestamp = {Fri, 01 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/aaai/ZhangHW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mie/HondBFRBKSH23,
author = {Anne De Hond and
Marieke M. van Buchem and
Claudio Fanconi and
Mohana Roy and
Douglas W. Blayney and
Ilse M. J. Kant and
Ewout W. Steyerberg and
Tina Hernandez{-}Boussard},
editor = {Maria H{\"{a}}gglund and
Madeleine Blusi and
Stefano Bonacina and
Lina Nilsson and
Inge Cort Madsen and
Sylvia Pelayo and
Anne Moen and
Arriel Benis and
Lars Lindsk{\"{o}}ld and
Parisis Gallos},
title = {Predicting Depression Risk in Patients with Cancer Using Multimodal
Data},
booktitle = {Caring is Sharing - Exploiting the Value in Data for Health and Innovation
- Proceedings of {MIE} 2023, Gothenburg, Sweden, 22 - 25 May 2023},
series = {Studies in Health Technology and Informatics},
volume = {302},
pages = {817--818},
publisher = {{IOS} Press},
year = {2023},
url = {https://doi.org/10.3233/SHTI230274},
doi = {10.3233/SHTI230274},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/mie/HondBFRBKSH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fdgth/BozkurtMSBH22,
author = {Selen Bozkurt and
Christopher J. Magnani and
Martin G. Seneviratne and
James D. Brooks and
Tina Hernandez{-}Boussard},
title = {Expanding the Secondary Use of Prostate Cancer Real World Data: Automated
Classifiers for Clinical and Pathological Stage},
journal = {Frontiers Digit. Health},
volume = {4},
pages = {793316},
year = {2022},
url = {https://doi.org/10.3389/fdgth.2022.793316},
doi = {10.3389/FDGTH.2022.793316},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fdgth/BozkurtMSBH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fdgth/CoquetZHHAOCH22,
author = {Jean Coquet and
Alban Zammit and
Oualid El Hajouji and
Keith Humphreys and
Steven M. Asch and
Thomas F. Osborne and
Catherine M. Curtin and
Tina Hernandez{-}Boussard},
title = {Changes in postoperative opioid prescribing across three diverse healthcare
systems, 2010-2020},
journal = {Frontiers Digit. Health},
volume = {4},
year = {2022},
url = {https://doi.org/10.3389/fdgth.2022.995497},
doi = {10.3389/FDGTH.2022.995497},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fdgth/CoquetZHHAOCH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fdgth/StahlbergAAABBBCCCDDGGHHJKLMMMMRR22,
author = {Eric A. Stahlberg and
Mohamed Abdel{-}Rahman and
Boris Aguilar and
Alireza Asadpoure and
Robert A. Beckman and
Lynn L. Borkon and
Jeffrey N. Bryan and
Colleen M. Cebulla and
Young Hwan Chang and
Ansu Chatterjee and
Jun Deng and
Sepideh Dolatshahi and
Olivier Gevaert and
Emily J. Greenspan and
Wenrui Hao and
Tina Hernandez{-}Boussard and
Pamela R. Jackson and
Marieke L. Kuijjer and
Adrian Lee and
Paul Macklin and
Subha Madhavan and
Matthew D. McCoy and
Navid Mohammad Mirzaei and
Talayeh Razzaghi and
Heber L. Rocha and
Leili Shahriyari and
Ilya Shmulevich and
Daniel G. Stover and
Yi Sun and
Tanveer F. Syeda{-}Mahmood and
Jinhua Wang and
Qi Wang and
Ioannis K. Zervantonakis},
title = {Exploring approaches for predictive cancer patient digital twins:
Opportunities for collaboration and innovation},
journal = {Frontiers Digit. Health},
volume = {4},
year = {2022},
url = {https://doi.org/10.3389/fdgth.2022.1007784},
doi = {10.3389/FDGTH.2022.1007784},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fdgth/StahlbergAAABBBCCCDDGGHHJKLMMMMRR22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/frai/LossioVenturaSBH22,
author = {Juan Antonio Lossio{-}Ventura and
Ran Sun and
Sebastien Boussard and
Tina Hernandez{-}Boussard},
title = {Clinical concept recognition: Evaluation of existing systems on EHRs},
journal = {Frontiers Artif. Intell.},
volume = {5},
year = {2022},
url = {https://doi.org/10.3389/frai.2022.1051724},
doi = {10.3389/FRAI.2022.1051724},
timestamp = {Wed, 08 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/frai/LossioVenturaSBH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmi/Lossio-VenturaS22,
author = {Juan Antonio Lossio{-}Ventura and
Wenyu Song and
Michael Sainlaire and
Patricia C. Dykes and
Tina Hernandez{-}Boussard},
title = {Opioid2MME: Standardizing opioid prescriptions to morphine milligram
equivalents from electronic health records},
journal = {Int. J. Medical Informatics},
volume = {162},
pages = {104739},
year = {2022},
url = {https://doi.org/10.1016/j.ijmedinf.2022.104739},
doi = {10.1016/J.IJMEDINF.2022.104739},
timestamp = {Mon, 16 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijmi/Lossio-VenturaS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmi/WangHHHTH22,
author = {Sophia Y. Wang and
Justin Huang and
Hannah Hwang and
Wendeng Hu and
Shiqi Tao and
Tina Hernandez{-}Boussard},
title = {Leveraging weak supervision to perform named entity recognition in
electronic health records progress notes to identify the ophthalmology
exam},
journal = {Int. J. Medical Informatics},
volume = {167},
pages = {104864},
year = {2022},
url = {https://doi.org/10.1016/j.ijmedinf.2022.104864},
doi = {10.1016/J.IJMEDINF.2022.104864},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijmi/WangHHHTH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/HondBH22,
author = {Anne A. H. de Hond and
Marieke M. van Buchem and
Tina Hernandez{-}Boussard},
title = {Picture a data scientist: a call to action for increasing diversity,
equity, and inclusion in the age of {AI}},
journal = {J. Am. Medical Informatics Assoc.},
volume = {29},
number = {12},
pages = {2178--2181},
year = {2022},
url = {https://doi.org/10.1093/jamia/ocac156},
doi = {10.1093/JAMIA/OCAC156},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jamia/HondBH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BiermanBHHM22,
author = {Arlene Bierman and
Helen Burstin and
Tina Hernandez{-}Boussard and
Maia Hightower and
Nikhil Mull},
title = {The Impact of Algorithms on Racial and Ethnic Disparities in Health
and Healthcare},
booktitle = {{AMIA} 2022, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 5-9, 2022},
publisher = {{AMIA}},
year = {2022},
url = {https://knowledge.amia.org/76677-amia-1.4637602/f005-1.4642489/f005-1.4642490/106-1.4642620/627-1.4642617},
timestamp = {Wed, 17 Apr 2024 11:46:45 +0200},
biburl = {https://dblp.org/rec/conf/amia/BiermanBHHM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BuchemMCH22,
author = {Marieke M. van Buchem and
Hamza El Mosor and
Jean Coquet and
Tina Hernandez{-}Boussard},
title = {Using Reddit to detect suicidal ideation from patient emails},
booktitle = {{AMIA} 2022, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 5-9, 2022},
publisher = {{AMIA}},
year = {2022},
url = {https://knowledge.amia.org/76677-amia-1.4637602/f007-1.4641746/f007-1.4641747/172-1.4642112/1173-1.4642109},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/BuchemMCH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LanglotzWHD22,
author = {Curtis P. Langlotz and
Thomas Wang and
Tina Hernandez{-}Boussard and
Irene Dankwa{-}Mullan},
title = {Implications of Data As a Public Good: Charting a Path Toward Diagnostic
Excellence},
booktitle = {{AMIA} 2022, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 5-9, 2022},
publisher = {{AMIA}},
year = {2022},
url = {https://knowledge.amia.org/76677-amia-1.4637602/f005-1.4642489/f005-1.4642490/217-1.4642557/731-1.4642554},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/LanglotzWHD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/NaderalvojoudHS22,
author = {Behzad Naderalvojoud and
Anne A. H. de Hond and
Alessandro Shapiro and
Jean Coquet and
Tina Seto and
Tina Hernandez{-}Boussard},
title = {Predicting Prolonged Opioid Use Following Surgery Using Machine Learning:
Challenges and Outcomes},
booktitle = {{AMIA} 2022, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 5-9, 2022},
publisher = {{AMIA}},
year = {2022},
url = {https://knowledge.amia.org/76677-amia-1.4637602/f007-1.4641746/f007-1.4641747/814-1.4641928/887-1.4641925},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/NaderalvojoudHS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ZammitHCSR22,
author = {Alban Zammit and
Tina Hernandez{-}Boussard and
Jean Coquet and
Ashish Sarraju and
Fatima Fatiguez},
title = {Using Deep Learning-based Natural Language Processing to Identify
Reasons for Statin Non-Adherence in Patients with Atherosclerotic
Cardiovascular Disease},
booktitle = {{AMIA} 2022, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 5-9, 2022},
publisher = {{AMIA}},
year = {2022},
url = {https://knowledge.amia.org/76677-amia-1.4637602/f007-1.4641746/f007-1.4641747/263-1.4641763/1054-1.4641760},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ZammitHCSR22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-13860,
author = {Claudio Fanconi and
Marieke M. van Buchem and
Tina Hernandez{-}Boussard},
title = {Natural Language Processing Methods to Identify Oncology Patients
at High Risk for Acute Care with Clinical Notes},
journal = {CoRR},
volume = {abs/2209.13860},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2209.13860},
doi = {10.48550/ARXIV.2209.13860},
eprinttype = {arXiv},
eprint = {2209.13860},
timestamp = {Mon, 02 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2209-13860.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/artmed/Lossio-VenturaG21,
author = {Juan Antonio Lossio{-}Ventura and
Sergio Gonzales and
Juandiego Morzan and
Hugo Alatrista{-}Salas and
Tina Hernandez{-}Boussard and
Jiang Bian},
title = {Evaluation of clustering and topic modeling methods over health-related
tweets and emails},
journal = {Artif. Intell. Medicine},
volume = {117},
pages = {102096},
year = {2021},
url = {https://doi.org/10.1016/j.artmed.2021.102096},
doi = {10.1016/J.ARTMED.2021.102096},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/artmed/Lossio-VenturaG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmi/WangTH21,
author = {Sophia Y. Wang and
Benjamin Tseng and
Tina Hernandez{-}Boussard},
title = {Development and evaluation of novel ophthalmology domain-specific
neural word embeddings to predict visual prognosis},
journal = {Int. J. Medical Informatics},
volume = {150},
pages = {104464},
year = {2021},
url = {https://doi.org/10.1016/j.ijmedinf.2021.104464},
doi = {10.1016/J.IJMEDINF.2021.104464},
timestamp = {Tue, 15 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijmi/WangTH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/RoosliRH21,
author = {Eliane R{\"{o}}{\"{o}}sli and
Brian Rice and
Tina Hernandez{-}Boussard},
title = {Bias at warp speed: how {AI} may contribute to the disparities gap
in the time of {COVID-19}},
journal = {J. Am. Medical Informatics Assoc.},
volume = {28},
number = {1},
pages = {190--192},
year = {2021},
url = {https://doi.org/10.1093/jamia/ocaa210},
doi = {10.1093/JAMIA/OCAA210},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/RoosliRH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Hernandez-Boussard21,
author = {Tina Hernandez{-}Boussard and
Matthew P. Lungren and
Nigam Shah},
title = {Conflicting information from the Food and Drug Administration: Missed
opportunity to lead standards for safe and effective medical artificial
intelligence solutions},
journal = {J. Am. Medical Informatics Assoc.},
volume = {28},
number = {6},
pages = {1353--1355},
year = {2021},
url = {https://doi.org/10.1093/jamia/ocab035},
doi = {10.1093/JAMIA/OCAB035},
timestamp = {Fri, 22 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jamia/Hernandez-Boussard21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Hernandez-Boussard21a,
author = {Tina Hernandez{-}Boussard and
Matthew P. Lungren and
Nigam Shah},
title = {Corrigendum: Conflicting information from the Food and Drug Administration:
Missed opportunity to lead standards for safe and effective medical
artificial intelligence solutions},
journal = {J. Am. Medical Informatics Assoc.},
volume = {28},
number = {7},
pages = {1600},
year = {2021},
url = {https://doi.org/10.1093/jamia/ocab063},
doi = {10.1093/JAMIA/OCAB063},
timestamp = {Wed, 08 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/Hernandez-Boussard21a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/SunBH21,
author = {Ran Sun and
Douglas W. Blayney and
Tina Hernandez{-}Boussard},
title = {Health management via telemedicine: Learning from the {COVID-19} experience},
journal = {J. Am. Medical Informatics Assoc.},
volume = {28},
number = {11},
pages = {2536--2540},
year = {2021},
url = {https://doi.org/10.1093/jamia/ocab145},
doi = {10.1093/JAMIA/OCAB145},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jamia/SunBH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/CarmichaelCSSGA21,
author = {Harris Carmichael and
Jean Coquet and
Ran Sun and
Shengtian Sang and
Danielle Groat and
Steven M. Asch and
Joseph Bledsoe and
Ithan D. Peltan and
Jason R. Jacobs and
Tina Hernandez{-}Boussard},
title = {Learning from past respiratory failure patients to triage {COVID-19}
patient ventilator needs: {A} multi-institutional study},
journal = {J. Biomed. Informatics},
volume = {119},
pages = {103802},
year = {2021},
url = {https://doi.org/10.1016/j.jbi.2021.103802},
doi = {10.1016/J.JBI.2021.103802},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/CarmichaelCSSGA21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BozkurtH21,
author = {Selen Bozkurt and
Tina Hernandez{-}Boussard},
title = {Expanding the secondary use of prostate cancer real world data: Automated
Classifiers for Clinical and Pathological Stage},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t005-1.4625076/t005-1.4625077/3577409-1.4625891/3577468-1.4625888},
timestamp = {Wed, 17 Apr 2024 11:46:53 +0200},
biburl = {https://dblp.org/rec/conf/amia/BozkurtH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/hij/WengTTDACCMH20,
author = {Yingjie Weng and
Lu Tian and
Dario Tedesco and
Karishma Desai and
Steven M. Asch and
Ian Carroll and
Catherine M. Curtin and
Kathryn M. McDonald and
Tina Hernandez{-}Boussard},
title = {Trajectory analysis for postoperative pain using electronic health
records: {A} nonparametric method with robust linear regression and
K-medians cluster analysis},
journal = {Health Informatics J.},
volume = {26},
number = {2},
pages = {1404--1418},
year = {2020},
url = {https://doi.org/10.1177/1460458219881339},
doi = {10.1177/1460458219881339},
timestamp = {Fri, 06 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/hij/WengTTDACCMH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmi/WangPTH20,
author = {Sophia Y. Wang and
Suzann Pershing and
Elaine Tran and
Tina Hernandez{-}Boussard},
title = {Automated extraction of ophthalmic surgery outcomes from the electronic
health record},
journal = {Int. J. Medical Informatics},
volume = {133},
year = {2020},
url = {https://doi.org/10.1016/j.ijmedinf.2019.104007},
doi = {10.1016/J.IJMEDINF.2019.104007},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijmi/WangPTH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/BozkurtCSSLIH20,
author = {Selen Bozkurt and
Eli M. Cahan and
Martin G. Seneviratne and
Ran Sun and
Juan Antonio Lossio{-}Ventura and
John P. A. Ioannidis and
Tina Hernandez{-}Boussard},
title = {Reporting of demographic data and representativeness in machine learning
models using electronic health records},
journal = {J. Am. Medical Informatics Assoc.},
volume = {27},
number = {12},
pages = {1878--1884},
year = {2020},
url = {https://doi.org/10.1093/jamia/ocaa164},
doi = {10.1093/JAMIA/OCAA164},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/BozkurtCSSLIH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Hernandez-Boussard20,
author = {Tina Hernandez{-}Boussard and
Selen Bozkurt and
John P. A. Ioannidis and
Nigam H. Shah},
title = {{MINIMAR} (MINimum Information for Medical {AI} Reporting): Developing
reporting standards for artificial intelligence in health care},
journal = {J. Am. Medical Informatics Assoc.},
volume = {27},
number = {12},
pages = {2011--2015},
year = {2020},
url = {https://doi.org/10.1093/jamia/ocaa088},
doi = {10.1093/JAMIA/OCAA088},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/Hernandez-Boussard20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BozkurtAYBBH20,
author = {Selen Bozkurt and
Amee D. Azad and
Melih Yilmaz and
James D. Brooks and
Douglas W. Blayney and
Tina Hernandez{-}Boussard},
title = {Distinct Clusters of Patient reported outcome {(PRO)} trajectories
among oncology patients receiving chemotherapy},
booktitle = {{AMIA} 2020, American Medical Informatics Association Annual Symposium,
Virtual Event, USA, November 14-18, 2020},
publisher = {{AMIA}},
year = {2020},
url = {https://knowledge.amia.org/72332-amia-1.4602255/t004-1.4605866/t004-1.4605867/3416998-1.4606180/3410811-1.4606177},
timestamp = {Wed, 17 Apr 2024 11:47:01 +0200},
biburl = {https://dblp.org/rec/conf/amia/BozkurtAYBBH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Hernandez-Boussard20,
author = {Tina Hernandez{-}Boussard and
Juan Antonio Lossio{-}Ventura and
Ania Syrowatka and
Wenyu Song and
Patricia C. Dykes},
title = {Standardizing Opioid Prescriptions across Systems: Challenges, Strengths,
and Opportunities},
booktitle = {{AMIA} 2020, American Medical Informatics Association Annual Symposium,
Virtual Event, USA, November 14-18, 2020},
publisher = {{AMIA}},
year = {2020},
url = {https://knowledge.amia.org/72332-amia-1.4602255/t002-1.4606605/t002-1.4606606/3413767-1.4606706/3411673-1.4606703},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/Hernandez-Boussard20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ShoaibiWRMH20,
author = {Azadeh Shoaibi and
Hui{-}Lee Wong and
Christian Reich and
Keran Moll and
Tina Hernandez{-}Boussard},
title = {The Food and Drug Administration {(FDA)} Center for Biologics Evaluation
and Research {(CBER)} Biologics Effectiveness and Safety {(BEST)}
Initiative: How Informatics Can Assist the Secondary Use of Electronic
Health Records to Inform Regulatory Decisions},
booktitle = {{AMIA} 2020, American Medical Informatics Association Annual Symposium,
Virtual Event, USA, November 14-18, 2020},
publisher = {{AMIA}},
year = {2020},
url = {https://knowledge.amia.org/72332-amia-1.4602255/t002-1.4606605/t002-1.4606606/3413651-1.4606622/3411272-1.4606619},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ShoaibiWRMH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/VanderpoolOJSH20,
author = {Robin C. Vanderpool and
April Oh and
Roxanne E. Jensen and
Urmimala Sarkar and
Tina Hernandez{-}Boussard},
title = {Navigating the National Cancer Institute Grants Process: {A} Primer
for Informatics Researchers},
booktitle = {{AMIA} 2020, American Medical Informatics Association Annual Symposium,
Virtual Event, USA, November 14-18, 2020},
publisher = {{AMIA}},
year = {2020},
url = {https://knowledge.amia.org/72332-amia-1.4602255/t002-1.4606605/t002-1.4606606/3413816-1.4606616/3411262-1.4606613},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/VanderpoolOJSH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Hernandez-Boussard19,
author = {Tina Hernandez{-}Boussard and
Keri L. Monda and
Blai Coll Crespo and
Dan Riskin},
title = {Real world evidence in cardiovascular medicine: ensuring data validity
in electronic health record-based studies},
journal = {J. Am. Medical Informatics Assoc.},
volume = {26},
number = {11},
pages = {1189--1194},
year = {2019},
url = {https://doi.org/10.1093/jamia/ocz119},
doi = {10.1093/JAMIA/OCZ119},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/Hernandez-Boussard19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/CoquetBKFBBH19,
author = {Jean Coquet and
Selen Bozkurt and
Kathleen M. Kan and
Michelle Ferrari and
Douglas W. Blayney and
James D. Brooks and
Tina Hernandez{-}Boussard},
title = {Comparison of orthogonal {NLP} methods for clinical phenotyping and
assessment of bone scan utilization among prostate cancer patients},
journal = {J. Biomed. Informatics},
volume = {94},
year = {2019},
url = {https://doi.org/10.1016/j.jbi.2019.103184},
doi = {10.1016/J.JBI.2019.103184},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/CoquetBKFBBH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/CahanHIR19,
author = {Eli M. Cahan and
Tina Hernandez{-}Boussard and
Sonoo Thadaney Israni and
Daniel L. Rubin},
title = {Putting the data before the algorithm in big data addressing personalized
healthcare},
journal = {npj Digit. Medicine},
volume = {2},
year = {2019},
url = {https://doi.org/10.1038/s41746-019-0157-2},
doi = {10.1038/S41746-019-0157-2},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/npjdm/CahanHIR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/Lossio-VenturaM19,
author = {Juan Antonio Lossio{-}Ventura and
Juandiego Morzan and
Hugo Alatrista{-}Salas and
Tina Hernandez{-}Boussard and
Jiang Bian},
editor = {Illhoi Yoo and
Jinbo Bi and
Xiaohua Hu},
title = {Clustering and topic modeling over tweets: {A} comparison over a health
dataset},
booktitle = {2019 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2019, San Diego, CA, USA, November 18-21, 2019},
pages = {1544--1547},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/BIBM47256.2019.8983167},
doi = {10.1109/BIBM47256.2019.8983167},
timestamp = {Fri, 09 Apr 2021 17:11:15 +0200},
biburl = {https://dblp.org/rec/conf/bibm/Lossio-VenturaM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/Lossio-VenturaB19,
author = {Juan Antonio Lossio{-}Ventura and
Sebastien Boussard and
Juandiego Morzan and
Tina Hernandez{-}Boussard},
editor = {Illhoi Yoo and
Jinbo Bi and
Xiaohua Hu},
title = {Clinical named-entity recognition: {A} short comparison},
booktitle = {2019 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2019, San Diego, CA, USA, November 18-21, 2019},
pages = {1548--1550},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/BIBM47256.2019.8983406},
doi = {10.1109/BIBM47256.2019.8983406},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/Lossio-VenturaB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/WangHCP19,
author = {Sophia Y. Wang and
Tina Hernandez{-}Boussard and
Robert T. Chang and
Suzann Pershing},
editor = {Lucila Ohno{-}Machado and
Brigitte S{\'{e}}roussi},
title = {Understanding Patient Attitudes Toward Multifocal Intraocular Lenses
in Online Medical Forums Through Sentiment Analysis},
booktitle = {{MEDINFO} 2019: Health and Wellbeing e-Networks for All - Proceedings
of the 17th World Congress on Medical and Health Informatics, Lyon,
France, 25-30 August 2019},
series = {Studies in Health Technology and Informatics},
volume = {264},
pages = {1378--1382},
publisher = {{IOS} Press},
year = {2019},
url = {https://doi.org/10.3233/SHTI190453},
doi = {10.3233/SHTI190453},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/WangHCP19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/LenainSBBBH19,
author = {Raphael Lenain and
Martin G. Seneviratne and
Selen Bozkurt and
Douglas W. Blayney and
James D. Brooks and
Tina Hernandez{-}Boussard},
editor = {Lucila Ohno{-}Machado and
Brigitte S{\'{e}}roussi},
title = {Machine Learning Approaches for Extracting Stage from Pathology Reports
in Prostate Cancer},
booktitle = {{MEDINFO} 2019: Health and Wellbeing e-Networks for All - Proceedings
of the 17th World Congress on Medical and Health Informatics, Lyon,
France, 25-30 August 2019},
series = {Studies in Health Technology and Informatics},
volume = {264},
pages = {1522--1523},
publisher = {{IOS} Press},
year = {2019},
url = {https://doi.org/10.3233/SHTI190515},
doi = {10.3233/SHTI190515},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/medinfo/LenainSBBBH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/SeneviratneKH19,
author = {Martin G. Seneviratne and
Michael G. Kahn and
Tina Hernandez{-}Boussard},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Marylyn D. Ritchie and
Teri E. Klein},
title = {Merging heterogeneous clinical data to enable knowledge discovery},
booktitle = {Biocomputing 2019: Proceedings of the Pacific Symposium, The Big Island
of Hawaii, Hawaii, USA, January 3-7, 2019},
pages = {439--443},
year = {2019},
url = {http://psb.stanford.edu/psb-online/proceedings/psb19/wkshop-merging.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/SeneviratneKH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BozkurtIMFRBH18,
author = {Selen Bozkurt and
Jung Park In and
Kathleen Mary Kan and
Michelle Ferrari and
Daniel L. Rubin and
James D. Brooks and
Tina Hernandez{-}Boussard},
title = {An Automated Feature Engineering for Digital Rectal Examination Documentation
using Natural Language Processing},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t004-1.4263758/t004-1.4263759/2976418-1.4264045/2976774-1.4264042},
timestamp = {Wed, 17 Apr 2024 11:47:15 +0200},
biburl = {https://dblp.org/rec/conf/amia/BozkurtIMFRBH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/SeneviratneBBSH18,
author = {Martin G. Seneviratne and
Juan M. Banda and
James D. Brooks and
Nigam Shah and
Tina Hernandez{-}Boussard},
title = {Identifying cases of metastatic prostate cancer using machine learning
on electronic health records},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t005-1.4263615/t005-1.4263616/2976951-1.4263656/2975482-1.4263653},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/SeneviratneBBSH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/WangPH18,
author = {Sophia Y. Wang and
Suzann Pershing and
Tina Hernandez{-}Boussard},
title = {A Pipeline to Measure Ophthalmic Surgery Outcomes from the Electronic
Health Record},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t007-1.4262189/t007-1.4262190/2976622-1.4262284/2974159-1.4262281},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/WangPH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Hernandez-Boussard17,
author = {Tina Hernandez{-}Boussard and
Panayotis Kourdis and
Wen{-}wai Yim and
Rajendra Dulal and
Douglas W. Blayney and
James D. Brooks},
title = {Mining Electronic Health Records to Extract Patient-Centered Outcomes
Following Prostate cancer Treatment},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t003-1.4258387/f003-1.4258388/2732157-1.4258725/2732222-1.4258722},
timestamp = {Wed, 17 Apr 2024 11:47:24 +0200},
biburl = {https://dblp.org/rec/conf/amia/Hernandez-Boussard17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/YimTCH17,
author = {Wen{-}wai Yim and
Dario Tedesco and
Catherine M. Curtin and
Tina Hernandez{-}Boussard},
editor = {Kevin Bretonnel Cohen and
Dina Demner{-}Fushman and
Sophia Ananiadou and
Junichi Tsujii},
title = {Annotation of pain and anesthesia events for surgery-related processes
and outcomes extraction},
booktitle = {BioNLP 2017, Vancouver, Canada, August 4, 2017},
pages = {200--205},
publisher = {Association for Computational Linguistics},
year = {2017},
url = {https://doi.org/10.18653/v1/W17-2325},
doi = {10.18653/V1/W17-2325},
timestamp = {Fri, 06 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bionlp/YimTCH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Hernandez-Boussard15,
author = {Tina Hernandez{-}Boussard and
Catherine M. Curtin and
Doug Morrision and
Swati Yanamadala and
Katherine McDonald},
title = {Impact of Electronic Health Records on Quality of Care: Evidence on
Inpatient Mortality, Readmissions, and Complications},
booktitle = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2015},
publisher = {{AMIA}},
year = {2015},
url = {https://knowledge.amia.org/59310-amia-1.2741865/t001-1.2745946/f001-1.2745947/2246541-1.2746143/2235387-1.2746140},
timestamp = {Wed, 17 Apr 2024 11:47:40 +0200},
biburl = {https://dblp.org/rec/conf/amia/Hernandez-Boussard15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Hernandez-BoussardCHGOGGLTWWZAK08,
author = {Tina Hernandez{-}Boussard and
Michelle Whirl Carrillo and
Joan M. Hebert and
Li Gong and
Ryan Owen and
Mei Gong and
Winston Gor and
Feng Liu and
Chuong Truong and
Ryan Whaley and
Mark Woon and
Tina Zhou and
Russ B. Altman and
Teri E. Klein},
title = {The pharmacogenetics and pharmacogenomics knowledge base: accentuating
the knowledge},
journal = {Nucleic Acids Res.},
volume = {36},
number = {Database-Issue},
pages = {913--918},
year = {2008},
url = {https://doi.org/10.1093/nar/gkm1009},
doi = {10.1093/NAR/GKM1009},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Hernandez-BoussardCHGOGGLTWWZAK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DemeterBGHJMMNWZBSB07,
author = {Janos Demeter and
Catherine Beauheim and
Jeremy Gollub and
Tina Hernandez{-}Boussard and
Heng Jin and
Donald Maier and
John C. Matese and
Michael Nitzberg and
Farrell Wymore and
Zachariah K. Zachariah and
Patrick O. Brown and
Gavin Sherlock and
Catherine A. Ball},
title = {The Stanford Microarray Database: implementation of new analysis tools
and open source release of software},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {766--770},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl1019},
doi = {10.1093/NAR/GKL1019},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DemeterBGHJMMNWZBSB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BallADGHHJMNWZBS05,
author = {Catherine A. Ball and
Ihab A. B. Awad and
Janos Demeter and
Jeremy Gollub and
Joan M. Hebert and
Tina Hernandez{-}Boussard and
Heng Jin and
John C. Matese and
Michael Nitzberg and
Farrell Wymore and
Zachariah K. Zachariah and
Patrick O. Brown and
Gavin Sherlock},
title = {The Stanford Microarray Database accommodates additional microarray
platforms and data formats},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Database-Issue},
pages = {580--582},
year = {2005},
url = {https://doi.org/10.1093/nar/gki006},
doi = {10.1093/NAR/GKI006},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BallADGHHJMNWZBS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AwadRHBS04,
author = {Ihab A. B. Awad and
Christian A. Rees and
Tina Hernandez{-}Boussard and
Catherine A. Ball and
Gavin Sherlock},
title = {Caryoscope: An Open Source Java application for viewing microarray
data in a genomic context},
journal = {{BMC} Bioinform.},
volume = {5},
pages = {151},
year = {2004},
url = {https://doi.org/10.1186/1471-2105-5-151},
doi = {10.1186/1471-2105-5-151},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AwadRHBS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GollubBBDFHHJKMSBBS03,
author = {Jeremy Gollub and
Catherine A. Ball and
Gail Binkley and
Janos Demeter and
David B. Finkelstein and
Joan M. Hebert and
Tina Hernandez{-}Boussard and
Heng Jin and
Miroslava Kaloper and
John C. Matese and
Mark Schroeder and
Patrick O. Brown and
David Botstein and
Gavin Sherlock},
title = {The Stanford Microarray Database: data access and quality assessment
tools},
journal = {Nucleic Acids Res.},
volume = {31},
number = {1},
pages = {94--96},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg078},
doi = {10.1093/NAR/GKG078},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GollubBBDFHHJKMSBBS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DiehnSBJMHRCBBA03,
author = {Maximilian Diehn and
Gavin Sherlock and
Gail Binkley and
Heng Jin and
John C. Matese and
Tina Hernandez{-}Boussard and
Christian A. Rees and
J. Michael Cherry and
David Botstein and
Patrick O. Brown and
Ash A. Alizadeh},
title = {{SOURCE:} a unified genomic resource of functional annotations, ontologies,
and gene expression data},
journal = {Nucleic Acids Res.},
volume = {31},
number = {1},
pages = {219--223},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg014},
doi = {10.1093/NAR/GKG014},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DiehnSBJMHRCBBA03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SherlockHKBMDKWJBESBBC01,
author = {Gavin Sherlock and
Tina Hernandez{-}Boussard and
Andrew Kasarskis and
Gail Binkley and
John C. Matese and
Selina S. Dwight and
Miroslava Kaloper and
Shuai Weng and
Heng Jin and
Catherine A. Ball and
Michael B. Eisen and
Paul T. Spellman and
Patrick O. Brown and
David Botstein and
J. Michael Cherry},
title = {The Stanford Microarray Database},
journal = {Nucleic Acids Res.},
volume = {29},
number = {1},
pages = {152--155},
year = {2001},
url = {https://doi.org/10.1093/nar/29.1.152},
doi = {10.1093/NAR/29.1.152},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SherlockHKBMDKWJBESBBC01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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