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ORCIDBibTeX records: Maria J. Schilstra
@inproceedings{DBLP:conf/alife/AbdelmotalebDSS14,
author = {Ahmed Abdelmotaleb and
Neil Davey and
Maria J. Schilstra and
Volker Steuber and
Borys Wr{\'{o}}bel},
title = {volving Spiking Neural Networks for Temporal Pattern Recognition in
the Presence of Noise},
booktitle = {Fourteenth International Conference on the Simulation and Synthesis
of Living Systems, {ALIFE} 2014, New York, NY, USA, July 30 - August
2, 2014},
pages = {965--972},
publisher = {{MIT} Press},
year = {2014},
url = {https://doi.org/10.7551/978-0-262-32621-6-ch157},
doi = {10.7551/978-0-262-32621-6-CH157},
timestamp = {Sun, 17 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alife/AbdelmotalebDSS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biosystems/DiniNES13,
author = {Paolo Dini and
Chrystopher L. Nehaniv and
Attila Egri{-}Nagy and
Maria J. Schilstra},
title = {Exploring the concept of interaction computing through the discrete
algebraic analysis of the Belousov-Zhabotinsky reaction},
journal = {Biosyst.},
volume = {112},
number = {2},
pages = {145--162},
year = {2013},
url = {https://doi.org/10.1016/j.biosystems.2013.03.003},
doi = {10.1016/J.BIOSYSTEMS.2013.03.003},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biosystems/DiniNES13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijuc/DiniNESSPHM12,
author = {Paolo Dini and
Chrystopher L. Nehaniv and
Attila Egri{-}Nagy and
Maria J. Schilstra and
Daniel Schreckling and
Joachim Posegga and
G{\'{a}}bor Horv{\'{a}}th and
Alastair J. Munro},
title = {{BIOMICS} Project: Biological and Mathematical Basis of Interaction
Computing},
journal = {Int. J. Unconv. Comput.},
volume = {8},
number = {4},
pages = {283--287},
year = {2012},
url = {http://www.oldcitypublishing.com/journals/ijuc-home/ijuc-issue-contents/ijuc-volume-8-number-4-2012/ijuc-8-4-p-283-287/},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijuc/DiniNESSPHM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipcat/PintoSS12,
author = {Thiago M. Pinto and
Maria J. Schilstra and
Volker Steuber},
editor = {Michael A. Lones and
Stephen L. Smith and
Sarah A. Teichmann and
Felix Naef and
James Alfred Walker and
Martin Trefzer},
title = {The Effective Calcium/Calmodulin Concentration Determines the Sensitivity
of CaMKII to the Frequency of Calcium Oscillations},
booktitle = {Information Processign in Cells and Tissues - 9th International Conference,
{IPCAT} 2012, Cambridge, UK, March 31 - April 2, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7223},
pages = {131--135},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-28792-3\_17},
doi = {10.1007/978-3-642-28792-3\_17},
timestamp = {Thu, 23 Jun 2022 19:59:03 +0200},
biburl = {https://dblp.org/rec/conf/ipcat/PintoSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipcat/DiniNES12,
author = {Paolo Dini and
Chrystopher L. Nehaniv and
Attila Egri{-}Nagy and
Maria J. Schilstra},
editor = {Michael A. Lones and
Stephen L. Smith and
Sarah A. Teichmann and
Felix Naef and
James Alfred Walker and
Martin Trefzer},
title = {Algebraic Analysis of the Computation in the Belousov-Zhabotinksy
Reaction},
booktitle = {Information Processign in Cells and Tissues - 9th International Conference,
{IPCAT} 2012, Cambridge, UK, March 31 - April 2, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7223},
pages = {216--224},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-28792-3\_27},
doi = {10.1007/978-3-642-28792-3\_27},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipcat/DiniNES12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biosystems/SchilstraN10,
author = {Maria J. Schilstra and
Chrystopher L. Nehaniv},
title = {Stochastic model of template-directed elongation processes in biology},
journal = {Biosyst.},
volume = {102},
number = {1},
pages = {55--60},
year = {2010},
url = {https://doi.org/10.1016/j.biosystems.2010.07.006},
doi = {10.1016/J.BIOSYSTEMS.2010.07.006},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biosystems/SchilstraN10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/opaals/Egri-NagyDNS10,
author = {Attila Egri{-}Nagy and
Paolo Dini and
Chrystopher L. Nehaniv and
Maria J. Schilstra},
editor = {Fernando Antonio Basile Colugnati and
Lia Carrari Rodrigues Lopes and
Saulo Faria Almeida Barretto},
title = {Transformation Semigroups as Constructive Dynamical Spaces},
booktitle = {Digital Ecosystems - Third International Conference, {OPAALS} 2010,
Aracuju, Sergipe, Brazil, March 22-23, 2010, Revised Selected Papers},
series = {Lecture Notes of the Institute for Computer Sciences, Social Informatics
and Telecommunications Engineering},
volume = {67},
pages = {245--265},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-14859-0\_19},
doi = {10.1007/978-3-642-14859-0\_19},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/opaals/Egri-NagyDNS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/alife/SchilstraN08,
author = {Maria J. Schilstra and
Chrystopher L. Nehaniv},
title = {Bio-Logic: Gene Expression and the Laws of Combinatorial Logic},
journal = {Artif. Life},
volume = {14},
number = {1},
pages = {121--133},
year = {2008},
url = {https://doi.org/10.1162/artl.2008.14.1.121},
doi = {10.1162/ARTL.2008.14.1.121},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/alife/SchilstraN08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/alife/KnabeNS08,
author = {Johannes F. Knabe and
Chrystopher L. Nehaniv and
Maria J. Schilstra},
title = {Genetic Regulatory Network Models of Biological Clocks: Evolutionary
History Matters},
journal = {Artif. Life},
volume = {14},
number = {1},
pages = {135--148},
year = {2008},
url = {https://doi.org/10.1162/artl.2008.14.1.135},
doi = {10.1162/ARTL.2008.14.1.135},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/alife/KnabeNS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biosystems/KnabeNS08,
author = {Johannes F. Knabe and
Chrystopher L. Nehaniv and
Maria J. Schilstra},
title = {Do motifs reflect evolved function? - No convergent evolution of genetic
regulatory network subgraph topologies},
journal = {Biosyst.},
volume = {94},
number = {1-2},
pages = {68--74},
year = {2008},
url = {https://doi.org/10.1016/j.biosystems.2008.05.012},
doi = {10.1016/J.BIOSYSTEMS.2008.05.012},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biosystems/KnabeNS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biosystems/Egri-NagyNRS08,
author = {Attila Egri{-}Nagy and
Chrystopher L. Nehaniv and
John L. Rhodes and
Maria J. Schilstra},
title = {Automatic analysis of computation in biochemical reactions},
journal = {Biosyst.},
volume = {94},
number = {1-2},
pages = {126--134},
year = {2008},
url = {https://doi.org/10.1016/j.biosystems.2008.05.018},
doi = {10.1016/J.BIOSYSTEMS.2008.05.018},
timestamp = {Thu, 29 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biosystems/Egri-NagyNRS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alife/KnabeSN08,
author = {Johannes F. Knabe and
Maria J. Schilstra and
Chrystopher L. Nehaniv},
editor = {Seth Bullock and
Jason Noble and
Richard A. Watson and
Mark A. Bedau},
title = {Evolution and Morphogenesis of Differentiated Multicellular Organisms
- Autonomously Generated Diffusion Gradients for Positional Information},
booktitle = {Proceedings of the Eleventh International Conference on the Synthesis
and Simulation of Living Systems, {ALIFE} 2008, Winchester, United
Kingdom, August 5-8, 2008},
pages = {321--328},
publisher = {{MIT} Press},
year = {2008},
url = {http://mitpress2.mit.edu/books/chapters/0262287196chap42.pdf},
timestamp = {Sun, 03 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alife/KnabeSN08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cec/KnabeNS08,
author = {Johannes F. Knabe and
Chrystopher L. Nehaniv and
Maria J. Schilstra},
title = {Regulation of gene regulation - smooth binding with dynamic affinity
affects evolvability},
booktitle = {Proceedings of the {IEEE} Congress on Evolutionary Computation, {CEC}
2008, June 1-6, 2008, Hong Kong, China},
pages = {890--896},
publisher = {{IEEE}},
year = {2008},
url = {https://doi.org/10.1109/CEC.2008.4630901},
doi = {10.1109/CEC.2008.4630901},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cec/KnabeNS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/WegnerKRESN07,
author = {Katja Wegner and
Johannes F. Knabe and
Mark Robinson and
Attila Egri{-}Nagy and
Maria J. Schilstra and
Chrystopher L. Nehaniv},
title = {The NetBuilder' project: development of a tool for constructing, simulating,
evolving, and analysing complex regulatory networks},
journal = {{BMC} Syst. Biol.},
volume = {1},
number = {{S-1}},
pages = {P72},
year = {2007},
url = {https://doi.org/10.1186/1752-0509-1-S1-P72},
doi = {10.1186/1752-0509-1-S1-P72},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/WegnerKRESN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ieeealife/KnabeNS07,
author = {Johannes F. Knabe and
Chrystopher L. Nehaniv and
Maria J. Schilstra},
title = {The Essential Motif that wasn't there: Topological and Lesioning Analysis
of Evolved Genetic Regulatory Networks},
booktitle = {First {IEEE} Symposium on Artificial Life, {ALIFE} 2007, Honolulu,
Hawaii, USA, April 1-5, 2007},
pages = {69--76},
publisher = {{IEEE}},
year = {2007},
url = {https://doi.org/10.1109/ALIFE.2007.367780},
doi = {10.1109/ALIFE.2007.367780},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ieeealife/KnabeNS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchilstraLMFHN06,
author = {Maria J. Schilstra and
Lu Li and
Joanne Matthews and
Andrew Finney and
Michael Hucka and
Nicolas Le Nov{\`{e}}re},
title = {CellML2SBML: conversion of CellML into {SBML}},
journal = {Bioinform.},
volume = {22},
number = {8},
pages = {1018--1020},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl047},
doi = {10.1093/BIOINFORMATICS/BTL047},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchilstraLMFHN06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NovereBBCDDLSSSSH06,
author = {Nicolas Le Nov{\`{e}}re and
Benjamin J. Bornstein and
Alexander Broicher and
M{\'{e}}lanie Courtot and
Marco Donizelli and
Harish Dharuri and
Lu Li and
Herbert M. Sauro and
Maria J. Schilstra and
Bruce E. Shapiro and
Jacky L. Snoep and
Michael Hucka},
title = {BioModels Database: a free, centralized database of curated, published,
quantitative kinetic models of biochemical and cellular systems},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Database-Issue},
pages = {689--691},
year = {2006},
url = {https://doi.org/10.1093/nar/gkj092},
doi = {10.1093/NAR/GKJ092},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NovereBBCDDLSSSSH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/SchilstraRAB02,
author = {Maria J. Schilstra and
Alistair G. Rust and
Rod Adams and
Hamid Bolouri},
title = {A finite state automaton model for multi-neuron simulations},
journal = {Neurocomputing},
volume = {44-46},
pages = {1141--1148},
year = {2002},
url = {https://doi.org/10.1016/S0925-2312(02)00438-1},
doi = {10.1016/S0925-2312(02)00438-1},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijon/SchilstraRAB02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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