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ORCIDBibTeX records: Marco Masseroli
@article{DBLP:journals/bmcbi/CascianelliCMM23,
author = {Silvia Cascianelli and
Gaia Ceddia and
Alberto Marchesi and
Marco Masseroli},
title = {Identification of transcription factor high accumulation {DNA} zones},
journal = {{BMC} Bioinform.},
volume = {24},
number = {1},
pages = {395},
year = {2023},
url = {https://doi.org/10.1186/s12859-023-05528-1},
doi = {10.1186/S12859-023-05528-1},
timestamp = {Mon, 30 Oct 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CascianelliCMM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/CascianelliGM23,
author = {Silvia Cascianelli and
Arianna Galzerano and
Marco Masseroli},
title = {Supervised Relevance-Redundancy assessments for feature selection
in omics-based classification scenarios},
journal = {J. Biomed. Informatics},
volume = {144},
pages = {104457},
year = {2023},
url = {https://doi.org/10.1016/j.jbi.2023.104457},
doi = {10.1016/J.JBI.2023.104457},
timestamp = {Thu, 14 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/CascianelliGM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeoneGMP22,
author = {Michele Leone and
Eugenia Galeota and
Marco Masseroli and
Mattia Pelizzola},
title = {Identification, semantic annotation and comparison of combinations
of functional elements in multiple biological conditions},
journal = {Bioinform.},
volume = {38},
number = {5},
pages = {1183--1190},
year = {2022},
url = {https://doi.org/10.1093/bioinformatics/btab815},
doi = {10.1093/BIOINFORMATICS/BTAB815},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeoneGMP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PallottaCM22,
author = {Simone Pallotta and
Silvia Cascianelli and
Marco Masseroli},
title = {{RGMQL:} scalable and interoperable computing of heterogeneous omics
big data and metadata in R/Bioconductor},
journal = {{BMC} Bioinform.},
volume = {23},
number = {1},
pages = {123},
year = {2022},
url = {https://doi.org/10.1186/s12859-022-04648-4},
doi = {10.1186/S12859-022-04648-4},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PallottaCM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FrascaMLMM22,
author = {Fabrizio Frasca and
Matteo Matteucci and
Michele Leone and
Marco J. Morelli and
Marco Masseroli},
title = {Accurate and highly interpretable prediction of gene expression from
histone modifications},
journal = {{BMC} Bioinform.},
volume = {23},
number = {1},
pages = {151},
year = {2022},
url = {https://doi.org/10.1186/s12859-022-04687-x},
doi = {10.1186/S12859-022-04687-X},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FrascaMLMM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AlfonsiBCM22,
author = {Tommaso Alfonsi and
Anna Bernasconi and
Arif Canakoglu and
Marco Masseroli},
title = {Genomic data integration and user-defined sample-set extraction for
population variant analysis},
journal = {{BMC} Bioinform.},
volume = {23},
number = {1},
pages = {401},
year = {2022},
url = {https://doi.org/10.1186/s12859-022-04927-0},
doi = {10.1186/S12859-022-04927-0},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AlfonsiBCM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/CristovaoCCCNPM22,
author = {Francisco Cristovao and
Silvia Cascianelli and
Arif Canakoglu and
Mark J. Carman and
Luca Nanni and
Pietro Pinoli and
Marco Masseroli},
title = {Investigating Deep Learning Based Breast Cancer Subtyping Using Pan-Cancer
and Multi-Omic Data},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {19},
number = {1},
pages = {121--134},
year = {2022},
url = {https://doi.org/10.1109/TCBB.2020.3042309},
doi = {10.1109/TCBB.2020.3042309},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/CristovaoCCCNPM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BernasconiCMC22,
author = {Anna Bernasconi and
Arif Canakoglu and
Marco Masseroli and
Stefano Ceri},
title = {{META-BASE:} {A} Novel Architecture for Large-Scale Genomic Metadata
Integration},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {19},
number = {1},
pages = {543--557},
year = {2022},
url = {https://doi.org/10.1109/TCBB.2020.2998954},
doi = {10.1109/TCBB.2020.2998954},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/BernasconiCMC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/PinoliCCM22,
author = {Pietro Pinoli and
Gaia Ceddia and
Stefano Ceri and
Marco Masseroli},
title = {Predicting Drug Synergism by Means of Non-Negative Matrix Tri-Factorization},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {19},
number = {4},
pages = {1956--1967},
year = {2022},
url = {https://doi.org/10.1109/TCBB.2021.3091814},
doi = {10.1109/TCBB.2021.3091814},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/PinoliCCM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BernasconiCMC21,
author = {Anna Bernasconi and
Arif Canakoglu and
Marco Masseroli and
Stefano Ceri},
title = {The road towards data integration in human genomics: players, steps
and interactions},
journal = {Briefings Bioinform.},
volume = {22},
number = {1},
pages = {30--44},
year = {2021},
url = {https://doi.org/10.1093/bib/bbaa080},
doi = {10.1093/BIB/BBAA080},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/BernasconiCMC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BernasconiCMPC21,
author = {Anna Bernasconi and
Arif Canakoglu and
Marco Masseroli and
Pietro Pinoli and
Stefano Ceri},
title = {A review on viral data sources and search systems for perspective
mitigation of {COVID-19}},
journal = {Briefings Bioinform.},
volume = {22},
number = {2},
pages = {664--675},
year = {2021},
url = {https://doi.org/10.1093/bib/bbaa359},
doi = {10.1093/BIB/BBAA359},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/BernasconiCMPC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/CanakogluPGNMC21,
author = {Arif Canakoglu and
Pietro Pinoli and
Andrea Gulino and
Luca Nanni and
Marco Masseroli and
Stefano Ceri},
title = {Federated sharing and processing of genomic datasets for tertiary
data analysis},
journal = {Briefings Bioinform.},
volume = {22},
number = {3},
year = {2021},
url = {https://doi.org/10.1093/bib/bbaa091},
doi = {10.1093/BIB/BBAA091},
timestamp = {Thu, 17 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/CanakogluPGNMC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/MoroM21,
author = {Gianluca Moro and
Marco Masseroli},
title = {Gene function finding through cross-organism ensemble learning},
journal = {BioData Min.},
volume = {14},
number = {1},
pages = {14},
year = {2021},
url = {https://doi.org/10.1186/s13040-021-00239-w},
doi = {10.1186/S13040-021-00239-W},
timestamp = {Sun, 16 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodatamining/MoroM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RegondiFDGGMM21,
author = {Chiara Regondi and
Maddalena Fratelli and
Giovanna Damia and
Federica Guffanti and
Monica Ganzinelli and
Matteo Matteucci and
Marco Masseroli},
title = {Predictive modeling of gene expression regulation},
journal = {{BMC} Bioinform.},
volume = {22},
number = {1},
pages = {571},
year = {2021},
url = {https://doi.org/10.1186/s12859-021-04481-1},
doi = {10.1186/S12859-021-04481-1},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RegondiFDGGMM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmpb/VentrellaDFRM21,
author = {Piervincenzo Ventrella and
Giovanni Delgrossi and
Gianmichele Ferrario and
Marco Righetti and
Marco Masseroli},
title = {Supervised machine learning for the assessment of Chronic Kidney Disease
advancement},
journal = {Comput. Methods Programs Biomed.},
volume = {209},
pages = {106329},
year = {2021},
url = {https://doi.org/10.1016/j.cmpb.2021.106329},
doi = {10.1016/J.CMPB.2021.106329},
timestamp = {Tue, 05 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cmpb/VentrellaDFRM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CeddiaMPSCM20,
author = {Gaia Ceddia and
Liuba Nausicaa Martino and
Alice C. L. Parodi and
Piercesare Secchi and
Stefano Campaner and
Marco Masseroli},
title = {Association rule mining to identify transcription factor interactions
in genomic regions},
journal = {Bioinform.},
volume = {36},
number = {4},
pages = {1007--1013},
year = {2020},
url = {https://doi.org/10.1093/bioinformatics/btz687},
doi = {10.1093/BIOINFORMATICS/BTZ687},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CeddiaMPSCM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CeolMBCCPM20,
author = {Arnaud C{\'{e}}ol and
Piero Montanari and
Ilaria Bartolini and
Stefano Ceri and
Paolo Ciaccia and
Marco Patella and
Marco Masseroli},
title = {Search and comparison of (epi)genomic feature patterns in multiple
genome browser tracks},
journal = {{BMC} Bioinform.},
volume = {21},
number = {1},
pages = {464},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03781-2},
doi = {10.1186/S12859-020-03781-2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CeolMBCCPM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/CeddiaPCM20,
author = {Gaia Ceddia and
Pietro Pinoli and
Stefano Ceri and
Marco Masseroli},
title = {Matrix Factorization-based Technique for Drug Repurposing Predictions},
journal = {{IEEE} J. Biomed. Health Informatics},
volume = {24},
number = {11},
pages = {3162--3172},
year = {2020},
url = {https://doi.org/10.1109/JBHI.2020.2991763},
doi = {10.1109/JBHI.2020.2991763},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/titb/CeddiaPCM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/PerinoCM20,
author = {Lorenzo Perino and
Silvia Cascianelli and
Marco Masseroli},
title = {Hybrid Evolutionary Framework for Selection of Genes Predicting Breast
Cancer Relapse},
booktitle = {2020 International Joint Conference on Neural Networks, {IJCNN} 2020,
Glasgow, United Kingdom, July 19-24, 2020},
pages = {1--8},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/IJCNN48605.2020.9207226},
doi = {10.1109/IJCNN48605.2020.9207226},
timestamp = {Tue, 06 Oct 2020 15:44:04 +0200},
biburl = {https://dblp.org/rec/conf/ijcnn/PerinoCM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@misc{DBLP:data/10/CumboCBCCMW20,
author = {Fabio Cumbo and
Eleonora Cappelli and
Anna Bernasconi and
Arif Canakoglu and
Stefano Ceri and
Marco Masseroli and
Emanuel Weitschek},
title = {OpenGDC (Version 1.0.0)},
publisher = {Zenodo},
year = {2020},
month = aug,
howpublished = {\url{https://doi.org/10.5281/zenodo.4000250}},
note = {Accessed on YYYY-MM-DD.},
url = {https://doi.org/10.5281/zenodo.4000250},
doi = {10.5281/ZENODO.4000250},
timestamp = {Thu, 13 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/data/10/CumboCBCCMW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/CanakogluBCMC19,
author = {Arif Canakoglu and
Anna Bernasconi and
Andrea Colombo and
Marco Masseroli and
Stefano Ceri},
title = {GenoSurf: metadata driven semantic search system for integrated genomic
datasets},
journal = {Database J. Biol. Databases Curation},
volume = {2019},
pages = {baz132},
year = {2019},
url = {https://doi.org/10.1093/database/baz132},
doi = {10.1093/DATABASE/BAZ132},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/CanakogluBCMC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MasseroliCPKGHN19,
author = {Marco Masseroli and
Arif Canakoglu and
Pietro Pinoli and
Abdulrahman Kaitoua and
Andrea Gulino and
Olha Horlova and
Luca Nanni and
Anna Bernasconi and
Stefano Perna and
Eirini Stamoulakatou and
Stefano Ceri},
title = {Processing of big heterogeneous genomic datasets for tertiary analysis
of Next Generation Sequencing data},
journal = {Bioinform.},
volume = {35},
number = {5},
pages = {729--736},
year = {2019},
url = {https://doi.org/10.1093/bioinformatics/bty688},
doi = {10.1093/BIOINFORMATICS/BTY688},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MasseroliCPKGHN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DissezCPCM19,
author = {Ga{\"{e}}tan Dissez and
Gaia Ceddia and
Pietro Pinoli and
Stefano Ceri and
Marco Masseroli},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Drug Repositioning Predictions by Non-Negative Matrix Tri-Factorization
of Integrated Association Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {25--33},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342154},
doi = {10.1145/3307339.3342154},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DissezCPCM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Settino0CAM019,
author = {Marzia Settino and
Anna Bernasconi and
Gaia Ceddia and
Giuseppe Agapito and
Marco Masseroli and
Mario Cannataro},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Using GMQL-Web for Querying, Downloading and Integrating Public with
Private Genomic Datasets},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {688--693},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343466},
doi = {10.1145/3307339.3343466},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Settino0CAM019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/LeoneGM19,
author = {Michele Leone and
Marta Galvani and
Marco Masseroli},
title = {De Novo Sequence-Based Method for ncRPI Prediction using Structural
Information},
booktitle = {19th {IEEE} International Conference on Bioinformatics and Bioengineering,
{BIBE} 2019, Athens, Greece, October 28-30, 2019},
pages = {146--151},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/BIBE.2019.00034},
doi = {10.1109/BIBE.2019.00034},
timestamp = {Tue, 07 Jan 2020 17:11:16 +0100},
biburl = {https://dblp.org/rec/conf/bibe/LeoneGM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibb/CascianelliCCCN19,
author = {Silvia Cascianelli and
Francisco Cristovao and
Arif Canakoglu and
Mark J. Carman and
Luca Nanni and
Pietro Pinoli and
Marco Masseroli},
editor = {Paolo Cazzaniga and
Daniela Besozzi and
Ivan Merelli and
Luca Manzoni},
title = {Evaluating Deep Semi-supervised Learning for Whole-Transcriptome Breast
Cancer Subtyping},
booktitle = {Computational Intelligence Methods for Bioinformatics and Biostatistics
- 16th International Meeting, {CIBB} 2019, Bergamo, Italy, September
4-6, 2019, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {12313},
pages = {232--244},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-63061-4\_21},
doi = {10.1007/978-3-030-63061-4\_21},
timestamp = {Mon, 01 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cibb/CascianelliCCCN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibb/CeddiaPM19,
author = {Gaia Ceddia and
Sara Pid{\`{o}} and
Marco Masseroli},
editor = {Paolo Cazzaniga and
Daniela Besozzi and
Ivan Merelli and
Luca Manzoni},
title = {Network Modeling and Analysis of Normal and Cancer Gene Expression
Data},
booktitle = {Computational Intelligence Methods for Bioinformatics and Biostatistics
- 16th International Meeting, {CIBB} 2019, Bergamo, Italy, September
4-6, 2019, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {12313},
pages = {257--270},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-63061-4\_23},
doi = {10.1007/978-3-030-63061-4\_23},
timestamp = {Thu, 31 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cibb/CeddiaPM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibcb/CeddiaPCM19,
author = {Gaia Ceddia and
Pietro Pinoli and
Stefano Ceri and
Marco Masseroli},
editor = {Giacomo Baruzzo and
Sebastian Daberdaku and
Barbara Di Camillo and
Simone Furini and
Emanuele Domenico Giordano and
Giuseppe Nicosia},
title = {Non-negative Matrix Tri-Factorization for Data Integration and Network-based
Drug Repositioning},
booktitle = {{IEEE} Conference on Computational Intelligence in Bioinformatics
and Computational Biology, {CIBCB} 2019, Siena, Italy, July 9-11,
2019},
pages = {1--7},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/CIBCB.2019.8791474},
doi = {10.1109/CIBCB.2019.8791474},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cibcb/CeddiaPCM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwbbio/StamoulakatouPM19,
author = {Eirini Stamoulakatou and
Carlo Piccardi and
Marco Masseroli},
editor = {Ignacio Rojas and
Olga Valenzuela and
Fernando Rojas and
Francisco M. Ortu{\~{n}}o Guzman},
title = {Analysis of Gene Regulatory Networks Inferred from ChIP-seq Data},
booktitle = {Bioinformatics and Biomedical Engineering - 7th International Work-Conference,
{IWBBIO} 2019, Granada, Spain, May 8-10, 2019, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {11465},
pages = {319--331},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-17938-0\_29},
doi = {10.1007/978-3-030-17938-0\_29},
timestamp = {Mon, 05 Feb 2024 20:33:18 +0100},
biburl = {https://dblp.org/rec/conf/iwbbio/StamoulakatouPM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/Masseroli19,
author = {Marco Masseroli},
editor = {Shoba Ranganathan and
Michael Gribskov and
Kenta Nakai and
Christian Sch{\"{o}}nbach},
title = {Biological and Medical Ontologies: Introduction},
booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
1},
pages = {813--822},
publisher = {Elsevier},
year = {2019},
url = {https://doi.org/10.1016/b978-0-12-809633-8.20395-6},
doi = {10.1016/B978-0-12-809633-8.20395-6},
timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/reference/bioinf/Masseroli19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/Masseroli19a,
author = {Marco Masseroli},
editor = {Shoba Ranganathan and
Michael Gribskov and
Kenta Nakai and
Christian Sch{\"{o}}nbach},
title = {Biological and Medical Ontologies: {GO} and {GOA}},
booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
1},
pages = {823--831},
publisher = {Elsevier},
year = {2019},
url = {https://doi.org/10.1016/b978-0-12-809633-8.20491-3},
doi = {10.1016/B978-0-12-809633-8.20491-3},
timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/reference/bioinf/Masseroli19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/ChiccoM19,
author = {Davide Chicco and
Marco Masseroli},
editor = {Shoba Ranganathan and
Michael Gribskov and
Kenta Nakai and
Christian Sch{\"{o}}nbach},
title = {Biological and Medical Ontologies: Protein Ontology {(PRO)}},
booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
1},
pages = {832--837},
publisher = {Elsevier},
year = {2019},
url = {https://doi.org/10.1016/b978-0-12-809633-8.20396-8},
doi = {10.1016/B978-0-12-809633-8.20396-8},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/reference/bioinf/ChiccoM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/0002M19,
author = {Anna Bernasconi and
Marco Masseroli},
editor = {Shoba Ranganathan and
Michael Gribskov and
Kenta Nakai and
Christian Sch{\"{o}}nbach},
title = {Biological and Medical Ontologies: Disease Ontology {(DO)}},
booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
1},
pages = {838--847},
publisher = {Elsevier},
year = {2019},
url = {https://doi.org/10.1016/b978-0-12-809633-8.20397-x},
doi = {10.1016/B978-0-12-809633-8.20397-X},
timestamp = {Sat, 07 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/reference/bioinf/0002M19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/0002M19a,
author = {Anna Bernasconi and
Marco Masseroli},
editor = {Shoba Ranganathan and
Michael Gribskov and
Kenta Nakai and
Christian Sch{\"{o}}nbach},
title = {Biological and Medical Ontologies: Human Phenotype Ontology {(HPO)}},
booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
1},
pages = {848--857},
publisher = {Elsevier},
year = {2019},
url = {https://doi.org/10.1016/b978-0-12-809633-8.20398-1},
doi = {10.1016/B978-0-12-809633-8.20398-1},
timestamp = {Sat, 07 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/reference/bioinf/0002M19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/0002M19b,
author = {Anna Bernasconi and
Marco Masseroli},
editor = {Shoba Ranganathan and
Michael Gribskov and
Kenta Nakai and
Christian Sch{\"{o}}nbach},
title = {Biological and Medical Ontologies: Systems Biology Ontology {(SBO)}},
booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
1},
pages = {858--866},
publisher = {Elsevier},
year = {2019},
url = {https://doi.org/10.1016/b978-0-12-809633-8.20399-3},
doi = {10.1016/B978-0-12-809633-8.20399-3},
timestamp = {Sat, 07 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/reference/bioinf/0002M19b.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/Masseroli19b,
author = {Marco Masseroli},
editor = {Shoba Ranganathan and
Michael Gribskov and
Kenta Nakai and
Christian Sch{\"{o}}nbach},
title = {Integrative Bioinformatics},
booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
1},
pages = {1092--1098},
publisher = {Elsevier},
year = {2019},
url = {https://doi.org/10.1016/b978-0-12-809633-8.20388-9},
doi = {10.1016/B978-0-12-809633-8.20388-9},
timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/reference/bioinf/Masseroli19b.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JaliliMMM18,
author = {Vahid Jalili and
Matteo Matteucci and
Marco Masseroli and
Marco J. Morelli},
title = {Using combined evidence from replicates to evaluate ChIP-seq peaks},
journal = {Bioinform.},
volume = {34},
number = {13},
pages = {2338},
year = {2018},
url = {https://doi.org/10.1093/bioinformatics/bty119},
doi = {10.1093/BIOINFORMATICS/BTY119},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JaliliMMM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChiccoPM18,
author = {Davide Chicco and
Fernando Palluzzi and
Marco Masseroli},
title = {Novelty Indicator for Enhanced Prioritization of Predicted Gene Ontology
Annotations},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {15},
number = {3},
pages = {954--965},
year = {2018},
url = {https://doi.org/10.1109/TCBB.2017.2695459},
doi = {10.1109/TCBB.2017.2695459},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ChiccoPM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibb/0001MMM18,
author = {Fabrizio Frasca and
Matteo Matteucci and
Marco J. Morelli and
Marco Masseroli},
editor = {Maria Raposo and
Paulo A. Ribeiro and
Susana S{\'{e}}rio and
Antonino Staiano and
Angelo Ciaramella},
title = {Exposing and Characterizing Subpopulations of Distinctly Regulated
Genes by K-Plane Regression},
booktitle = {Computational Intelligence Methods for Bioinformatics and Biostatistics
- 15th International Meeting, {CIBB} 2018, Caparica, Portugal, September
6-8, 2018, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {11925},
pages = {227--238},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-34585-3\_20},
doi = {10.1007/978-3-030-34585-3\_20},
timestamp = {Thu, 06 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cibb/0001MMM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cikm/CeriCGKMNP18,
author = {Stefano Ceri and
Arif Canakoglu and
Andrea Gulino and
Abdulrahman Kaitoua and
Marco Masseroli and
Luca Nanni and
Pietro Pinoli},
editor = {Alfredo Cuzzocrea and
James Allan and
Norman W. Paton and
Divesh Srivastava and
Rakesh Agrawal and
Andrei Z. Broder and
Mohammed J. Zaki and
K. Sel{\c{c}}uk Candan and
Alexandros Labrinidis and
Assaf Schuster and
Haixun Wang},
title = {Demonstration of GenoMetric Query Language},
booktitle = {Proceedings of the 27th {ACM} International Conference on Information
and Knowledge Management, {CIKM} 2018, Torino, Italy, October 22-26,
2018},
pages = {1887--1890},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3269206.3269217},
doi = {10.1145/3269206.3269217},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cikm/CeriCGKMNP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/FrascaMMM18,
author = {Fabrizio Frasca and
Matteo Matteucci and
Marco Masseroli and
Marco J. Morelli},
title = {Modeling Gene Transcriptional Regulation by Means of Hyperplanes Genetic
Clustering},
booktitle = {2018 International Joint Conference on Neural Networks, {IJCNN} 2018,
Rio de Janeiro, Brazil, July 8-13, 2018},
pages = {1--8},
publisher = {{IEEE}},
year = {2018},
url = {https://doi.org/10.1109/IJCNN.2018.8489054},
doi = {10.1109/IJCNN.2018.8489054},
timestamp = {Wed, 16 Oct 2019 14:14:55 +0200},
biburl = {https://dblp.org/rec/conf/ijcnn/FrascaMMM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/JaliliMMM17,
author = {Vahid Jalili and
Matteo Matteucci and
Marco J. Morelli and
Marco Masseroli},
title = {MuSERA: Multiple Sample Enriched Region Assessment},
journal = {Briefings Bioinform.},
volume = {18},
number = {3},
pages = {367--381},
year = {2017},
url = {https://doi.org/10.1093/bib/bbw029},
doi = {10.1093/BIB/BBW029},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/JaliliMMM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/CambiaghiFM17,
author = {Alice Cambiaghi and
Manuela Ferrario and
Marco Masseroli},
title = {Analysis of metabolomic data: tools, current strategies and future
challenges for omics data integration},
journal = {Briefings Bioinform.},
volume = {18},
number = {3},
pages = {498--510},
year = {2017},
url = {https://doi.org/10.1093/bib/bbw031},
doi = {10.1093/BIB/BBW031},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/CambiaghiFM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CumboFCMW17,
author = {Fabio Cumbo and
Giulia Fiscon and
Stefano Ceri and
Marco Masseroli and
Emanuel Weitschek},
title = {{TCGA2BED:} extracting, extending, integrating, and querying The Cancer
Genome Atlas},
journal = {{BMC} Bioinform.},
volume = {18},
number = {1},
pages = {6:1--6:9},
year = {2017},
url = {https://doi.org/10.1186/s12859-016-1419-5},
doi = {10.1186/S12859-016-1419-5},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CumboFCMW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JaliliMMC17,
author = {Vahid Jalili and
Matteo Matteucci and
Marco Masseroli and
Stefano Ceri},
title = {Explorative visual analytics on interval-based genomic data and their
metadata},
journal = {{BMC} Bioinform.},
volume = {18},
number = {1},
pages = {536:1--536:15},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1945-9},
doi = {10.1186/S12859-017-1945-9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JaliliMMC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isci/JaliliMMC17,
author = {Vahid Jalili and
Matteo Matteucci and
Marco Masseroli and
Stefano Ceri},
title = {Indexing Next-Generation Sequencing data},
journal = {Inf. Sci.},
volume = {384},
pages = {90--109},
year = {2017},
url = {https://doi.org/10.1016/j.ins.2016.08.085},
doi = {10.1016/J.INS.2016.08.085},
timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/isci/JaliliMMC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/CeriKMPV17,
author = {Stefano Ceri and
Abdulrahman Kaitoua and
Marco Masseroli and
Pietro Pinoli and
Francesco Venco},
title = {Data Management for Heterogeneous Genomic Datasets},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {14},
number = {6},
pages = {1251--1264},
year = {2017},
url = {https://doi.org/10.1109/TCBB.2016.2576447},
doi = {10.1109/TCBB.2016.2576447},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/CeriKMPV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/data/CeriCKMP17,
author = {Stefano Ceri and
Arif Canakoglu and
Abdulrahman Kaitoua and
Marco Masseroli and
Pietro Pinoli},
editor = {Joaquim Filipe and
Jorge Bernardino and
Christoph Quix},
title = {Experiences in the Development of a Data Management System for Genomics},
booktitle = {Data Management Technologies and Applications - 6th International
Conference, {DATA} 2017, Madrid, Spain, July 24-26, 2017, Revised
Selected Papers},
series = {Communications in Computer and Information Science},
volume = {814},
pages = {197--212},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-94809-6\_10},
doi = {10.1007/978-3-319-94809-6\_10},
timestamp = {Tue, 16 Aug 2022 23:04:41 +0200},
biburl = {https://dblp.org/rec/conf/data/CeriCKMP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/BernasconiCCM17,
author = {Anna Bernasconi and
Stefano Ceri and
Alessandro Campi and
Marco Masseroli},
editor = {Heinrich C. Mayr and
Giancarlo Guizzardi and
Hui Ma and
Oscar Pastor},
title = {Conceptual Modeling for Genomics: Building an Integrated Repository
of Open Data},
booktitle = {Conceptual Modeling - 36th International Conference, {ER} 2017, Valencia,
Spain, November 6-9, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10650},
pages = {325--339},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-69904-2\_26},
doi = {10.1007/978-3-319-69904-2\_26},
timestamp = {Fri, 09 Apr 2021 18:46:55 +0200},
biburl = {https://dblp.org/rec/conf/er/BernasconiCCM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ieeehpcs/KaitouaGMPC17,
author = {Abdulrahman Kaitoua and
Andrea Gulino and
Marco Masseroli and
Pietro Pinoli and
Stefano Ceri},
title = {Scalable Genomic Data Management System on the Cloud},
booktitle = {2017 International Conference on High Performance Computing {\&}
Simulation, {HPCS} 2017, Genoa, Italy, July 17-21, 2017},
pages = {58--63},
publisher = {{IEEE}},
year = {2017},
url = {https://doi.org/10.1109/HPCS.2017.19},
doi = {10.1109/HPCS.2017.19},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ieeehpcs/KaitouaGMPC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/rcdl/CeriCKMP17,
author = {Stefano Ceri and
Arif Canakoglu and
Abdulrahman Kaitoua and
Marco Masseroli and
Pietro Pinoli},
editor = {Leonid A. Kalinichenko and
Yannis Manolopoulos and
Nikolay A. Skvortsov and
Vladimir Sukhomlin},
title = {Data-Driven Genomic Computing: Making sense of Signals from the Genome},
booktitle = {Selected Papers of the {XIX} International Conference on Data Analytics
and Management in Data Intensive Domains {(DAMDID/RCDL} 2017), Moscow,
Russia, October 9-13, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2022},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2022/paper01.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:54 +0100},
biburl = {https://dblp.org/rec/conf/rcdl/CeriCKMP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/rcdl/Ceri0CGKMNP17,
author = {Stefano Ceri and
Anna Bernasconi and
Arif Canakoglu and
Andrea Gulino and
Abdulrahman Kaitoua and
Marco Masseroli and
Luca Nanni and
Pietro Pinoli},
editor = {Leonid A. Kalinichenko and
Yannis Manolopoulos and
Oleg Malkov and
Nikolay A. Skvortsov and
Sergey A. Stupnikov and
Vladimir Sukhomlin},
title = {Overview of GeCo: {A} Project for Exploring and Integrating Signals
from the Genome},
booktitle = {Data Analytics and Management in Data Intensive Domains - {XIX} International
Conference, {DAMDID/RCDL} 2017, Moscow, Russia, October 10-13, 2017,
Revised Selected Papers},
series = {Communications in Computer and Information Science},
volume = {822},
pages = {46--57},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-96553-6\_4},
doi = {10.1007/978-3-319-96553-6\_4},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/rcdl/Ceri0CGKMNP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MilanesiGMM16,
author = {Luciano Milanesi and
Alessandro Guffanti and
Giancarlo Mauri and
Marco Masseroli},
title = {{BITS} 2015: the annual meeting of the Italian Society of Bioinformatics},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-12}},
pages = {1--4},
year = {2016},
url = {https://doi.org/10.1186/s12859-016-1187-2},
doi = {10.1186/S12859-016-1187-2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MilanesiGMM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmpb/DomeniconiMMP16,
author = {Giacomo Domeniconi and
Marco Masseroli and
Gianluca Moro and
Pietro Pinoli},
title = {Cross-organism learning method to discover new gene functionalities},
journal = {Comput. Methods Programs Biomed.},
volume = {126},
pages = {20--34},
year = {2016},
url = {https://doi.org/10.1016/j.cmpb.2015.12.002},
doi = {10.1016/J.CMPB.2015.12.002},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cmpb/DomeniconiMMP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MasseroliCC16,
author = {Marco Masseroli and
Arif Canakoglu and
Stefano Ceri},
title = {Integration and Querying of Genomic and Proteomic Semantic Annotations
for Biomedical Knowledge Extraction},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {13},
number = {2},
pages = {209--219},
year = {2016},
url = {https://doi.org/10.1109/TCBB.2015.2453944},
doi = {10.1109/TCBB.2015.2453944},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/MasseroliCC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/FernandezLMVC16,
author = {Javier D. Fern{\'{a}}ndez and
Maurizio Lenzerini and
Marco Masseroli and
Francesco Venco and
Stefano Ceri},
title = {Ontology-Based Search of Genomic Metadata},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {13},
number = {2},
pages = {233--247},
year = {2016},
url = {https://doi.org/10.1109/TCBB.2015.2495179},
doi = {10.1109/TCBB.2015.2495179},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/FernandezLMVC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChiccoM16,
author = {Davide Chicco and
Marco Masseroli},
title = {Ontology-Based Prediction and Prioritization of Gene Functional Annotations},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {13},
number = {2},
pages = {248--260},
year = {2016},
url = {https://doi.org/10.1109/TCBB.2015.2459694},
doi = {10.1109/TCBB.2015.2459694},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ChiccoM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkde/MontanariBCPCM16,
author = {Piero Montanari and
Ilaria Bartolini and
Paolo Ciaccia and
Marco Patella and
Stefano Ceri and
Marco Masseroli},
title = {Pattern Similarity Search in Genomic Sequences},
journal = {{IEEE} Trans. Knowl. Data Eng.},
volume = {28},
number = {11},
pages = {3053--3067},
year = {2016},
url = {https://doi.org/10.1109/TKDE.2016.2595582},
doi = {10.1109/TKDE.2016.2595582},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tkde/MontanariBCPCM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/edbt/CeriKMPV16,
author = {Stefano Ceri and
Abdulrahman Kaitoua and
Marco Masseroli and
Pietro Pinoli and
Francesco Venco},
editor = {Evaggelia Pitoura and
Sofian Maabout and
Georgia Koutrika and
Am{\'{e}}lie Marian and
Letizia Tanca and
Ioana Manolescu and
Kostas Stefanidis},
title = {Data Management for Next Generation Genomic Computing},
booktitle = {Proceedings of the 19th International Conference on Extending Database
Technology, {EDBT} 2016, Bordeaux, France, March 15-16, 2016, Bordeaux,
France, March 15-16, 2016},
pages = {485--490},
publisher = {OpenProceedings.org},
year = {2016},
url = {https://doi.org/10.5441/002/edbt.2016.46},
doi = {10.5441/002/EDBT.2016.46},
timestamp = {Fri, 29 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/edbt/CeriKMPV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwbbio/CanakogluCM16,
author = {Arif Canakoglu and
Stefano Ceri and
Marco Masseroli},
editor = {Francisco M. Ortu{\~{n}}o Guzman and
Ignacio Rojas},
title = {Biomolecular Annotation Integration and Querying to Help Unveiling
New Biomedical Knowledge},
booktitle = {Bioinformatics and Biomedical Engineering - 4th International Conference,
{IWBBIO} 2016, Granada, Spain, April 20-22, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9656},
pages = {802--813},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-31744-1\_69},
doi = {10.1007/978-3-319-31744-1\_69},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iwbbio/CanakogluCM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sebd/MontanariBCPCM16,
author = {Piero Montanari and
Ilaria Bartolini and
Paolo Ciaccia and
Marco Patella and
Stefano Ceri and
Marco Masseroli},
editor = {Mario A. Bochicchio and
Giansalvatore Mecca},
title = {Looking for Similar Patterns in Genomic Sequences},
booktitle = {24th Italian Symposium on Advanced Database Systems, {SEBD} 2016,
Ugento, Lecce, Italy, June 19-22, 2016, Ugento, Lecce, Italia, June
19-22, 2016},
pages = {110--117},
publisher = {Matematicamente.it},
year = {2016},
timestamp = {Mon, 12 Sep 2016 14:17:13 +0200},
biburl = {https://dblp.org/rec/conf/sebd/MontanariBCPCM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MasseroliPVKJPM15,
author = {Marco Masseroli and
Pietro Pinoli and
Francesco Venco and
Abdulrahman Kaitoua and
Vahid Jalili and
Fernando Palluzzi and
Heiko M{\"{u}}ller and
Stefano Ceri},
title = {GenoMetric Query Language: a novel approach to large-scale genomic
data management},
journal = {Bioinform.},
volume = {31},
number = {12},
pages = {1881--1888},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btv048},
doi = {10.1093/BIOINFORMATICS/BTV048},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MasseroliPVKJPM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JaliliMMM15,
author = {Vahid Jalili and
Matteo Matteucci and
Marco Masseroli and
Marco J. Morelli},
title = {Using combined evidence from replicates to evaluate ChIP-seq peaks},
journal = {Bioinform.},
volume = {31},
number = {17},
pages = {2761--2769},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btv293},
doi = {10.1093/BIOINFORMATICS/BTV293},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JaliliMMM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PinoliCM15,
author = {Pietro Pinoli and
Davide Chicco and
Marco Masseroli},
title = {Computational algorithms to predict Gene Ontology annotations},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-6}},
pages = {S4},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S6-S4},
doi = {10.1186/1471-2105-16-S6-S4},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PinoliCM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChiccoM15,
author = {Davide Chicco and
Marco Masseroli},
title = {Software Suite for Gene and Protein Annotation Prediction and Similarity
Search},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {12},
number = {4},
pages = {837--843},
year = {2015},
url = {https://doi.org/10.1109/TCBB.2014.2382127},
doi = {10.1109/TCBB.2014.2382127},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ChiccoM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibb/ChiccoM15,
author = {Davide Chicco and
Marco Masseroli},
editor = {Claudia Angelini and
Paola M. V. Rancoita and
Stefano Rovetta},
title = {Validation Pipeline for Computational Prediction of Genomics Annotations},
booktitle = {Computational Intelligence Methods for Bioinformatics and Biostatistics
- 12th International Meeting, {CIBB} 2015, Naples, Italy, September
10-12, 2015, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {9874},
pages = {233--244},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-44332-4\_18},
doi = {10.1007/978-3-319-44332-4\_18},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cibb/ChiccoM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RomanoLM14,
author = {Paolo Romano and
Fr{\'{e}}d{\'{e}}rique Lisacek and
Marco Masseroli},
title = {{NETTAB} 2012 on "Integrated Bio-Search"},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-1}},
pages = {S1},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S1-S1},
doi = {10.1186/1471-2105-15-S1-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RomanoLM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MasseroliMBCKRLR14,
author = {Marco Masseroli and
Barend Mons and
Erik Bongcam{-}Rudloff and
Stefano Ceri and
Alexander E. Kel and
Fran{\c{c}}ois Rechenmann and
Fr{\'{e}}d{\'{e}}rique Lisacek and
Paolo Romano},
title = {Integrated Bio-Search: challenges and trends for the integration,
search and comprehensive processing of biological information},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-1}},
pages = {S2},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S1-S2},
doi = {10.1186/1471-2105-15-S1-S2},
timestamp = {Thu, 29 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MasseroliMBCKRLR14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MasseroliPGC14,
author = {Marco Masseroli and
Matteo Picozzi and
Giorgio Ghisalberti and
Stefano Ceri},
title = {Explorative search of distributed bio-data to answer complex biomedical
questions},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-1}},
pages = {S3},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S1-S3},
doi = {10.1186/1471-2105-15-S1-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MasseroliPGC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibb/ChiccoCM14,
author = {Davide Chicco and
Eleonora Ciceri and
Marco Masseroli},
editor = {Clelia Di Serio and
Pietro Li{\`{o}} and
Alessandro Nonis and
Roberto Tagliaferri},
title = {Extended Spearman and Kendall Coefficients for Gene Annotation List
Correlation},
booktitle = {Computational Intelligence Methods for Bioinformatics and Biostatistics
- 11th International Meeting, {CIBB} 2014, Cambridge, UK, June 26-28,
2014, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {8623},
pages = {19--32},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-24462-4\_2},
doi = {10.1007/978-3-319-24462-4\_2},
timestamp = {Wed, 25 Sep 2019 18:13:08 +0200},
biburl = {https://dblp.org/rec/conf/cibb/ChiccoCM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibcb/PinoliCM14,
author = {Pietro Pinoli and
Davide Chicco and
Marco Masseroli},
title = {Latent Dirichlet Allocation based on Gibbs Sampling for gene function
prediction},
booktitle = {{IEEE} Conference on Computational Intelligence in Bioinformatics
and Computational Biology, {CIBCB} 2014, Honolulu, HI, USA, May 21-24,
2014},
pages = {1--8},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/CIBCB.2014.6845514},
doi = {10.1109/CIBCB.2014.6845514},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cibcb/PinoliCM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ic3k/DomeniconiMMP14,
author = {Giacomo Domeniconi and
Marco Masseroli and
Gianluca Moro and
Pietro Pinoli},
editor = {Ana L. N. Fred and
Joaquim Filipe},
title = {Discovering New Gene Functionalities from Random Perturbations of
Known Gene Ontological Annotations},
booktitle = {{KDIR} 2014 - Proceedings of the International Conference on Knowledge
Discovery and Information Retrieval, Rome, Italy, 21 - 24 October,
2014},
pages = {107--116},
publisher = {SciTePress},
year = {2014},
url = {https://doi.org/10.5220/0005087801070116},
doi = {10.5220/0005087801070116},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ic3k/DomeniconiMMP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ic3k/DomeniconiMMP14a,
author = {Giacomo Domeniconi and
Marco Masseroli and
Gianluca Moro and
Pietro Pinoli},
editor = {Ana L. N. Fred and
Jan L. G. Dietz and
David Aveiro and
Kecheng Liu and
Joaquim Filipe},
title = {Random Perturbations of Term Weighted Gene Ontology Annotations for
Discovering Gene Unknown Functionalities},
booktitle = {Knowledge Discovery, Knowledge Engineering and Knowledge Management
- 6th International Joint Conference, {IC3K} 2014, Rome, Italy, October
21-24, 2014, Revised Selected Papers},
series = {Communications in Computer and Information Science},
volume = {553},
pages = {181--197},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-25840-9\_12},
doi = {10.1007/978-3-319-25840-9\_12},
timestamp = {Tue, 16 Aug 2022 23:04:35 +0200},
biburl = {https://dblp.org/rec/conf/ic3k/DomeniconiMMP14a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/CanakogluMCTGC13,
author = {Arif Canakoglu and
Marco Masseroli and
Stefano Ceri and
Luca Tettamanti and
Giorgio Ghisalberti and
Alessandro Campi},
title = {Integrative warehousing of biomolecular information to support complex
multi-topic queries for biomedical knowledge discovery},
booktitle = {13th {IEEE} International Conference on BioInformatics and BioEngineering,
{BIBE} 2013, Chania, Greece, November 10-13, 2013},
pages = {1--4},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/BIBE.2013.6701584},
doi = {10.1109/BIBE.2013.6701584},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/CanakogluMCTGC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/ChiccoM13,
author = {Davide Chicco and
Marco Masseroli},
title = {A discrete optimization approach for {SVD} best truncation choice
based on {ROC} curves},
booktitle = {13th {IEEE} International Conference on BioInformatics and BioEngineering,
{BIBE} 2013, Chania, Greece, November 10-13, 2013},
pages = {1--4},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/BIBE.2013.6701705},
doi = {10.1109/BIBE.2013.6701705},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/ChiccoM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/PinoliCM13,
author = {Pietro Pinoli and
Davide Chicco and
Marco Masseroli},
title = {Enhanced probabilistic latent semantic analysis with weighting schemes
to predict genomic annotations},
booktitle = {13th {IEEE} International Conference on BioInformatics and BioEngineering,
{BIBE} 2013, Chania, Greece, November 10-13, 2013},
pages = {1--4},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/BIBE.2013.6701702},
doi = {10.1109/BIBE.2013.6701702},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/PinoliCM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibb/PinoliCM13,
author = {Pietro Pinoli and
Davide Chicco and
Marco Masseroli},
editor = {Enrico Formenti and
Roberto Tagliaferri and
Ernst Wit},
title = {Weighting Scheme Methods for Enhanced Genomic Annotation Prediction},
booktitle = {Computational Intelligence Methods for Bioinformatics and Biostatistics
- 10th International Meeting, {CIBB} 2013, Nice, France, June 20-22,
2013, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {8452},
pages = {76--89},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-319-09042-9\_6},
doi = {10.1007/978-3-319-09042-9\_6},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cibb/PinoliCM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BellazziMMSR12,
author = {Riccardo Bellazzi and
Marco Masseroli and
Shawn N. Murphy and
Amnon Shabo and
Paolo Romano},
title = {Clinical Bioinformatics: challenges and opportunities},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S1},
doi = {10.1186/1471-2105-13-S14-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BellazziMMSR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/MasseroliCP12,
author = {Marco Masseroli and
Davide Chicco and
Pietro Pinoli},
title = {Probabilistic Latent Semantic Analysis for prediction of Gene Ontology
annotations},
booktitle = {The 2012 International Joint Conference on Neural Networks (IJCNN),
Brisbane, Australia, June 10-15, 2012},
pages = {1--8},
publisher = {{IEEE}},
year = {2012},
url = {https://doi.org/10.1109/IJCNN.2012.6252767},
doi = {10.1109/IJCNN.2012.6252767},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ijcnn/MasseroliCP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/MasseroliGC11,
author = {Marco Masseroli and
Giorgio Ghisalberti and
Stefano Ceri},
title = {Bio-Search Computing: Integration and global ranking of bioinformatics
search results},
journal = {J. Integr. Bioinform.},
volume = {8},
number = {2},
year = {2011},
url = {https://doi.org/10.2390/biecoll-jib-2011-166},
doi = {10.2390/BIECOLL-JIB-2011-166},
timestamp = {Tue, 14 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jib/MasseroliGC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/GhisalbertiMV11,
author = {Giorgio Ghisalberti and
Marco Masseroli and
Salvatore Vadacca},
title = {Multi-domain data search and retrieval: {A} service-oriented Life
Science scenario},
booktitle = {Proceedings of the 24th {IEEE} International Symposium on Computer-Based
Medical Systems, 27-30 June, 2011, Bristol, United Kingdom},
pages = {1--6},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/CBMS.2011.5999045},
doi = {10.1109/CBMS.2011.5999045},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cbms/GhisalbertiMV11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibb/CanakogluGM11,
author = {Arif Canakoglu and
Giorgio Ghisalberti and
Marco Masseroli},
editor = {Elia Biganzoli and
Alfredo Vellido and
Federico Ambrogi and
Roberto Tagliaferri},
title = {Integration of Biomolecular Interaction Data in a Genomic and Proteomic
Data Warehouse to Support Biomedical Knowledge Discovery},
booktitle = {Computational Intelligence Methods for Bioinformatics and Biostatistics,
8th International Meeting, {CIBB} 2011, Gargnano del Garda, Italy,
June 30 - July 2, 2011, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {7548},
pages = {112--126},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-35686-5\_10},
doi = {10.1007/978-3-642-35686-5\_10},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cibb/CanakogluGM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibb/ChiccoTM11,
author = {Davide Chicco and
Marco Tagliasacchi and
Marco Masseroli},
editor = {Elia Biganzoli and
Alfredo Vellido and
Federico Ambrogi and
Roberto Tagliaferri},
title = {Genomic Annotation Prediction Based on Integrated Information},
booktitle = {Computational Intelligence Methods for Bioinformatics and Biostatistics,
8th International Meeting, {CIBB} 2011, Gargnano del Garda, Italy,
June 30 - July 2, 2011, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {7548},
pages = {238--252},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-35686-5\_20},
doi = {10.1007/978-3-642-35686-5\_20},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cibb/ChiccoTM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isda/MasseroliTC11,
author = {Marco Masseroli and
Marco Tagliasacchi and
Davide Chicco},
editor = {Sebasti{\'{a}}n Ventura and
Ajith Abraham and
Krzysztof J. Cios and
Crist{\'{o}}bal Romero and
Francesco Marcelloni and
Jos{\'{e}} Manuel Ben{\'{\i}}tez and
Eva Lucrecia Gibaja Galindo},
title = {Semantically improved genome-wide prediction of Gene Ontology annotations},
booktitle = {11th International Conference on Intelligent Systems Design and Applications,
{ISDA} 2011, C{\'{o}}rdoba, Spain, November 22-24, 2011},
pages = {1080--1085},
publisher = {{IEEE}},
year = {2011},
url = {https://doi.org/10.1109/ISDA.2011.6121802},
doi = {10.1109/ISDA.2011.6121802},
timestamp = {Tue, 23 Aug 2022 09:19:48 +0200},
biburl = {https://dblp.org/rec/conf/isda/MasseroliTC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:journals/procedia/MasseroliGC11,
author = {Marco Masseroli and
Giorgio Ghisalberti and
Stefano Ceri},
editor = {Mitsuhisa Sato and
Satoshi Matsuoka and
Peter M. A. Sloot and
G. Dick van Albada and
Jack J. Dongarra},
title = {Bio Search Computing: Bioinformatics web service integration for data-driven
answering of complex Life Science questions},
booktitle = {Proceedings of the International Conference on Computational Science,
{ICCS} 2011, Nanyang Technological University, Singapore, 1-3 June,
2011},
series = {Procedia Computer Science},
volume = {4},
pages = {1082--1091},
publisher = {Elsevier},
year = {2011},
url = {https://doi.org/10.1016/j.procs.2011.04.115},
doi = {10.1016/J.PROCS.2011.04.115},
timestamp = {Thu, 08 Jul 2021 16:04:01 +0200},
biburl = {https://dblp.org/rec/journals/procedia/MasseroliGC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/GhisalbertiMT10,
author = {Giorgio Ghisalberti and
Marco Masseroli and
Luca Tettamanti},
title = {Quality controls in integrative approaches to detect errors and inconsistencies
in biological databases},
journal = {J. Integr. Bioinform.},
volume = {7},
number = {3},
year = {2010},
url = {https://doi.org/10.2390/biecoll-jib-2010-119},
doi = {10.2390/BIECOLL-JIB-2010-119},
timestamp = {Tue, 14 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jib/GhisalbertiMT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/MasseroliGT10,
author = {Marco Masseroli and
Giorgio Ghisalberti and
Luca Tettamanti},
title = {Detection of Errors and Inconsistencies in Biomolecular Databases
through Integrative Approaches and Quality Controls},
booktitle = {10th {IEEE} International Conference on Bioinformatics and Bioengineering,
{BIBE} 2010, Philadelphia, Pennsylvania, USA, May 31-June 3 2010},
pages = {294--295},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/BIBE.2010.60},
doi = {10.1109/BIBE.2010.60},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/MasseroliGT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/TagliasacchiSM10,
author = {Marco Tagliasacchi and
Roberto Sarati and
Marco Masseroli},
title = {Prediction of Gene Ontology Annotations Based on Gene Functional Clustering},
booktitle = {10th {IEEE} International Conference on Bioinformatics and Bioengineering,
{BIBE} 2010, Philadelphia, Pennsylvania, USA, May 31-June 3 2010},
pages = {312--313},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/BIBE.2010.69},
doi = {10.1109/BIBE.2010.69},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/TagliasacchiSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dils/MasseroliPG10,
author = {Marco Masseroli and
Norman W. Paton and
Giorgio Ghisalberti},
editor = {Patrick Lambrix and
Graham J. L. Kemp},
title = {Search Computing: Integrating Ranked Data in the Life Sciences},
booktitle = {Data Integration in the Life Sciences, 7th International Conference,
{DILS} 2010, Gothenburg, Sweden, August 25-27, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6254},
pages = {207--214},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-15120-0\_16},
doi = {10.1007/978-3-642-15120-0\_16},
timestamp = {Tue, 14 May 2019 10:00:43 +0200},
biburl = {https://dblp.org/rec/conf/dils/MasseroliPG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/seco/MasseroliG10,
author = {Marco Masseroli and
Giorgio Ghisalberti},
editor = {Stefano Ceri and
Marco Brambilla},
title = {Bio-SeCo: Integration and Global Ranking of Biomedical Search Results},
booktitle = {Search Computing - Trends and Developments [outcome of the second
SeCO Workshop on Search Computing, Como/Milan, Italy, May 25-31, 2010]},
series = {Lecture Notes in Computer Science},
volume = {6585},
pages = {203--214},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-19668-3\_19},
doi = {10.1007/978-3-642-19668-3\_19},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/seco/MasseroliG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/anis/MasseroliT10,
author = {Marco Masseroli and
Marco Tagliasacchi},
editor = {Athina Lazakidou},
title = {Web Resources for Gene List Analysis in Biomedicine},
booktitle = {Web-Based Applications in Healthcare and Biomedicine},
series = {Annals of Information Systems},
volume = {7},
pages = {117--141},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-1-4419-1274-9\_8},
doi = {10.1007/978-1-4419-1274-9\_8},
timestamp = {Tue, 16 May 2017 14:24:39 +0200},
biburl = {https://dblp.org/rec/series/anis/MasseroliT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DAntonioM09,
author = {Matteo D'Antonio and
Marco Masseroli},
title = {Extraction, integration and analysis of alternative splicing and protein
structure distributed information},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-12}},
pages = {15},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S12-S15},
doi = {10.1186/1471-2105-10-S12-S15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DAntonioM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/TagliasacchiM09,
author = {Marco Tagliasacchi and
Marco Masseroli},
editor = {Jeffrey J. P. Tsai and
Phillip C.{-}Y. Sheu and
Han C. W. Hsiao},
title = {Anomaly-free Prediction of Gene Ontology Annotations Using Bayesian
Networks},
booktitle = {Ninth {IEEE} International Conference on Bioinformatics and Bioengineering,
{BIBE} 2009, June 22-24, 2009, Taichung, Taiwan},
pages = {107--114},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/BIBE.2009.7},
doi = {10.1109/BIBE.2009.7},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/TagliasacchiM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/GiarratanaPMML09,
author = {Gabriele Giarratana and
Marco Pizzera and
Marco Masseroli and
Enzo Medico and
Pier Luca Lanzi},
editor = {Jeffrey J. P. Tsai and
Phillip C.{-}Y. Sheu and
Han C. W. Hsiao},
title = {Data Mining Techniques for the Identification of Genes with Expression
Levels Related to Breast Cancer Prognosis},
booktitle = {Ninth {IEEE} International Conference on Bioinformatics and Bioengineering,
{BIBE} 2009, June 22-24, 2009, Taichung, Taiwan},
pages = {295--300},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/BIBE.2009.37},
doi = {10.1109/BIBE.2009.37},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/GiarratanaPMML09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dils/MasseroliCC09,
author = {Marco Masseroli and
Stefano Ceri and
Alessandro Campi},
editor = {Norman W. Paton and
Paolo Missier and
Cornelia Hedeler},
title = {Integration and Mining of Genomic Annotations: Experiences and Perspectives
in GFINDer Data Warehousing},
booktitle = {Data Integration in the Life Sciences, 6th International Workshop,
{DILS} 2009, Manchester, UK, July 20-22, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5647},
pages = {88--95},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-02879-3\_8},
doi = {10.1007/978-3-642-02879-3\_8},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dils/MasseroliCC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/seco/MasseroliPS09,
author = {Marco Masseroli and
Norman W. Paton and
Irena Spasic},
editor = {Stefano Ceri and
Marco Brambilla},
title = {Search Computing and the Life Sciences},
booktitle = {Search Computing: Challenges and Directions [outcome of the first
SeCO Workshop on Search Computing Challenges and Directions, Como,
Italy, June 17-19, 2009]},
series = {Lecture Notes in Computer Science},
volume = {5950},
pages = {291--306},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-12310-8\_15},
doi = {10.1007/978-3-642-12310-8\_15},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/seco/MasseroliPS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/shti/BonacinaPMMPMP09,
author = {Stefano Bonacina and
Ylenia Adelaide Privitera and
Serena Marsilio and
Eros Montin and
Federica Passarelli and
Marco Masseroli and
Francesco Pinciroli},
editor = {Brenda K. Wiederhold and
Giuseppe Riva},
title = {A Web-Based Tool for Cooperating Behaviors in Eating and Physical
Activity Control},
booktitle = {Annual Review of Cybertherapy and Telemedicine 2009 - Advanced Technologies
in the Behavioral, Social and Neurosciences},
series = {Studies in Health Technology and Informatics},
volume = {144},
pages = {155--159},
publisher = {{IOS} Press},
year = {2009},
url = {https://doi.org/10.3233/978-1-60750-017-9-155},
doi = {10.3233/978-1-60750-017-9-155},
timestamp = {Mon, 08 Aug 2022 21:35:40 +0200},
biburl = {https://dblp.org/rec/series/shti/BonacinaPMMPMP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/MasseroliM08,
author = {Marco Masseroli and
Mario Marchente},
title = {{X-PAT:} {A} Multiplatform Patient Referral Data Management System
for Small Healthcare Institution Requirements},
journal = {{IEEE} Trans. Inf. Technol. Biomed.},
volume = {12},
number = {4},
pages = {424--432},
year = {2008},
url = {https://doi.org/10.1109/TITB.2007.910359},
doi = {10.1109/TITB.2007.910359},
timestamp = {Wed, 13 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/titb/MasseroliM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MasseroliBFP07,
author = {Marco Masseroli and
Elisa Bellistri and
Andrea Franceschini and
Francesco Pinciroli},
title = {Statistical analysis of genomic protein family and domain controlled
annotations for functional investigation of classified gene lists},
journal = {{BMC} Bioinform.},
volume = {8},
number = {{S-1}},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-S1-S14},
doi = {10.1186/1471-2105-8-S1-S14},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MasseroliBFP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sigmod/CeriBBBCCFLMMNPPQST07,
author = {Stefano Ceri and
Cristiana Bolchini and
Daniele Braga and
Marco Brambilla and
Alessandro Campi and
Sara Comai and
Piero Fraternali and
Pier Luca Lanzi and
Marco Masseroli and
Maristella Matera and
Mauro Negri and
Giuseppe Pelagatti and
Giuseppe Pozzi and
Elisa Quintarelli and
Fabio Alberto Schreiber and
Letizia Tanca},
title = {Data and web management research at Politecnico di Milano},
journal = {{SIGMOD} Rec.},
volume = {36},
number = {4},
pages = {43--48},
year = {2007},
url = {https://doi.org/10.1145/1361348.1361359},
doi = {10.1145/1361348.1361359},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/sigmod/CeriBBBCCFLMMNPPQST07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/Masseroli07,
author = {Marco Masseroli},
title = {Management and Analysis of Genomic Functional and Phenotypic Controlled
Annotations to Support Biomedical Investigation and Practice},
journal = {{IEEE} Trans. Inf. Technol. Biomed.},
volume = {11},
number = {4},
pages = {376--385},
year = {2007},
url = {https://doi.org/10.1109/TITB.2006.884367},
doi = {10.1109/TITB.2006.884367},
timestamp = {Wed, 13 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/titb/Masseroli07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MasseroliKLR06,
author = {Marco Masseroli and
Halil Kilicoglu and
Fran{\c{c}}ois{-}Michel Lang and
Thomas C. Rindflesch},
title = {Argument-predicate distance as a filter for enhancing precision in
extracting predications on the genetic etiology of disease},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {291},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-291},
doi = {10.1186/1471-2105-7-291},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MasseroliKLR06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/MasseroliVBP06,
author = {Marco Masseroli and
Alberto Visconti and
Simone Giovanni Bano and
Francesco Pinciroli},
title = {He@lthCo-op: a web-based system to support distributed healthcare
co-operative work},
journal = {Comput. Biol. Medicine},
volume = {36},
number = {2},
pages = {109--127},
year = {2006},
url = {https://doi.org/10.1016/j.compbiomed.2004.09.005},
doi = {10.1016/J.COMPBIOMED.2004.09.005},
timestamp = {Wed, 02 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/MasseroliVBP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/MasseroliP06,
author = {Marco Masseroli and
Francesco Pinciroli},
title = {Using Gene Ontology and genomic controlled vocabularies to analyze
high-throughput gene lists: Three tool comparison},
journal = {Comput. Biol. Medicine},
volume = {36},
number = {7-8},
pages = {731--747},
year = {2006},
url = {https://doi.org/10.1016/j.compbiomed.2005.04.008},
doi = {10.1016/J.COMPBIOMED.2005.04.008},
timestamp = {Wed, 02 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/MasseroliP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BurgarellaCM06,
author = {Sarah Burgarella and
Dario Cattaneo and
Marco Masseroli},
title = {A Web-Based Multi-Database System Supporting Distributed Collaborative
Management and Sharing of Microarray Experiment Information},
booktitle = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 11-15, 2006},
publisher = {{AMIA}},
year = {2006},
url = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-002-1.622268/f-001-1.622269/a-196-1.623155/a-197-1.623152},
timestamp = {Wed, 17 Apr 2024 11:48:16 +0200},
biburl = {https://dblp.org/rec/conf/amia/BurgarellaCM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/CognoGBPM06,
author = {Francesco Cogno and
Marco Galimberti and
Stefano Bonacina and
Francesco Pinciroli and
Marco Masseroli},
title = {{GALCO:} a Web-Based System for Biomedical Information Sharing},
booktitle = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 11-15, 2006},
publisher = {{AMIA}},
year = {2006},
url = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-002-1.622268/f-001-1.622269/a-221-1.623080/a-222-1.623077},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/CognoGBPM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MaffezzoliFBPM06,
author = {Andrea Maffezzoli and
Andrea Franceschini and
Elisa Bellistri and
Francesco Pinciroli and
Marco Masseroli},
title = {Genomic Functional Investigation through Statistical Analysis of Protein
Families and Domains},
booktitle = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 11-15, 2006},
publisher = {{AMIA}},
year = {2006},
url = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-002-1.622268/f-001-1.622269/a-348-1.622696/a-349-1.622693},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/MaffezzoliFBPM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MazzolaLMP06,
author = {Luca Mazzola and
Gianpiero Limongiello and
Marco Masseroli and
Francesco Pinciroli},
title = {{PLARIS:} a Web Framework for Offering Automatically Classified Biomedical
Multimedia Resources},
booktitle = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 11-15, 2006},
publisher = {{AMIA}},
year = {2006},
url = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-002-1.622268/f-001-1.622269/a-355-1.622675/a-356-1.622672},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/MazzolaLMP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MontanariMP06,
author = {Enrico Montanari and
Marco Masseroli and
Francesco Pinciroli},
title = {A Web System for Management of Medical Informatics Courses at "Politecnico
di Milano"},
booktitle = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 11-15, 2006},
publisher = {{AMIA}},
year = {2006},
url = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-002-1.622268/f-001-1.622269/a-366-1.622642/a-367-1.622639},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/MontanariMP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/BonacinaM06,
author = {Stefano Bonacina and
Marco Masseroli},
title = {A Web Application for Managing Data of Cardiovascular Risk Patients},
booktitle = {28th International Conference of the {IEEE} Engineering in Medicine
and Biology Society, {EMBC} 2006, New York City, NY, USA, August 30
- September 3, 2006, Main Volume},
pages = {6324--6327},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/IEMBS.2006.259952},
doi = {10.1109/IEMBS.2006.259952},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/embc/BonacinaM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BurgarellaCPM05,
author = {Sarah Burgarella and
Dario Cattaneo and
Francesco Pinciroli and
Marco Masseroli},
title = {MicroGen: a {MIAME} compliant web system for microarray experiment
information and workflow management},
journal = {{BMC} Bioinform.},
volume = {6},
number = {{S-4}},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-S4-S6},
doi = {10.1186/1471-2105-6-S4-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BurgarellaCPM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MasseroliGMGP05,
author = {Marco Masseroli and
Osvaldo Galati and
Mauro Manzotti and
Karina Gibert and
Francesco Pinciroli},
title = {Inherited disorder phenotypes: controlled annotation and statistical
analysis for knowledge mining from gene lists},
journal = {{BMC} Bioinform.},
volume = {6},
number = {{S-4}},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-S4-S18},
doi = {10.1186/1471-2105-6-S4-S18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MasseroliGMGP05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijseke/MasseroliSAP05,
author = {Marco Masseroli and
Andrea Stella and
Myriam Alcalay and
Francesco Pinciroli},
title = {Genewebex: Gene Annotation Web Extraction, Aggregation, and Updating
From Web-Interfaced Biomolecular Databanks},
journal = {Int. J. Softw. Eng. Knowl. Eng.},
volume = {15},
number = {3},
pages = {511--526},
year = {2005},
url = {https://doi.org/10.1142/S0218194005002403},
doi = {10.1142/S0218194005002403},
timestamp = {Wed, 22 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijseke/MasseroliSAP05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MasseroliGP05,
author = {Marco Masseroli and
Osvaldo Galati and
Francesco Pinciroli},
title = {GFINDer: genetic disease and phenotype location statistical analysis
and mining of dynamically annotated gene lists},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Web-Server-Issue},
pages = {717--723},
year = {2005},
url = {https://doi.org/10.1093/nar/gki454},
doi = {10.1093/NAR/GKI454},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MasseroliGP05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismda/PisanelliPM05,
author = {Domenico M. Pisanelli and
Francesco Pinciroli and
Marco Masseroli},
editor = {Jos{\'{e}} Lu{\'{\i}}s Oliveira and
Victor Maojo and
Fernando Mart{\'{\i}}n{-}S{\'{a}}nchez and
Ant{\'{o}}nio Sousa Pereira},
title = {The Ontological Lens: Zooming in and out from Genomic to Clinical
Level},
booktitle = {Biological and Medical Data Analysis, 6th International Symposium,
{ISBMDA} 2005, Aveiro, Portugal, November 10-11, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3745},
pages = {44--50},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11573067\_5},
doi = {10.1007/11573067\_5},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/ismda/PisanelliPM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismda/BonacinaMP05,
author = {Stefano Bonacina and
Marco Masseroli and
Francesco Pinciroli},
editor = {Jos{\'{e}} Lu{\'{\i}}s Oliveira and
Victor Maojo and
Fernando Mart{\'{\i}}n{-}S{\'{a}}nchez and
Ant{\'{o}}nio Sousa Pereira},
title = {Foreseeing Promising Bio-medical Findings for Effective Applications
of Data Mining},
booktitle = {Biological and Medical Data Analysis, 6th International Symposium,
{ISBMDA} 2005, Aveiro, Portugal, November 10-11, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3745},
pages = {130--136},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11573067\_14},
doi = {10.1007/11573067\_14},
timestamp = {Sat, 16 Sep 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismda/BonacinaMP05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mie/BonacinaDMP05,
author = {Stefano Bonacina and
Lorenza Draghi and
Marco Masseroli and
Francesco Pinciroli},
editor = {Rolf Engelbrecht and
Antoine Geissb{\"{u}}hler and
Christian Lovis and
George I. Mihalas},
title = {Understanding Telecardiology Success and Pitfalls by a Systematic
Review},
booktitle = {Connecting Medical Informatics and Bio-Informatics - Proceedings of
{MIE} 2005 - The XIXth International Congress of the European Federation
for Medical Informatics, Geneva, Switzerland},
series = {Studies in Health Technology and Informatics},
volume = {116},
pages = {373--378},
publisher = {{IOS} Press},
year = {2005},
url = {http://ebooks.iospress.nl/volumearticle/10330},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/mie/BonacinaDMP05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MasseroliSMAP04,
author = {Marco Masseroli and
Andrea Stella and
Natalia Meani and
Myriam Alcalay and
Francesco Pinciroli},
title = {MyWEST: My Web Extraction Software Tool for effective mining of annotations
from web-based databanks},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3326--3335},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth392},
doi = {10.1093/BIOINFORMATICS/BTH392},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MasseroliSMAP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MasseroliMP04,
author = {Marco Masseroli and
Dario Martucci and
Francesco Pinciroli},
title = {GFINDer: Genome Function INtegrated Discoverer through dynamic annotation,
statistical analysis, and mining},
journal = {Nucleic Acids Res.},
volume = {32},
number = {Web-Server-Issue},
pages = {293--300},
year = {2004},
url = {https://doi.org/10.1093/nar/gkh432},
doi = {10.1093/NAR/GKH432},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MasseroliMP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/MasseroliSMAP04,
author = {Marco Masseroli and
Andrea Stella and
Natalia Meani and
Myriam Alcalay and
Francesco Pinciroli},
title = {GeneWebEx: Gene Annotation Web Extraction, Aggregation, and Updating
from Web-Based Biomolecular Databanks},
booktitle = {4th {IEEE} International Symposium on BioInformatics and BioEngineering
{(BIBE} 2004), 19-21 March 2004, Taichung, Taiwan},
pages = {199--206},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/BIBE.2004.1317343},
doi = {10.1109/BIBE.2004.1317343},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/MasseroliSMAP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MasseroliCPA03,
author = {Marco Masseroli and
Pietro Cerveri and
Pier Giuseppe Pelicci and
Myriam Alcalay},
title = {{GAAS:} Gene Array Analyzer Software for management, analysis and
visualization of gene expression data},
journal = {Bioinform.},
volume = {19},
number = {6},
pages = {774--775},
year = {2003},
url = {https://doi.org/10.1093/bioinformatics/btg071},
doi = {10.1093/BIOINFORMATICS/BTG071},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MasseroliCPA03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/te/PinciroliMT03,
author = {Francesco Pinciroli and
Marco Masseroli and
Gabriella Tognola},
title = {The educational offer in Medical Informatics and Telemedicine at the
Engineering Faculty of the Politecnico di Milano},
journal = {{IEEE} Trans. Educ.},
volume = {46},
number = {3},
pages = {394--398},
year = {2003},
url = {https://doi.org/10.1109/TE.2003.815235},
doi = {10.1109/TE.2003.815235},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/te/PinciroliMT03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BonacinaMMQP03,
author = {Stefano Bonacina and
Marco Masseroli and
Francesco Menegoni and
Giorgio Quattrone and
Francesco Pinciroli},
title = {A Colorimetric Characterization of the Raw Digital Data of the Visible
Human Dataset Images},
booktitle = {{AMIA} 2003, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 8-12, 2003},
publisher = {{AMIA}},
year = {2003},
url = {https://knowledge.amia.org/amia-55142-a2003a-1.616734/t-002-1.618748/f-001-1.618749/a-176-1.619563/a-177-1.619560},
timestamp = {Wed, 17 Apr 2024 11:48:28 +0200},
biburl = {https://dblp.org/rec/conf/amia/BonacinaMMQP03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MasseroliCPA02,
author = {Marco Masseroli and
Pietro Cerveri and
Pier Giuseppe Pelicci and
Myriam Alcalay},
title = {A Database-based Application for Management and Statistical Analysis
of High-throughput Gene Expression Data},
booktitle = {{AMIA} 2002, American Medical Informatics Association Annual Symposium,
San Antonio, TX, USA, November 9-13, 2002},
publisher = {{AMIA}},
year = {2002},
url = {https://knowledge.amia.org/amia-55142-a2002a-1.610020/t-002-1.611916/f-001-1.611917/a-332-1.612248/a-333-1.612245},
timestamp = {Wed, 17 Apr 2024 11:48:33 +0200},
biburl = {https://dblp.org/rec/conf/amia/MasseroliCPA02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/StellaMAP02,
author = {Andrea Stella and
Marco Masseroli and
Myriam Alcalay and
Francesco Pinciroli},
title = {Software Agents for Extracting, Aggregating, and Updating Data from
Web Pages of Genomic Databanks},
booktitle = {{AMIA} 2002, American Medical Informatics Association Annual Symposium,
San Antonio, TX, USA, November 9-13, 2002},
publisher = {{AMIA}},
year = {2002},
url = {https://knowledge.amia.org/amia-55142-a2002a-1.610020/t-002-1.611916/f-001-1.611917/a-403-1.612034/a-404-1.612031},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/StellaMAP02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/FerrarioMP01,
author = {Federico Ferrario and
Marco Masseroli and
Francesco Pinciroli},
title = {Use of Web Server-Side Technologies for Making the Most of the Hardware
Variety in Hospital Information Systems},
booktitle = {{AMIA} 2001, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 3-7, 2001},
publisher = {{AMIA}},
year = {2001},
url = {https://knowledge.amia.org/amia-55142-a2001a-1.597057/t-002-1.598852/f-001-1.598853/a-261-1.599353/a-262-1.599350},
timestamp = {Wed, 17 Apr 2024 11:48:39 +0200},
biburl = {https://dblp.org/rec/conf/amia/FerrarioMP01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/MasseroliP01,
author = {Marco Masseroli and
Francesco Pinciroli},
editor = {Vimla L. Patel and
Ray Rogers and
Reinhold Haux},
title = {Web Architecture for the Remote Browsing and Analysis of Distributed
Medical Images and Data},
booktitle = {{MEDINFO} 2001 - Proceedings of the 10th World Congress on Medical
Informatics, September 2-5, 2001, London, {UK}},
series = {Studies in Health Technology and Informatics},
volume = {84},
pages = {43--47},
publisher = {{IOS} Press},
year = {2001},
url = {https://doi.org/10.3233/978-1-60750-928-8-43},
doi = {10.3233/978-1-60750-928-8-43},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/MasseroliP01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/CerveriMP00,
author = {Pietro Cerveri and
Marco Masseroli and
Francesco Pinciroli},
title = {Remote access to anatomical information: an integration between semantic
knowledge and visual data},
booktitle = {{AMIA} 2000, American Medical Informatics Association Annual Symposium,
Los Angeles, CA, USA, November 4-8, 2000},
publisher = {{AMIA}},
year = {2000},
url = {https://knowledge.amia.org/amia-55142-a2000a-1.606968/t-001-1.609408/f-001-1.609409/a-025-1.609902/a-026-1.609899},
timestamp = {Wed, 17 Apr 2024 11:48:44 +0200},
biburl = {https://dblp.org/rec/conf/amia/CerveriMP00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MasseroliCP00,
author = {Marco Masseroli and
Pietro Cerveri and
Francesco Pinciroli},
title = {Java Technology and BioImages: Towards Remote High Quality Medical
Imaging},
booktitle = {{AMIA} 2000, American Medical Informatics Association Annual Symposium,
Los Angeles, CA, USA, November 4-8, 2000},
publisher = {{AMIA}},
year = {2000},
url = {https://knowledge.amia.org/amia-55142-a2000a-1.606968/t-002-1.608710/f-001-1.608711/a-331-1.608980/a-332-1.608977},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/MasseroliCP00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MasseroliCP00a,
author = {Marco Masseroli and
Pietro Cerveri and
Francesco Pinciroli},
title = {Software Agents and Java Technology for Cardiology Data Retrieval
and Visualization},
booktitle = {{AMIA} 2000, American Medical Informatics Association Annual Symposium,
Los Angeles, CA, USA, November 4-8, 2000},
publisher = {{AMIA}},
year = {2000},
url = {https://knowledge.amia.org/amia-55142-a2000a-1.606968/t-002-1.608710/f-001-1.608711/a-332-1.608977/a-333-1.608974},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/MasseroliCP00a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/euromicro/CerveriMP00,
author = {Pietro Cerveri and
Marco Masseroli and
Francesco Pinciroli},
title = {Java Interface to Human Anatomy Knowledge},
booktitle = {26th {EUROMICRO} 2000 Conference, Informatics: Inventing the Future,
5-7 September 2000, Maastricht, The Netherlands},
pages = {2384},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/EURMIC.2000.874511},
doi = {10.1109/EURMIC.2000.874511},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/euromicro/CerveriMP00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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