BibTeX records: C. Anthony Hunt

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@article{DBLP:journals/ploscb/SmithRMKDKJH20,
  author       = {Andrew K. Smith and
                  Glen E. P. Ropella and
                  Mitchell R. McGill and
                  Preethi Krishnan and
                  Lopamudra Dutta and
                  Ryan C. Kennedy and
                  Hartmut Jaeschke and
                  C. Anthony Hunt},
  title        = {Contrasting model mechanisms of alanine aminotransferase {(ALT)} release
                  from damaged and necrotic hepatocytes as an example of general biomarker
                  mechanisms},
  journal      = {PLoS Comput. Biol.},
  volume       = {16},
  number       = {6},
  year         = {2020},
  url          = {https://doi.org/10.1371/journal.pcbi.1007622},
  doi          = {10.1371/JOURNAL.PCBI.1007622},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/SmithRMKDKJH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/MulugetaDEHHKMV18,
  author       = {Lealem Mulugeta and
                  Andrew Drach and
                  Ahmet Erdemir and
                  C. Anthony Hunt and
                  Marc Horner and
                  Joy P. Ku and
                  Jerry G. Myers Jr. and
                  Rajanikanth Vadigepalli and
                  William W. Lytton},
  title        = {Credibility, Replicability, and Reproducibility in Simulation for
                  Biomedicine and Clinical Applications in Neuroscience},
  journal      = {Frontiers Neuroinformatics},
  volume       = {12},
  pages        = {18},
  year         = {2018},
  url          = {https://doi.org/10.3389/fninf.2018.00018},
  doi          = {10.3389/FNINF.2018.00018},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/fini/MulugetaDEHHKMV18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/KennedyMMH18,
  author       = {Ryan C. Kennedy and
                  Meir Marmor and
                  Ralph Marcucio and
                  C. Anthony Hunt},
  title        = {Simulation enabled search for explanatory mechanisms of the fracture
                  healing process},
  journal      = {PLoS Comput. Biol.},
  volume       = {14},
  number       = {2},
  year         = {2018},
  url          = {https://doi.org/10.1371/journal.pcbi.1005980},
  doi          = {10.1371/JOURNAL.PCBI.1005980},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/KennedyMMH18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/SmithPRKKOH16,
  author       = {Andrew K. Smith and
                  Brenden K. Petersen and
                  Glen E. P. Ropella and
                  Ryan C. Kennedy and
                  Neil Kaplowitz and
                  Murad Ookhtens and
                  C. Anthony Hunt},
  title        = {Competing Mechanistic Hypotheses of Acetaminophen-Induced Hepatotoxicity
                  Challenged by Virtual Experiments},
  journal      = {PLoS Comput. Biol.},
  volume       = {12},
  number       = {12},
  year         = {2016},
  url          = {https://doi.org/10.1371/journal.pcbi.1005253},
  doi          = {10.1371/JOURNAL.PCBI.1005253},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/SmithPRKKOH16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/RopellaH16,
  author       = {Glen E. P. Ropella and
                  C. Anthony Hunt},
  editor       = {Levent Yilmaz and
                  Tuncer I. {\"{O}}ren and
                  Gregory R. Madey and
                  Maarten Sierhuis and
                  Yu Zhang},
  title        = {Measuring analog granularity},
  booktitle    = {Proceedings of the Agent-Directed Simulation Symposium, part of the
                  2016 Spring Simulation Multiconference, SpringSim '16, Pasadena, CA,
                  USA, April 3-6, 2016},
  pages        = {6},
  publisher    = {{SCS/ACM}},
  year         = {2016},
  url          = {http://dl.acm.org/citation.cfm?id=2972199},
  timestamp    = {Mon, 12 Dec 2016 09:26:05 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/RopellaH16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/SmithRHKO16,
  author       = {Andrew K. Smith and
                  Glen E. P. Ropella and
                  C. Anthony Hunt and
                  Neil Kaplowitz and
                  Murad Ookhtens},
  editor       = {Levent Yilmaz and
                  Tuncer I. {\"{O}}ren and
                  Gregory R. Madey and
                  Maarten Sierhuis and
                  Yu Zhang},
  title        = {Virtual experiments help explain intra- and inter-strain variability
                  of AILI-induced hepatic necrosis in mice},
  booktitle    = {Proceedings of the Agent-Directed Simulation Symposium, part of the
                  2016 Spring Simulation Multiconference, SpringSim '16, Pasadena, CA,
                  USA, April 3-6, 2016},
  pages        = {7},
  publisher    = {{SCS/ACM}},
  year         = {2016},
  url          = {http://dl.acm.org/citation.cfm?id=2972200},
  timestamp    = {Mon, 12 Dec 2016 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/SmithRHKO16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/PetersenH16,
  author       = {Brenden K. Petersen and
                  C. Anthony Hunt},
  editor       = {Levent Yilmaz and
                  Tuncer I. {\"{O}}ren and
                  Gregory R. Madey and
                  Maarten Sierhuis and
                  Yu Zhang},
  title        = {Developing a vision for executing scientifically useful virtual biomedical
                  experiments},
  booktitle    = {Proceedings of the Agent-Directed Simulation Symposium, part of the
                  2016 Spring Simulation Multiconference, SpringSim '16, Pasadena, CA,
                  USA, April 3-6, 2016},
  pages        = {8},
  publisher    = {{SCS/ACM}},
  year         = {2016},
  url          = {http://dl.acm.org/citation.cfm?id=2972201},
  timestamp    = {Mon, 12 Dec 2016 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/PetersenH16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/KennedyRH16,
  author       = {Ryan C. Kennedy and
                  Glen E. P. Ropella and
                  C. Anthony Hunt},
  editor       = {Levent Yilmaz and
                  Tuncer I. {\"{O}}ren and
                  Gregory R. Madey and
                  Maarten Sierhuis and
                  Yu Zhang},
  title        = {Implementing a cell-centered, agent-based framework with flexible
                  environment granularities using {MASON} and {VTK}},
  booktitle    = {Proceedings of the Agent-Directed Simulation Symposium, part of the
                  2016 Spring Simulation Multiconference, SpringSim '16, Pasadena, CA,
                  USA, April 3-6, 2016},
  pages        = {9},
  publisher    = {{SCS/ACM}},
  year         = {2016},
  url          = {http://dl.acm.org/citation.cfm?id=2972202},
  timestamp    = {Mon, 12 Dec 2016 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/KennedyRH16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/PetersenRH14,
  author       = {Brenden K. Petersen and
                  Glen E. P. Ropella and
                  C. Anthony Hunt},
  title        = {Toward modular biological models: defining analog modules based on
                  referent physiological mechanisms},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  pages        = {95},
  year         = {2014},
  url          = {https://doi.org/10.1186/s12918-014-0095-1},
  doi          = {10.1186/S12918-014-0095-1},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/PetersenRH14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/summersim/SmithRKOH14,
  author       = {Andrew K. Smith and
                  Glen E. P. Ropella and
                  Neil Kaplowitz and
                  Murad Ookhtens and
                  C. Anthony Hunt},
  title        = {Mechanistic agent-based damage and repair models as hypotheses for
                  patterns of necrosis caused by drug induced liver injury},
  booktitle    = {Proceedings of the 2014 Summer Simulation Multiconference, SummerSim
                  2014, Monterey, CA, USA, July 6-10, 2014},
  pages        = {16},
  publisher    = {{SCS/} {ACM}},
  year         = {2014},
  url          = {http://dl.acm.org/citation.cfm?id=2685633},
  timestamp    = {Wed, 12 Nov 2014 12:24:56 +0100},
  biburl       = {https://dblp.org/rec/conf/summersim/SmithRKOH14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijats/RopellaKH12,
  author       = {Glen E. P. Ropella and
                  Ryan C. Kennedy and
                  C. Anthony Hunt},
  title        = {Falsifying an Enzyme Induction Mechanism within a Validated, Multiscale
                  Liver Model},
  journal      = {Int. J. Agent Technol. Syst.},
  volume       = {4},
  number       = {3},
  pages        = {1--14},
  year         = {2012},
  url          = {https://doi.org/10.4018/jats.2012070101},
  doi          = {10.4018/JATS.2012070101},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijats/RopellaKH12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/RopellaH12,
  author       = {Glen E. P. Ropella and
                  C. Anthony Hunt},
  editor       = {Levent Yilmaz and
                  Tuncer I. {\"{O}}ren},
  title        = {Zonation of drug-induced, hepatic enzyme induction: falsifying fine
                  grained mechanisms within a validated, multiscale In Silico Liver},
  booktitle    = {2012 Spring Simulation Multiconference, SpringSim '12, Orlando, FL,
                  {USA} - March 26-29, 2012, Proceedings of the 2012 Symposium on Agent
                  Directed Simulation},
  pages        = {9},
  publisher    = {{SCS/ACM}},
  year         = {2012},
  url          = {http://dl.acm.org/citation.cfm?id=2338785},
  timestamp    = {Sat, 13 Oct 2012 14:40:28 +0200},
  biburl       = {https://dblp.org/rec/conf/springsim/RopellaH12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/EngelbergDMH11,
  author       = {Jesse Engelberg and
                  Anirban Datta and
                  Keith E. Mostov and
                  C. Anthony Hunt},
  title        = {{MDCK} Cystogenesis Driven by Cell Stabilization within Computational
                  Analogues},
  journal      = {PLoS Comput. Biol.},
  volume       = {7},
  number       = {4},
  year         = {2011},
  url          = {https://doi.org/10.1371/journal.pcbi.1002030},
  doi          = {10.1371/JOURNAL.PCBI.1002030},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/EngelbergDMH11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/KimH11,
  author       = {Sean H. J. Kim and
                  C. Anthony Hunt},
  editor       = {Levent Yilmaz and
                  Tuncer I. {\"{O}}ren},
  title        = {Composite cell agent model of epithelial culture in vitro},
  booktitle    = {2011 Spring Simulation Multi-conference, SpringSim '11, Boston, MA,
                  USA, April 03-07, 2011. Volume 1: Proceedings of the 2011 Workshop
                  on Agent-Directed Simulation {(ADS)}},
  pages        = {45--51},
  publisher    = {{SCS/ACM}},
  year         = {2011},
  url          = {http://dl.acm.org/citation.cfm?id=2048361},
  timestamp    = {Thu, 01 Dec 2011 15:40:11 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/KimH11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/EngelbergDMH11,
  author       = {Jesse Engelberg and
                  Anirban Datta and
                  Keith E. Mostov and
                  C. Anthony Hunt},
  editor       = {Levent Yilmaz and
                  Tuncer I. {\"{O}}ren},
  title        = {A robust in silico analogue of {MDCK} cystogenesis mimics growth in
                  multiple culture conditions},
  booktitle    = {2011 Spring Simulation Multi-conference, SpringSim '11, Boston, MA,
                  USA, April 03-07, 2011. Volume 1: Proceedings of the 2011 Workshop
                  on Agent-Directed Simulation {(ADS)}},
  pages        = {52--56},
  publisher    = {{SCS/ACM}},
  year         = {2011},
  url          = {http://dl.acm.org/citation.cfm?id=2048362},
  timestamp    = {Thu, 01 Dec 2011 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/EngelbergDMH11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/RopellaH10,
  author       = {Glen E. P. Ropella and
                  C. Anthony Hunt},
  title        = {Cloud computing and validation of expandable in silico livers},
  journal      = {{BMC} Syst. Biol.},
  volume       = {4},
  pages        = {168},
  year         = {2010},
  url          = {https://doi.org/10.1186/1752-0509-4-168},
  doi          = {10.1186/1752-0509-4-168},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/RopellaH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijats/KimPRH10,
  author       = {Sean H. J. Kim and
                  Sunwoo Park and
                  Glen E. P. Ropella and
                  C. Anthony Hunt},
  title        = {Agent-Directed Tracing of Multi-Scale Drug Disposition Events within
                  Normal and Diseased In Silico Livers},
  journal      = {Int. J. Agent Technol. Syst.},
  volume       = {2},
  number       = {3},
  pages        = {1--19},
  year         = {2010},
  url          = {https://doi.org/10.4018/jats.2010070101},
  doi          = {10.4018/JATS.2010070101},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijats/KimPRH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/TangH10,
  author       = {Jonathan Tang and
                  C. Anthony Hunt},
  title        = {Identifying the Rules of Engagement Enabling Leukocyte Rolling, Activation,
                  and Adhesion},
  journal      = {PLoS Comput. Biol.},
  volume       = {6},
  number       = {2},
  year         = {2010},
  url          = {https://doi.org/10.1371/journal.pcbi.1000681},
  doi          = {10.1371/JOURNAL.PCBI.1000681},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/TangH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sede/Sheikh-BahaeiABH10,
  author       = {Shahab Sheikh{-}Bahaei and
                  Kamran A. Ali and
                  Sabina R. Bera and
                  C. Anthony Hunt},
  editor       = {Imad Rahal and
                  Rym Zalila{-}Wenkstern},
  title        = {Predicting Human Hepatic Clearance Using Hypernet Neural Networks},
  booktitle    = {{ISCA} 19th International Conference on Software Engineeringand Data
                  Engineering {(SEDE-2010)} June 16-18, 2010, Hilton Fisherman's Wharf,
                  San Francisco, CA, {USA}},
  pages        = {355--359},
  publisher    = {{ISCA}},
  year         = {2010},
  timestamp    = {Fri, 28 Jan 2011 07:43:08 +0100},
  biburl       = {https://dblp.org/rec/conf/sede/Sheikh-BahaeiABH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sede/GaetanoBMMH10,
  author       = {Laura Gaetano and
                  Giacomo Di Benedetto and
                  Umberto Morbiducci and
                  Franco M. Montevecchi and
                  C. Anthony Hunt},
  editor       = {Imad Rahal and
                  Rym Zalila{-}Wenkstern},
  title        = {An Agent-based System Model to Support Cardiac Tissue Engineering:
                  Preliminary Results},
  booktitle    = {{ISCA} 19th International Conference on Software Engineeringand Data
                  Engineering {(SEDE-2010)} June 16-18, 2010, Hilton Fisherman's Wharf,
                  San Francisco, CA, {USA}},
  pages        = {370--374},
  publisher    = {{ISCA}},
  year         = {2010},
  timestamp    = {Mon, 21 Feb 2011 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/sede/GaetanoBMMH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/KimPRH10,
  author       = {Sean H. J. Kim and
                  Sunwoo Park and
                  Glen E. P. Ropella and
                  C. Anthony Hunt},
  editor       = {Robert M. McGraw and
                  Eric S. Imsand and
                  Michael J. Chinni},
  title        = {Agent-based simulation of drug disposition in cirrhotic liver},
  booktitle    = {Proceedings of the 2010 Spring Simulation Multiconference, SpringSim
                  2010, Orlando, Florida, USA, April 11-15, 2010},
  pages        = {12},
  publisher    = {{SCS/ACM}},
  year         = {2010},
  url          = {https://doi.org/10.1145/1878537.1878550},
  doi          = {10.1145/1878537.1878550},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/springsim/KimPRH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wsc/Sheikh-BahaeiH10,
  author       = {Shahab Sheikh{-}Bahaei and
                  C. Anthony Hunt},
  title        = {Simulating plausible mechanisms for changing hepatic xenobiotic clearance
                  patterns},
  booktitle    = {Proceedings of the 2010 Winter Simulation Conference, {WSC} 2010,
                  Baltimore, Maryland, USA, 5-8 December 2010},
  pages        = {595--607},
  publisher    = {{IEEE}},
  year         = {2010},
  url          = {https://doi.org/10.1109/WSC.2010.5679128},
  doi          = {10.1109/WSC.2010.5679128},
  timestamp    = {Thu, 10 Jun 2021 22:20:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wsc/Sheikh-BahaeiH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/KimDMPH09,
  author       = {Sean H. J. Kim and
                  Jayanta Debnath and
                  Keith E. Mostov and
                  Sunwoo Park and
                  C. Anthony Hunt},
  title        = {A computational approach to resolve cell level contributions to early
                  glandular epithelial cancer progression},
  journal      = {{BMC} Syst. Biol.},
  volume       = {3},
  pages        = {122},
  year         = {2009},
  url          = {https://doi.org/10.1186/1752-0509-3-122},
  doi          = {10.1186/1752-0509-3-122},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/KimDMPH09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/complexity/RopellaPH09,
  author       = {Glen E. P. Ropella and
                  Sunwoo Park and
                  C. Anthony Hunt},
  title        = {Evaluating an hepatic enzyme induction mechanism through coarse- and
                  fine-grained measurements of an in silico liver},
  journal      = {Complex.},
  volume       = {14},
  number       = {6},
  pages        = {28--34},
  year         = {2009},
  url          = {https://doi.org/10.1002/cplx.20253},
  doi          = {10.1002/CPLX.20253},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/complexity/RopellaPH09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caine/TangH09,
  author       = {Jonathan Tang and
                  C. Anthony Hunt},
  editor       = {Dunren Che},
  title        = {In Silico White Blood Cell: {A} Synthetic Model of Leukocyte Rolling,
                  Activation, and Adhesion During Inflammation},
  booktitle    = {Proceedings of the {ISCA} 22nd International Conference on Computer
                  Applications in Industry and Engineering, {CAINE} 2009, November 4-6,
                  2009, Hilton San Francisco Fisherman's Wharf, San Francisco, California,
                  {USA}},
  pages        = {225--230},
  publisher    = {{ISCA}},
  year         = {2009},
  timestamp    = {Mon, 08 Mar 2010 17:18:33 +0100},
  biburl       = {https://dblp.org/rec/conf/caine/TangH09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/KimSH09,
  author       = {Sean H. J. Kim and
                  Shahab Sheikh{-}Bahaei and
                  C. Anthony Hunt},
  editor       = {Gabriel A. Wainer and
                  Clifford A. Shaffer and
                  Robert M. McGraw and
                  Michael J. Chinni},
  title        = {Agent-based modeling of alveolar type {II} cyst formation in vitro},
  booktitle    = {Proceedings of the 2009 Spring Simulation Multiconference, SpringSim
                  2009, San Diego, California, USA, March 22-27, 2009},
  publisher    = {{SCS/ACM}},
  year         = {2009},
  url          = {http://dl.acm.org/citation.cfm?id=1639809.1639821},
  timestamp    = {Mon, 10 Dec 2012 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/KimSH09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/LamRH09,
  author       = {Tai Ning Lam and
                  Glen E. P. Ropella and
                  C. Anthony Hunt},
  editor       = {Gabriel A. Wainer and
                  Clifford A. Shaffer and
                  Robert M. McGraw and
                  Michael J. Chinni},
  title        = {Focus on discovering mechanisms: a relativistic, agent-directed, perfused
                  liver},
  booktitle    = {Proceedings of the 2009 Spring Simulation Multiconference, SpringSim
                  2009, San Diego, California, USA, March 22-27, 2009},
  publisher    = {{SCS/ACM}},
  year         = {2009},
  url          = {http://dl.acm.org/citation.cfm?id=1639809.1639834},
  timestamp    = {Mon, 10 Dec 2012 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/LamRH09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/Sheikh-BahaeiKH09,
  author       = {Shahab Sheikh{-}Bahaei and
                  Sean H. J. Kim and
                  C. Anthony Hunt},
  editor       = {Gabriel A. Wainer and
                  Clifford A. Shaffer and
                  Robert M. McGraw and
                  Michael J. Chinni},
  title        = {Multi-agent based modeling of liver detoxification},
  booktitle    = {Proceedings of the 2009 Spring Simulation Multiconference, SpringSim
                  2009, San Diego, California, USA, March 22-27, 2009},
  publisher    = {{SCS/ACM}},
  year         = {2009},
  url          = {http://dl.acm.org/citation.cfm?id=1639809.1639823},
  timestamp    = {Mon, 10 Dec 2012 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/Sheikh-BahaeiKH09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/EngelbergRH08,
  author       = {Jesse Engelberg and
                  Glen E. P. Ropella and
                  C. Anthony Hunt},
  title        = {Essential operating principles for tumor spheroid growth},
  journal      = {{BMC} Syst. Biol.},
  volume       = {2},
  pages        = {110},
  year         = {2008},
  url          = {https://doi.org/10.1186/1752-0509-2-110},
  doi          = {10.1186/1752-0509-2-110},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/EngelbergRH08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/YanPSRH08,
  author       = {Li Yan and
                  Sunwoo Park and
                  Shahab Sheikh{-}Bahaei and
                  Glen E. P. Ropella and
                  C. Anthony Hunt},
  editor       = {Hassan Rajaei and
                  Gabriel A. Wainer and
                  Michael J. Chinni},
  title        = {Predicting hepatic disposition properties of cationic drugs using
                  a physiologically based, agent-oriented In Silico Liver},
  booktitle    = {Proceedings of the 2008 Spring Simulation Multiconference, SpringSim
                  2008, Ottawa, Canada, April 14-17, 2008},
  pages        = {162--169},
  publisher    = {{SCS/ACM}},
  year         = {2008},
  url          = {http://dl.acm.org/citation.cfm?id=1400549.1400569},
  timestamp    = {Mon, 10 Dec 2012 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/YanPSRH08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/springsim/TangH08,
  author       = {Jonathan Tang and
                  C. Anthony Hunt},
  editor       = {Hassan Rajaei and
                  Gabriel A. Wainer and
                  Michael J. Chinni},
  title        = {In silico white blood cell: mechanisms underlying leukocyte rolling
                  and adhesion during inflammation},
  booktitle    = {Proceedings of the 2008 Spring Simulation Multiconference, SpringSim
                  2008, Ottawa, Canada, April 14-17, 2008},
  pages        = {170--176},
  publisher    = {{SCS/ACM}},
  year         = {2008},
  url          = {http://dl.acm.org/citation.cfm?id=1400549.1400570},
  timestamp    = {Mon, 10 Dec 2012 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/springsim/TangH08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/TangLH07,
  author       = {Jonathan Tang and
                  Klaus Ley and
                  C. Anthony Hunt},
  title        = {Dynamics of in silico leukocyte rolling, activation, and adhesion},
  journal      = {{BMC} Syst. Biol.},
  volume       = {1},
  pages        = {14},
  year         = {2007},
  url          = {https://doi.org/10.1186/1752-0509-1-14},
  doi          = {10.1186/1752-0509-1-14},
  timestamp    = {Sat, 05 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/TangLH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caine/Sheikh-BahaeiH07,
  author       = {Shahab Sheikh{-}Bahaei and
                  C. Anthony Hunt},
  editor       = {Gongzhu Hu},
  title        = {Parameter Estimation via Analysis of Fuzzy Clusters {(PEAF):} An Algorithm
                  to Estimate Parameters of Agent-Based Models},
  booktitle    = {Proceedings of the {ISCA} 20th International Conference on Computer
                  Applications in Industry and Engineering, {CAINE} 2007, November 7-9,
                  2007, San Francisco, California, {USA}},
  pages        = {23--27},
  publisher    = {{ISCA}},
  year         = {2007},
  timestamp    = {Tue, 29 Jan 2008 07:45:48 +0100},
  biburl       = {https://dblp.org/rec/conf/caine/Sheikh-BahaeiH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caine/EngelbergRH07,
  author       = {Jesse Engelberg and
                  Glen E. P. Ropella and
                  C. Anthony Hunt},
  editor       = {Gongzhu Hu},
  title        = {Affects of Surface Detection on Shape and Growth of Model Tumor Spheroids},
  booktitle    = {Proceedings of the {ISCA} 20th International Conference on Computer
                  Applications in Industry and Engineering, {CAINE} 2007, November 7-9,
                  2007, San Francisco, California, {USA}},
  pages        = {53--56},
  publisher    = {{ISCA}},
  year         = {2007},
  timestamp    = {Tue, 29 Jan 2008 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/caine/EngelbergRH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caine/KimPYMMH07,
  author       = {Sean H. J. Kim and
                  Sunwoo Park and
                  Wei Yu and
                  Keith E. Mostov and
                  Michael A. Matthay and
                  C. Anthony Hunt},
  editor       = {Gongzhu Hu},
  title        = {Systems Modeling of Alveolar Morphogenesis In Vitro},
  booktitle    = {Proceedings of the {ISCA} 20th International Conference on Computer
                  Applications in Industry and Engineering, {CAINE} 2007, November 7-9,
                  2007, San Francisco, California, {USA}},
  pages        = {141--144},
  publisher    = {{ISCA}},
  year         = {2007},
  timestamp    = {Tue, 29 Jan 2008 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/caine/KimPYMMH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caine/ParkKH07,
  author       = {Sunwoo Park and
                  Sean H. J. Kim and
                  C. Anthony Hunt},
  editor       = {Gongzhu Hu},
  title        = {Simulation Processors and Their Collaboration for {DEVS} Models Integrated
                  with Universal Coupling Specification},
  booktitle    = {Proceedings of the {ISCA} 20th International Conference on Computer
                  Applications in Industry and Engineering, {CAINE} 2007, November 7-9,
                  2007, San Francisco, California, {USA}},
  pages        = {151--155},
  publisher    = {{ISCA}},
  year         = {2007},
  timestamp    = {Tue, 29 Jan 2008 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/caine/ParkKH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caine/ParkKRH07,
  author       = {Sunwoo Park and
                  Sean H. J. Kim and
                  Glen E. P. Ropella and
                  C. Anthony Hunt},
  editor       = {Gongzhu Hu},
  title        = {Tracking Compounds and Their Interactions within In Silico Liver},
  booktitle    = {Proceedings of the {ISCA} 20th International Conference on Computer
                  Applications in Industry and Engineering, {CAINE} 2007, November 7-9,
                  2007, San Francisco, California, {USA}},
  pages        = {257--262},
  publisher    = {{ISCA}},
  year         = {2007},
  timestamp    = {Tue, 29 Jan 2008 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/caine/ParkKRH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/GrantMTH06,
  author       = {Mark R. Grant and
                  Keith E. Mostov and
                  Thea D. Tlsty and
                  C. Anthony Hunt},
  title        = {Simulating Properties of In Vitro Epithelial Cell Morphogenesis},
  journal      = {PLoS Comput. Biol.},
  volume       = {2},
  number       = {10},
  year         = {2006},
  url          = {https://doi.org/10.1371/journal.pcbi.0020129},
  doi          = {10.1371/JOURNAL.PCBI.0020129},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/GrantMTH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/simulation/ParkHZ06,
  author       = {Sunwoo Park and
                  C. Anthony Hunt and
                  Bernard P. Zeigler},
  title        = {Cost-based Partitioning for Distributed and Parallel Simulation of
                  Decomposable Multiscale Constructive Models},
  journal      = {Simul.},
  volume       = {82},
  number       = {12},
  pages        = {809--826},
  year         = {2006},
  url          = {https://doi.org/10.1177/0037549706075479},
  doi          = {10.1177/0037549706075479},
  timestamp    = {Sat, 05 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/simulation/ParkHZ06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/GrantH06,
  author       = {Mark R. Grant and
                  C. Anthony Hunt},
  editor       = {Corrado Priami},
  title        = {An In Silico Analogue of In Vitro Systems Used to Study Epithelial
                  Cell Morphogenesis},
  booktitle    = {Computational Methods in Systems Biology, International Conference,
                  {CMSB} 2006, Trento, Italy, October 18-19, 2006, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4210},
  pages        = {285--297},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11885191\_20},
  doi          = {10.1007/11885191\_20},
  timestamp    = {Sat, 05 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cmsb/GrantH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wsc/Sheikh-BahaeiH06,
  author       = {Shahab Sheikh{-}Bahaei and
                  C. Anthony Hunt},
  editor       = {L. Felipe Perrone and
                  Barry Lawson and
                  Jason Liu and
                  Frederick P. Wieland},
  title        = {Prediction of \emph{in vitro} hepatic biliary excretion using stochastic
                  agent-based modeling and fuzzy clustering},
  booktitle    = {Proceedings of the Winter Simulation Conference {WSC} 2006, Monterey,
                  California, USA, December 3-6, 2006},
  pages        = {1617--1624},
  publisher    = {{IEEE} Computer Society},
  year         = {2006},
  url          = {https://doi.org/10.1109/WSC.2006.322935},
  doi          = {10.1109/WSC.2006.322935},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/wsc/Sheikh-BahaeiH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wsc/KimGPH06,
  author       = {Sean H. J. Kim and
                  Mark R. Grant and
                  Sunwoo Park and
                  C. Anthony Hunt},
  editor       = {L. Felipe Perrone and
                  Barry Lawson and
                  Jason Liu and
                  Frederick P. Wieland},
  title        = {In silico analogues of epithelial cell growth and morphogenesis},
  booktitle    = {Proceedings of the Winter Simulation Conference {WSC} 2006, Monterey,
                  California, USA, December 3-6, 2006},
  pages        = {2301},
  publisher    = {{IEEE} Computer Society},
  year         = {2006},
  url          = {https://doi.org/10.1109/WSC.2006.323092},
  doi          = {10.1109/WSC.2006.323092},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/wsc/KimGPH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/HuntRRY04,
  author       = {C. Anthony Hunt and
                  Glen E. P. Ropella and
                  Michael S. Roberts and
                  Li Yan},
  editor       = {Vincent Danos and
                  Vincent Sch{\"{a}}chter},
  title        = {Biomimetic in Silico Devices},
  booktitle    = {Computational Methods in Systems Biology, International Conference,
                  {CMSB} 2004, Paris, France, May 26-28, 2004, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {3082},
  pages        = {34--42},
  publisher    = {Springer},
  year         = {2004},
  url          = {https://doi.org/10.1007/978-3-540-25974-9\_4},
  doi          = {10.1007/978-3-540-25974-9\_4},
  timestamp    = {Sat, 05 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cmsb/HuntRRY04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cata/ShawH01,
  author       = {Sandy Shaw and
                  C. Anthony Hunt},
  editor       = {C. C. Hung},
  title        = {A novel method for visualizing similarity in gene expression and other
                  large datasets},
  booktitle    = {Proceedings of the {ISCA} 16th International Conference Computers
                  and Their Applications, March 28-30, 2001, Seattle, Washington, {USA}},
  pages        = {338--341},
  publisher    = {{ISCA}},
  year         = {2001},
  timestamp    = {Mon, 09 Aug 2021 16:27:33 +0200},
  biburl       = {https://dblp.org/rec/conf/cata/ShawH01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cata/QutubLH01,
  author       = {Amina Qutub and
                  Alex Lancaster and
                  C. Anthony Hunt},
  editor       = {C. C. Hung},
  title        = {Therapeutic engineering: Models of individual variability in drug
                  systems},
  booktitle    = {Proceedings of the {ISCA} 16th International Conference Computers
                  and Their Applications, March 28-30, 2001, Seattle, Washington, {USA}},
  pages        = {346--349},
  publisher    = {{ISCA}},
  year         = {2001},
  timestamp    = {Mon, 09 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cata/QutubLH01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cata/Hunt99,
  author       = {C. Anthony Hunt},
  editor       = {Roger Y. Lee},
  title        = {Simulating clinical trials. {A} methodology for validating pharmacodynamic
                  predictions},
  booktitle    = {Computers and Their Applications (CATA-99), Proceedings of the {ISCA}
                  14th International Conference, Cancun, Mexico, April 7-9, 1999},
  pages        = {222--224},
  publisher    = {{ISCA}},
  year         = {1999},
  timestamp    = {Mon, 09 Aug 2021 16:27:23 +0200},
  biburl       = {https://dblp.org/rec/conf/cata/Hunt99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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