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ORCIDBibTeX records: Malika Smaïl-Tabbone
@article{DBLP:journals/bmcbi/KravchenkoVSB24,
author = {Anna Kravchenko and
Sjoerd Jacob de Vries and
Malika Sma{\"{\i}}l{-}Tabbone and
Isaure Chauvot de Beauch{\^{e}}ne},
title = {{HIPPO:} HIstogram-based Pseudo-POtential for scoring protein-ssRNA
fragment-based docking poses},
journal = {{BMC} Bioinform.},
volume = {25},
number = {1},
pages = {129},
year = {2024},
url = {https://doi.org/10.1186/s12859-024-05733-6},
doi = {10.1186/S12859-024-05733-6},
timestamp = {Tue, 02 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KravchenkoVSB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ans/VaginayBS22,
author = {Ath{\'{e}}na{\"{\i}}s Vaginay and
Taha Boukhobza and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {From quantitative {SBML} models to Boolean networks},
journal = {Appl. Netw. Sci.},
volume = {7},
number = {1},
pages = {73},
year = {2022},
url = {https://doi.org/10.1007/s41109-022-00505-8},
doi = {10.1007/S41109-022-00505-8},
timestamp = {Mon, 14 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ans/VaginayBS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/BressoFGKPRZDS22,
author = {Emmanuel Bresso and
Joao{-}Pedro Ferreira and
Nicolas Girerd and
Masatake Kobayashi and
Gr{\'{e}}goire Preud'homme and
Patrick Rossignol and
Fayez Zannad and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {Inductive database to support iterative data mining: Application to
biomarker analysis on patient data in the Fight-HF project},
journal = {J. Biomed. Informatics},
volume = {135},
pages = {104212},
year = {2022},
url = {https://doi.org/10.1016/j.jbi.2022.104212},
doi = {10.1016/J.JBI.2022.104212},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/BressoFGKPRZDS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kbs/VerasSAGMNDS22,
author = {Marcelo B. A. Veras and
Bishnu Sarker and
Sabeur Aridhi and
Jo{\~{a}}o P. P. Gomes and
Jos{\'{e}} A. F. de Mac{\^{e}}do and
Engelbert Mephu Nguifo and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {On the design of a similarity function for sparse binary data with
application on protein function annotation},
journal = {Knowl. Based Syst.},
volume = {238},
pages = {107863},
year = {2022},
url = {https://doi.org/10.1016/j.knosys.2021.107863},
doi = {10.1016/J.KNOSYS.2021.107863},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/kbs/VerasSAGMNDS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kbs/IslamAS22,
author = {Md. Kamrul Islam and
Sabeur Aridhi and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {Negative sampling and rule mining for explainable link prediction
in knowledge graphs},
journal = {Knowl. Based Syst.},
volume = {250},
pages = {109083},
year = {2022},
url = {https://doi.org/10.1016/j.knosys.2022.109083},
doi = {10.1016/J.KNOSYS.2022.109083},
timestamp = {Fri, 15 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/kbs/IslamAS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/BressoMBCNPSC21,
author = {Emmanuel Bresso and
Pierre Monnin and
C{\'{e}}dric Bousquet and
Fran{\c{c}}ois{-}{\'{E}}lie Calvier and
Ndeye Coumba Ndiaye and
Nadine Petitpain and
Malika Sma{\"{\i}}l{-}Tabbone and
Adrien Coulet},
title = {Investigating {ADR} mechanisms with Explainable {AI:} a feasibility
study with knowledge graph mining},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {21},
number = {1},
pages = {171},
year = {2021},
url = {https://doi.org/10.1186/s12911-021-01518-6},
doi = {10.1186/S12911-021-01518-6},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/BressoMBCNPSC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/complexnetworks/IslamAS21,
author = {Md. Kamrul Islam and
Sabeur Aridhi and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Rosa Mar{\'{\i}}a Benito and
Chantal Cherifi and
Hocine Cherifi and
Esteban Moro and
Luis M. Rocha and
Marta Sales{-}Pardo},
title = {Simple Negative Sampling for Link Prediction in Knowledge Graphs},
booktitle = {Complex Networks {\&} Their Applications {X} - Volume 2, Proceedings
of the Tenth International Conference on Complex Networks and Their
Applications {COMPLEX} {NETWORKS} 2021, Madrid, Spain, November 30
- December 2, 2021},
series = {Studies in Computational Intelligence},
volume = {1016},
pages = {549--562},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-93413-2\_46},
doi = {10.1007/978-3-030-93413-2\_46},
timestamp = {Mon, 26 Jun 2023 20:46:27 +0200},
biburl = {https://dblp.org/rec/conf/complexnetworks/IslamAS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/complexnetworks/VaginayBS21,
author = {Ath{\'{e}}na{\"{\i}}s Vaginay and
Taha Boukhobza and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Rosa Mar{\'{\i}}a Benito and
Chantal Cherifi and
Hocine Cherifi and
Esteban Moro and
Luis M. Rocha and
Marta Sales{-}Pardo},
title = {From Quantitative {SBML} Models to Boolean Networks},
booktitle = {Complex Networks {\&} Their Applications {X} - Volume 2, Proceedings
of the Tenth International Conference on Complex Networks and Their
Applications {COMPLEX} {NETWORKS} 2021, Madrid, Spain, November 30
- December 2, 2021},
series = {Studies in Computational Intelligence},
volume = {1016},
pages = {676--687},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-93413-2\_56},
doi = {10.1007/978-3-030-93413-2\_56},
timestamp = {Wed, 12 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/complexnetworks/VaginayBS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ola/VaginayBS21,
author = {Ath{\'{e}}na{\"{\i}}s Vaginay and
Taha Boukhobza and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Bernab{\'{e}} Dorronsoro and
Lionel Amodeo and
Mario Pavone and
Patricia Ruiz},
title = {Automatic Synthesis of Boolean Networks from Biological Knowledge
and Data},
booktitle = {Optimization and Learning - 4th International Conference, {OLA} 2021,
Catania, Italy, June 21-23, 2021, Proceedings},
series = {Communications in Computer and Information Science},
volume = {1443},
pages = {156--170},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-85672-4\_12},
doi = {10.1007/978-3-030-85672-4\_12},
timestamp = {Wed, 01 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ola/VaginayBS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijdsa/DalleauCS20,
author = {Kevin Dalleau and
Miguel Couceiro and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {Unsupervised extra trees: a stochastic approach to compute similarities
in heterogeneous data},
journal = {Int. J. Data Sci. Anal.},
volume = {9},
number = {4},
pages = {447--459},
year = {2020},
url = {https://doi.org/10.1007/s41060-020-00214-4},
doi = {10.1007/S41060-020-00214-4},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijdsa/DalleauCS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/algos/MonninBCSNC20,
author = {Pierre Monnin and
Emmanuel Bresso and
Miguel Couceiro and
Malika Sma{\"{\i}}l{-}Tabbone and
Amedeo Napoli and
Adrien Coulet},
editor = {Miguel Couceiro and
Pierre Monnin and
Amedeo Napoli},
title = {Tackling scalability issues in mining path patterns from knowledge
graphs: a preliminary study},
booktitle = {Proceedings of the First International Conference "Algebras, graphs
and ordered sets", {ALGOS} 2020, Online (originally planned in Nancy,
France), August 26-28, 2020},
series = {{CEUR} Workshop Proceedings},
volume = {2925},
pages = {123--137},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2925/paper5.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:18 +0100},
biburl = {https://dblp.org/rec/conf/algos/MonninBCSNC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ida/DalleauCS20,
author = {Kevin Dalleau and
Miguel Couceiro and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Michael R. Berthold and
Ad Feelders and
Georg Krempl},
title = {Computing Vertex-Vertex Dissimilarities Using Random Trees: Application
to Clustering in Graphs},
booktitle = {Advances in Intelligent Data Analysis {XVIII} - 18th International
Symposium on Intelligent Data Analysis, {IDA} 2020, Konstanz, Germany,
April 27-29, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12080},
pages = {132--144},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-44584-3\_11},
doi = {10.1007/978-3-030-44584-3\_11},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ida/DalleauCS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2007-08821,
author = {Pierre Monnin and
Emmanuel Bresso and
Miguel Couceiro and
Malika Sma{\"{\i}}l{-}Tabbone and
Amedeo Napoli and
Adrien Coulet},
title = {Tackling scalability issues in mining path patterns from knowledge
graphs: a preliminary study},
journal = {CoRR},
volume = {abs/2007.08821},
year = {2020},
url = {https://arxiv.org/abs/2007.08821},
eprinttype = {arXiv},
eprint = {2007.08821},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2007-08821.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-08879,
author = {Md. Kamrul Islam and
Sabeur Aridhi and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {A comparative study of similarity-based and GNN-based link prediction
approaches},
journal = {CoRR},
volume = {abs/2008.08879},
year = {2020},
url = {https://arxiv.org/abs/2008.08879},
eprinttype = {arXiv},
eprint = {2008.08879},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2008-08879.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2012-09077,
author = {Emmanuel Bresso and
Pierre Monnin and
C{\'{e}}dric Bousquet and
Fran{\c{c}}ois{-}{\'{E}}lie Calvier and
Ndeye Coumba Ndiaye and
Nadine Petitpain and
Malika Sma{\"{\i}}l{-}Tabbone and
Adrien Coulet},
title = {Investigating {ADR} mechanisms with knowledge graph mining and explainable
{AI}},
journal = {CoRR},
volume = {abs/2012.09077},
year = {2020},
url = {https://arxiv.org/abs/2012.09077},
eprinttype = {arXiv},
eprint = {2012.09077},
timestamp = {Sat, 02 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2012-09077.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/f-egc/DalleauCS19,
author = {Kevin Dalleau and
Miguel Couceiro and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Marie{-}Christine Rousset and
Lydia Boudjeloud{-}Assala},
title = {Les for{\^{e}}ts d'arbres extr{\^{e}}mement al{\'{e}}atoires
: utilisation dans un cadre non supervis{\'{e}}},
booktitle = {Extraction et Gestion des connaissances, {EGC} 2019, Metz, France,
January 21-25, 2019},
series = {{RNTI}},
volume = {{E-35}},
pages = {395--400},
publisher = {{\'{E}}ditions {RNTI}},
year = {2019},
url = {http://editions-rnti.fr/?inprocid=1002520},
timestamp = {Tue, 26 Nov 2019 17:09:48 +0100},
biburl = {https://dblp.org/rec/conf/f-egc/DalleauCS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/f-egc/PerDS18,
author = {Yelen Per and
Kevin Dalleau and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Mustapha Lebbah and
Christine Largeron and
Hanane Azzag},
title = {Exploration et analyses multi-objectifs de s{\'{e}}ries temporelles
de donn{\'{e}}es m{\'{e}}t{\'{e}}orologiques},
booktitle = {Extraction et Gestion des Connaissances, {EGC} 2018, Paris, France,
January 23-26, 2018},
series = {{RNTI}},
volume = {{E-34}},
pages = {427--438},
publisher = {{\'{E}}ditions {RNTI}},
year = {2018},
url = {http://editions-rnti.fr/?inprocid=1002421},
timestamp = {Tue, 26 Nov 2019 17:09:42 +0100},
biburl = {https://dblp.org/rec/conf/f-egc/PerDS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/DalleauCS18,
author = {Kevin Dalleau and
Miguel Couceiro and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Dinh Q. Phung and
Vincent S. Tseng and
Geoffrey I. Webb and
Bao Ho and
Mohadeseh Ganji and
Lida Rashidi},
title = {Unsupervised Extremely Randomized Trees},
booktitle = {Advances in Knowledge Discovery and Data Mining - 22nd Pacific-Asia
Conference, {PAKDD} 2018, Melbourne, VIC, Australia, June 3-6, 2018,
Proceedings, Part {III}},
series = {Lecture Notes in Computer Science},
volume = {10939},
pages = {478--489},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-93040-4\_38},
doi = {10.1007/978-3-319-93040-4\_38},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/pakdd/DalleauCS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/PersoneniDSJBC18,
author = {Gabin Personeni and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone and
Philippe Jonveaux and
C{\'{e}}line Bonnet and
Adrien Coulet},
editor = {Andra Waagmeester and
Christopher J. O. Baker and
Andrea Splendiani and
Oya Deniz Beyan and
M. Scott Marshall},
title = {Cooperation of bio-ontologies for the classification of genetic intellectual
disabilities : a diseasome approach},
booktitle = {Proceedings of the 11th International Conference Semantic Web Applications
and Tools for Life Sciences, {SWAT4LS} 2018, Antwerp, Belgium, December
3-6, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2275},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2275/paper10.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:03 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/PersoneniDSJBC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/PersoneniBDDSC17,
author = {Gabin Personeni and
Emmanuel Bresso and
Marie{-}Dominique Devignes and
Michel Dumontier and
Malika Sma{\"{\i}}l{-}Tabbone and
Adrien Coulet},
title = {Discovering associations between adverse drug events using pattern
structures and ontologies},
journal = {J. Biomed. Semant.},
volume = {8},
number = {1},
pages = {29:1--29:13},
year = {2017},
url = {https://doi.org/10.1186/s13326-017-0137-x},
doi = {10.1186/S13326-017-0137-X},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/PersoneniBDDSC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/f-egc/PerDS17,
author = {Yelen Per and
Kevin Dalleau and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Fabien Gandon and
Gilles Bisson},
title = {Pr{\'{e}}diction de d{\'{e}}fauts dans les arbres du parc
v{\'{e}}g{\'{e}}tal Grenoblois et pr{\'{e}}conisations
pour les futures plantations},
booktitle = {17{\`{e}}me Journ{\'{e}}es Francophones Extraction et Gestion
des Connaissances, {EGC} 2017, 24-27 Janvier 2017, Grenoble, France},
series = {{RNTI}},
volume = {{E-33}},
pages = {237--248},
publisher = {{\'{E}}ditions {RNTI}},
year = {2017},
url = {http://editions-rnti.fr/?inprocid=1002284},
timestamp = {Fri, 16 Apr 2021 10:04:12 +0200},
biburl = {https://dblp.org/rec/conf/f-egc/PerDS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1708-07074,
author = {Sabeur Aridhi and
Seyed Ziaeddin Alborzi and
Malika Sma{\"{\i}}l{-}Tabbone and
Marie{-}Dominique Devignes and
David W. Ritchie},
title = {Neighborhood-Based Label Propagation in Large Protein Graphs},
journal = {CoRR},
volume = {abs/1708.07074},
year = {2017},
url = {http://arxiv.org/abs/1708.07074},
eprinttype = {arXiv},
eprint = {1708.07074},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1708-07074.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ercim/CouletS16,
author = {Adrien Coulet and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {Mining Electronic Health Records to Validate Knowledge in Pharmacogenomics},
journal = {{ERCIM} News},
volume = {2016},
number = {104},
year = {2016},
url = {http://ercim-news.ercim.eu/en104/special/mining-electronic-health-records-to-validate-knowledge-in-pharmacogenomics},
timestamp = {Wed, 22 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ercim/CouletS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ercim/DevignesSR16,
author = {Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone and
David W. Ritchie},
title = {Kbdock - Searching and Organising the Structural Space of Protein-Protein
Interactions},
journal = {{ERCIM} News},
volume = {2016},
number = {104},
year = {2016},
url = {http://ercim-news.ercim.eu/en104/special/kbdock-searching-and-organising-the-structural-space-of-protein-protein-interactions},
timestamp = {Wed, 22 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ercim/DevignesSR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:books/hal/SmailTabbone14,
author = {Malika Sma{\"{\i}}l{-}Tabbone},
title = {Contributions {\`{a}} l'extraction de connaissances {\`{a}} partir
de donn{\'{e}}es biologiques. (Contribution to knowledge extraction
from biological data)},
year = {2014},
url = {https://tel.archives-ouvertes.fr/tel-01093943},
timestamp = {Sat, 30 Sep 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/hal/SmailTabbone14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GhoorahDSR14,
author = {Anisah W. Ghoorah and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone and
David W. Ritchie},
title = {{KBDOCK} 2013: a spatial classification of 3D protein domain family
interactions},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {389--395},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt1199},
doi = {10.1093/NAR/GKT1199},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GhoorahDSR14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dils/PersoneniDBJDSC14,
author = {Gabin Personeni and
Simon Daget and
C{\'{e}}line Bonnet and
Philippe Jonveaux and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone and
Adrien Coulet},
editor = {Helena Galhardas and
Erhard Rahm},
title = {Mining Linked Open Data: {A} Case Study with Genes Responsible for
Intellectual Disability},
booktitle = {Data Integration in the Life Sciences - 10th International Conference,
{DILS} 2014, Lisbon, Portugal, July 17-18, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8574},
pages = {16--31},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08590-6\_2},
doi = {10.1007/978-3-319-08590-6\_2},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dils/PersoneniDBJDSC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BressoGMKSDS13,
author = {Emmanuel Bresso and
Renaud Grisoni and
Gino Marchetti and
Arnaud Sinan Karaboga and
Michel Souchet and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {Integrative relational Machine-Learning Approach for Understanding
Drug Side-Effect Profiles},
journal = {{BMC} Bioinform.},
volume = {14},
pages = {207},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-207},
doi = {10.1186/1471-2105-14-207},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BressoGMKSDS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/coria/RachidSDT13,
author = {Rachid Hafiane and
Malika Sma{\"{\i}}l{-}Tabbone and
Marie{-}Dominique Devignes and
Salvatore Tabbone},
editor = {Catherine Berrut},
title = {Clustering optimal de g{\`{e}}nes fond{\'{e}} sur une mesure
de similarit{\'{e}} s{\'{e}}mantique},
booktitle = {{CORIA} 2013 - Conf{\'{e}}rence en Recherche d'Infomations et
Applications - 10th French Information Retrieval Conference, Neuch{\^{a}}tel,
Switzerland, April 3-5, 2013},
pages = {323--336},
publisher = {{UNINE}},
year = {2013},
url = {https://doi.org/10.24348/coria.2013.coria2013\_73},
doi = {10.24348/CORIA.2013.CORIA2013\_73},
timestamp = {Wed, 20 Jun 2018 17:08:38 +0200},
biburl = {https://dblp.org/rec/conf/coria/RachidSDT13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dmold/AlamCCNS13,
author = {Mehwish Alam and
Melisachew Wudage Chekol and
Adrien Coulet and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Claudia d'Amato and
Petr Berka and
Vojtech Sv{\'{a}}tek and
Krzysztof Wecel},
title = {Lattice Based Data Access {(LBDA):} An Approach for Organizing and
Accessing Linked Open Data in Biology},
booktitle = {Proceedings of the International Workshop on Data Mining on Linked
Data, with Linked Data Mining Challenge collocated with the European
Conference on Machine Learning and Principles and Practice of Knowledge
Discovery in Databases {(ECMLPKDD} 2013), Prague, Czech Republic,
September 23, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1082},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1082/paper5.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:57 +0100},
biburl = {https://dblp.org/rec/conf/dmold/AlamCCNS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcbdd/DevignesBSNP12,
author = {Marie{-}Dominique Devignes and
Sidahmed Benabderrahmane and
Malika Sma{\"{\i}}l{-}Tabbone and
Amedeo Napoli and
Olivier Poch},
title = {Functional classification of genes using semantic distance and fuzzy
clustering approach: evaluation with reference sets and overlap analysis},
journal = {Int. J. Comput. Biol. Drug Des.},
volume = {5},
number = {3/4},
pages = {245--260},
year = {2012},
url = {https://doi.org/10.1504/IJCBDD.2012.049207},
doi = {10.1504/IJCBDD.2012.049207},
timestamp = {Sat, 25 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijcbdd/DevignesBSNP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cla/AlamCNS12,
author = {Mehwish Alam and
Adrien Coulet and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Laszlo Szathmary and
Uta Priss},
title = {Formal Concept Analysis Applied to Transcriptomic Data},
booktitle = {Proceedings of The Ninth International Conference on Concept Lattices
and Their Applications, Fuengirola (M{\'{a}}laga), Spain, October
11-14, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {972},
pages = {339--344},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-972/paper\_short1.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:10 +0100},
biburl = {https://dblp.org/rec/conf/cla/AlamCNS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecai/AlamCNS12,
author = {Mehwish Alam and
Adrien Coulet and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Sergei O. Kuznetsov and
Amedeo Napoli and
Sebastian Rudolph},
title = {Formal Concept Analysis Applied to Transcriptomic Data},
booktitle = {Proceedings of the International Workshop "What can {FCA} do for Artificial
Intelligence?", FCA4AI@ECAI 2012, Montpellier, France, August 28,
2012},
series = {{CEUR} Workshop Proceedings},
volume = {939},
pages = {7--14},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-939/paper2.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:14 +0100},
biburl = {https://dblp.org/rec/conf/ecai/AlamCNS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ic3k/BressoGDNS12a,
author = {Emmanuel Bresso and
Renaud Grisoni and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Ana L. N. Fred and
Jan L. G. Dietz and
Kecheng Liu and
Joaquim Filipe},
title = {{ILP} Characterization of 3D Protein-Binding Sites and FCA-Based Interpretation},
booktitle = {Knowledge Discovery, Knowledge Engineering and Knowledge Management
- 4th International Joint Conference, {IC3K} 2012, Barcelona, Spain,
October 4-7, 2012, Revised Selected Papers},
series = {Communications in Computer and Information Science},
volume = {415},
pages = {84--100},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-54105-6\_6},
doi = {10.1007/978-3-642-54105-6\_6},
timestamp = {Sat, 19 Oct 2019 20:33:38 +0200},
biburl = {https://dblp.org/rec/conf/ic3k/BressoGDNS12a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ic3k/BressoGDNS12,
author = {Emmanuel Bresso and
Renaud Grisoni and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Ana L. N. Fred and
Joaquim Filipe},
title = {Formal Concept Analysis for the Interpretation of Relational Learning
Applied on 3D Protein-binding Sites},
booktitle = {{KDIR} 2012 - Proceedings of the International Conference on Knowledge
Discovery and Information Retrieval, Barcelona, Spain, 4 - 7 October,
2012},
pages = {111--120},
publisher = {SciTePress},
year = {2012},
timestamp = {Wed, 25 May 2016 10:19:57 +0200},
biburl = {https://dblp.org/rec/conf/ic3k/BressoGDNS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GhoorahDSR11,
author = {Anisah W. Ghoorah and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone and
David W. Ritchie},
title = {Spatial clustering of protein binding sites for template based protein
docking},
journal = {Bioinform.},
volume = {27},
number = {20},
pages = {2820--2827},
year = {2011},
url = {https://doi.org/10.1093/bioinformatics/btr493},
doi = {10.1093/BIOINFORMATICS/BTR493},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GhoorahDSR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/BenabderrahmaneDSNP11,
author = {Sidahmed Benabderrahmane and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone and
Amedeo Napoli and
Olivier Poch},
title = {Ontology-based functional classification of genes: Evaluation with
reference sets and overlap analysis},
booktitle = {2011 {IEEE} International Conference on Bioinformatics and Biomedicine
Workshops, {BIBMW} 2011, Atlanta, GA, USA, November 12-15, 2011},
pages = {201--208},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/BIBMW.2011.6112375},
doi = {10.1109/BIBMW.2011.6112375},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/BenabderrahmaneDSNP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ic3k/BressoBSMKSND11,
author = {Emmanuel Bresso and
Sidahmed Benabderrahmane and
Malika Sma{\"{\i}}l{-}Tabbone and
Gino Marchetti and
Arnaud Sinan Karaboga and
Michel Souchet and
Amedeo Napoli and
Marie{-}Dominique Devignes},
editor = {Joaquim Filipe and
Ana L. N. Fred},
title = {Use of Domain Knowledge for Dimension Reduction - Application to Mining
of Drug Side Effects},
booktitle = {{KDIR} 2011 - Proceedings of the International Conference on Knowledge
Discovery and Information Retrieval, Paris, France, 26-29 October,
2011},
pages = {271--276},
publisher = {SciTePress},
year = {2011},
timestamp = {Fri, 04 May 2012 14:53:05 +0200},
biburl = {https://dblp.org/rec/conf/ic3k/BressoBSMKSND11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BenabderrahmaneSPND10,
author = {Sidahmed Benabderrahmane and
Malika Sma{\"{\i}}l{-}Tabbone and
Olivier Poch and
Amedeo Napoli and
Marie{-}Dominique Devignes},
title = {IntelliGO: a new vector-based semantic similarity measure including
annotation origin},
journal = {{BMC} Bioinform.},
volume = {11},
pages = {588},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-588},
doi = {10.1186/1471-2105-11-588},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BenabderrahmaneSPND10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmso/DevignesFMBNS10,
author = {Marie{-}Dominique Devignes and
Philippe Franiatte and
Nizar Messai and
Emmanuel Bresso and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {BioRegistry: Automatic extraction of metadata for biological database
retrieval and discovery},
journal = {Int. J. Metadata Semant. Ontologies},
volume = {5},
number = {3},
pages = {184--193},
year = {2010},
url = {https://doi.org/10.1504/IJMSO.2010.034043},
doi = {10.1504/IJMSO.2010.034043},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijmso/DevignesFMBNS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/GhemtioDSSLM10,
author = {Leo Ghemtio and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone and
Michel Souchet and
Vincent Leroux and
Bernard Maigret},
title = {Comparison of Three Preprocessing Filters Efficiency in Virtual Screening:
Identification of New Putative LXR{\(\beta\)} Regulators As a Test
Case},
journal = {J. Chem. Inf. Model.},
volume = {50},
number = {5},
pages = {701--715},
year = {2010},
url = {https://doi.org/10.1021/ci900356m},
doi = {10.1021/CI900356M},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/GhemtioDSSLM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecai/MessaiDNS10,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Helder Coelho and
Rudi Studer and
Michael J. Wooldridge},
title = {Using Domain Knowledge to Guide Lattice-based Complex Data Exploration},
booktitle = {{ECAI} 2010 - 19th European Conference on Artificial Intelligence,
Lisbon, Portugal, August 16-20, 2010, Proceedings},
series = {Frontiers in Artificial Intelligence and Applications},
volume = {215},
pages = {847--852},
publisher = {{IOS} Press},
year = {2010},
url = {https://doi.org/10.3233/978-1-60750-606-5-847},
doi = {10.3233/978-1-60750-606-5-847},
timestamp = {Fri, 26 Apr 2019 14:26:43 +0200},
biburl = {https://dblp.org/rec/conf/ecai/MessaiDNS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/f-ic/MessaiDNS10,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Sylvie Despr{\`{e}}s},
title = {Connaissances de domaine et treillis de concepts pour l'exploration
progressive de donn{\'{e}}es complexes},
booktitle = {{IC} 2010 : 21es Journ{\'{e}}es Ing{\'{e}}nierie des Connaissances
2010 (Proceedings of the 21st French Knowledge Engineering Conference),
N{\^{\i}}mes, France, June 8-10, 2010},
pages = {233--244},
publisher = {Presse des Mines},
year = {2010},
timestamp = {Mon, 06 Feb 2017 15:27:52 +0100},
biburl = {https://dblp.org/rec/conf/f-ic/MessaiDNS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YilmazJBPSD09,
author = {Saliha Yilmaz and
Philippe Jonveaux and
Cedric Bicep and
Laurent Pierron and
Malika Sma{\"{\i}}l{-}Tabbone and
Marie{-}Dominique Devignes},
title = {Gene-disease relationship discovery based on model-driven data integration
and database view definition},
journal = {Bioinform.},
volume = {25},
number = {2},
pages = {230--236},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btn612},
doi = {10.1093/BIOINFORMATICS/BTN612},
timestamp = {Fri, 28 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YilmazJBPSD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ic3k/GhemtioSDSM09,
author = {Leo Ghemtio and
Malika Sma{\"{\i}}l{-}Tabbone and
Marie{-}Dominique Devignes and
Michel Souchet and
Bernard Maigret},
editor = {Ana L. N. Fred},
title = {A {KDD} Approach for Designing Filtering Strategies to Improve Virtual
Screening},
booktitle = {{KDIR} 2009 - Proceedings of the International Conference on Knowledge
Discovery and Information Retrieval, Funchal - Madeira, Portugal,
October 6-8, 2009},
pages = {146--151},
publisher = {{INSTICC} Press},
year = {2009},
timestamp = {Wed, 03 Mar 2010 13:33:37 +0100},
biburl = {https://dblp.org/rec/conf/ic3k/GhemtioSDSM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/inforsid/BenabderrahmaneDSNPNR09,
author = {Sidahmed Benabderrahmane and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone and
Amedeo Napoli and
Olivier Poch and
Ngoc{-}Hoan Nguyen and
Wolfgang Raffelsberger},
title = {Analyse de donn{\'{e}}es transcriptomiques: Mod{\'{e}}lisation
floue de profils d'expression diff{\'{e}}rentielle et analyse
fonctionnelle},
booktitle = {Actes du XXVII{\`{e}}me Congr{\`{e}}s INFORSID, Toulouse, France,
26-29 mai 2009},
pages = {413--428},
year = {2009},
timestamp = {Sat, 11 Oct 2014 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/inforsid/BenabderrahmaneDSNPNR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CouletSBND08,
author = {Adrien Coulet and
Malika Sma{\"{\i}}l{-}Tabbone and
Pascale Benlian and
Amedeo Napoli and
Marie{-}Dominique Devignes},
title = {Ontology-guided data preparation for discovering genotype-phenotype
relationships},
journal = {{BMC} Bioinform.},
volume = {9},
number = {{S-4}},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-S4-S3},
doi = {10.1186/1471-2105-9-S4-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CouletSBND08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dlog/CouletSND08,
author = {Adrien Coulet and
Malika Sma{\"{\i}}l{-}Tabbone and
Amedeo Napoli and
Marie{-}Dominique Devignes},
editor = {Franz Baader and
Carsten Lutz and
Boris Motik},
title = {Ontology Refinement through Role Assertion Analysis: Example in Pharmacogenomics},
booktitle = {Proceedings of the 21st International Workshop on Description Logics
(DL2008), Dresden, Germany, May 13-16, 2008},
series = {{CEUR} Workshop Proceedings},
volume = {353},
publisher = {CEUR-WS.org},
year = {2008},
url = {https://ceur-ws.org/Vol-353/CouletSmail-TabboneNapoliDevignes.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:16 +0100},
biburl = {https://dblp.org/rec/conf/dlog/CouletSND08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecai/MessaiDNS08,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Malik Ghallab and
Constantine D. Spyropoulos and
Nikos Fakotakis and
Nikolaos M. Avouris},
title = {Many-Valued Concept Lattices for Conceptual Clustering and Information
Retrieval},
booktitle = {{ECAI} 2008 - 18th European Conference on Artificial Intelligence,
Patras, Greece, July 21-25, 2008, Proceedings},
series = {Frontiers in Artificial Intelligence and Applications},
volume = {178},
pages = {127--131},
publisher = {{IOS} Press},
year = {2008},
url = {https://doi.org/10.3233/978-1-58603-891-5-127},
doi = {10.3233/978-1-58603-891-5-127},
timestamp = {Wed, 24 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ecai/MessaiDNS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccs/MessaiDNS08,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Peter W. Eklund and
Ollivier Haemmerl{\'{e}}},
title = {Extending Attribute Dependencies for Lattice-Based Querying and Navigation},
booktitle = {Conceptual Structures: Knowledge Visualization and Reasoning, 16th
International Conference on Conceptual Structures, {ICCS} 2008, Toulouse,
France, July 7-11, 2008, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5113},
pages = {189--202},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-70596-3\_13},
doi = {10.1007/978-3-540-70596-3\_13},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iccs/MessaiDNS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iiwas/DevignesFMNS08,
author = {Marie{-}Dominique Devignes and
Philippe Franiatte and
Nizar Messai and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Gabriele Kotsis and
David Taniar and
Eric Pardede and
Ismail Khalil Ibrahim},
title = {BioRegistry: automatic extraction of metadata for biological database
retrieval and discovery},
booktitle = {iiWAS'2008 - The Tenth International Conference on Information Integration
and Web-based Applications Services, 24-26 November 2008, Linz, Austria},
pages = {456--461},
publisher = {{ACM}},
year = {2008},
url = {https://doi.org/10.1145/1497308.1497392},
doi = {10.1145/1497308.1497392},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iiwas/DevignesFMNS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stairs/CouletSND08,
author = {Adrien Coulet and
Malika Sma{\"{\i}}l{-}Tabbone and
Amedeo Napoli and
Marie{-}Dominique Devignes},
editor = {Amedeo Cesta and
Nikos Fakotakis},
title = {Role Assertion Analysis: a proposed method for ontology refinement
through assertion learning},
booktitle = {{STAIRS} 2008 - Proceedings of the Fourth Starting {AI} Researchers'
Symposium, Patras, Greece, 21-25 July, 2008},
series = {Frontiers in Artificial Intelligence and Applications},
volume = {179},
pages = {47--58},
publisher = {{IOS} Press},
year = {2008},
url = {https://doi.org/10.3233/978-1-58603-893-9-47},
doi = {10.3233/978-1-58603-893-9-47},
timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/stairs/CouletSND08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/f-ic/MessaiDNS07,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Francky Trichet},
title = {Traitement d'attributs inter-d{\'{e}}pendants pour la recherche
d'information par treillis},
booktitle = {{IC} 2007: Ing{\'{e}}nierie des connaissances 2007 (Proceedings
of the 18th French Knowledge Engineering Conference), Grenoble, France,
July 4-6, 2007},
pages = {109--121},
publisher = {Cepadues},
year = {2007},
url = {http://www.irit.fr/GRACQ/article.php3?id\_article=227},
timestamp = {Fri, 16 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/f-ic/MessaiDNS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wise/DevignesS07,
author = {Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Mathias Weske and
Mohand{-}Said Hacid and
Claude Godart},
title = {Workshop {PC} Chairs' Message},
booktitle = {Web Information Systems Engineering - {WISE} 2007 Workshops, {WISE}
2007 International Workshops, Nancy, France, December 3, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4832},
pages = {3--4},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-77010-7\_1},
doi = {10.1007/978-3-540-77010-7\_1},
timestamp = {Tue, 14 May 2019 10:00:52 +0200},
biburl = {https://dblp.org/rec/conf/wise/DevignesS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isi/MessaiDNS06,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {Treillis de concepts et ontologies pour interroger l'annuaire de sources
de donn{\'{e}}es biologiques BioRegistry},
journal = {Ing{\'{e}}nierie des Syst{\`{e}}mes d Inf.},
volume = {11},
number = {1},
pages = {39--60},
year = {2006},
url = {https://doi.org/10.3166/isi.11.1.39-60},
doi = {10.3166/ISI.11.1.39-60},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isi/MessaiDNS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dils/CouletSBND06,
author = {Adrien Coulet and
Malika Sma{\"{\i}}l{-}Tabbone and
Pascale Benlian and
Amedeo Napoli and
Marie{-}Dominique Devignes},
editor = {Ulf Leser and
Felix Naumann and
Barbara A. Eckman},
title = {SNP-Converter: An Ontology-Based Solution to Reconcile Heterogeneous
{SNP} Descriptions for Pharmacogenomic Studies},
booktitle = {Data Integration in the Life Sciences, Third International Workshop,
{DILS} 2006, Hinxton, UK, July 20-22, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4075},
pages = {82--93},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11799511\_8},
doi = {10.1007/11799511\_8},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dils/CouletSBND06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/otm/CouletSND06,
author = {Adrien Coulet and
Malika Sma{\"{\i}}l{-}Tabbone and
Amedeo Napoli and
Marie{-}Dominique Devignes},
editor = {Robert Meersman and
Zahir Tari and
Pilar Herrero},
title = {Suggested Ontology for Pharmacogenomics (SO-Pharm): Modular Construction
and Preliminary Testing},
booktitle = {On the Move to Meaningful Internet Systems 2006: {OTM} 2006 Workshops,
{OTM} Confederated International Workshops and Posters, AWeSOMe, CAMS,
COMINF, IS, KSinBIT, MIOS-CIAO, MONET, OnToContent, ORM, PerSys, {OTM}
Academy Doctoral Consortium, RDDS, SWWS, and SeBGIS 2006, Montpellier,
France, October 29 - November 3, 2006. Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {4277},
pages = {648--657},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11915034\_89},
doi = {10.1007/11915034\_89},
timestamp = {Thu, 14 Oct 2021 10:28:26 +0200},
biburl = {https://dblp.org/rec/conf/otm/CouletSND06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/complife/Smail-TabboneOMND05,
author = {Malika Sma{\"{\i}}l{-}Tabbone and
Shazia Osman and
Nizar Messai and
Amedeo Napoli and
Marie{-}Dominique Devignes},
editor = {Michael R. Berthold and
Robert C. Glen and
Kay Diederichs and
Oliver Kohlbacher and
Ingrid Fischer},
title = {BioRegistry: {A} Structured Metadata Repository for Bioinformatic
Databases},
booktitle = {Computational Life Sciences, First International Symposium, CompLife
2005, Konstanz, Germany, September 25-27, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3695},
pages = {46--56},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11560500\_5},
doi = {10.1007/11560500\_5},
timestamp = {Tue, 14 May 2019 10:00:36 +0200},
biburl = {https://dblp.org/rec/conf/complife/Smail-TabboneOMND05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/f-egc/MessaiDNS05,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Jean{-}Marc Petit and
Nicole Vincent and
Florence Cloppet},
title = {M{\'{e}}thode s{\'{e}}mantique pour la classification et
l'iinterrogation de sources de donn{\'{e}}es biologiques},
booktitle = {Extraction des connaissances : Etat et perspectives (Ateliers de la
conf{\'{e}}rence EGC'2005)},
series = {{RNTI}},
volume = {{E-5}},
pages = {43--48},
publisher = {C{\'{e}}padu{\`{e}}s-{\'{E}}ditions},
year = {2005},
url = {http://editions-rnti.fr/?inprocid=1000213},
timestamp = {Sun, 27 Apr 2014 17:13:00 +0200},
biburl = {https://dblp.org/rec/conf/f-egc/MessaiDNS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccs/MessaiDNS05,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
editor = {Frithjof Dau and
Marie{-}Laure Mugnier and
Gerd Stumme},
title = {Querying a Bioinformatic Data Sources Registry with Concept Lattices},
booktitle = {Conceptual Structures: Common Semantics for Sharing Knowledge, 13th
International Conference on Conceptual Structures, {ICCS} 2005, Kassel,
Germany, July 17-22, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3596},
pages = {323--336},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11524564\_22},
doi = {10.1007/11524564\_22},
timestamp = {Tue, 14 May 2019 10:00:37 +0200},
biburl = {https://dblp.org/rec/conf/iccs/MessaiDNS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/inforsid/MessaiDNS05,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Amedeo Napoli and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {Treillis de concepts et ontologies pour l'interrogation d'un annuaire
de sources de donn{\'{e}}es biologiques (BioRegistry)},
booktitle = {Actes du XXIII{\`{e}}me Congr{\`{e}}s INFORSID, Grenoble, France,
24-27 mai, 2005},
pages = {587--602},
year = {2005},
timestamp = {Wed, 19 Apr 2006 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/inforsid/MessaiDNS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-cs-0506017,
author = {Nizar Messai and
Marie{-}Dominique Devignes and
Malika Sma{\"{\i}}l{-}Tabbone and
Amedeo Napoli},
title = {Treillis de concepts et ontologies pour l'interrogation d'un annuaire
de sources de donn{\'{e}}es biologiques (BioRegistry)},
journal = {CoRR},
volume = {abs/cs/0506017},
year = {2005},
url = {http://arxiv.org/abs/cs/0506017},
eprinttype = {arXiv},
eprint = {cs/0506017},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-cs-0506017.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isi/DevignesSS02,
author = {Marie{-}Dominique Devignes and
Andr{\'{e}} Schaaff and
Malika Sma{\"{\i}}l},
title = {Collecte et int{\'{e}}gration de donn{\'{e}}es biologiques
h{\'{e}}t{\'{e}}rog{\`{e}}nes sur le web},
journal = {Ing{\'{e}}nierie des Syst{\`{e}}mes d Inf.},
volume = {7},
number = {1-2},
pages = {45--61},
year = {2002},
url = {https://doi.org/10.3166/isi.7.1-2.45-61},
doi = {10.3166/ISI.7.1-2.45-61},
timestamp = {Wed, 16 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/isi/DevignesSS02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecir/DuffingS02,
author = {G{\'{e}}rald Duffing and
Malika Sma{\"{\i}}l},
editor = {Fabio Crestani and
Mark A. Girolami and
C. J. van Rijsbergen},
title = {Organising and Searching Partially Indexed Image Databases},
booktitle = {Advances in Information Retrieval, 24th {BCS-IRSG} European Colloquium
on {IR} Research Glasgow, UK, March 25-27, 2002 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2291},
pages = {22--40},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45886-7\_2},
doi = {10.1007/3-540-45886-7\_2},
timestamp = {Tue, 14 May 2019 10:00:37 +0200},
biburl = {https://dblp.org/rec/conf/ecir/DuffingS02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/visual/DuffingS00,
author = {G{\'{e}}rald Duffing and
Malika Sma{\"{\i}}l},
editor = {Robert Laurini},
title = {A Novel Approach for Accessing Partially Indexed Image Corpora},
booktitle = {Advances in Visual Information Systems, 4th International Conference,
{VISUAL} 2000, Lyon, France, November 2-4, 2000, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1929},
pages = {244--256},
publisher = {Springer},
year = {2000},
url = {https://doi.org/10.1007/3-540-40053-2\_22},
doi = {10.1007/3-540-40053-2\_22},
timestamp = {Tue, 14 May 2019 10:00:49 +0200},
biburl = {https://dblp.org/rec/conf/visual/DuffingS00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/inforsid/Smail99,
author = {Malika Sma{\"{\i}}l},
title = {Recherche de r{\'{e}}gularit{\'{e}}s dans un m{\'{e}}moire
de sessions de recherche d'information documentaire},
booktitle = {Actes du XVII{\`{e}}me Congr{\`{e}}s INFORSID, La Garde, France, 1-4
juin, 1999},
pages = {95--113},
year = {1999},
timestamp = {Tue, 03 May 2005 15:05:08 +0200},
biburl = {https://dblp.org/rec/conf/inforsid/Smail99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/kl/nwosuTB96/SimonnotS96,
author = {Brigitte Simonnot and
Malika Sma{\"{\i}}l},
editor = {Kingsley C. Nwosu and
Bhavani Thuraisingham and
P. Bruce Berra},
title = {Model for Interactive Retrieval of Videos and Still Images},
booktitle = {Multimedia Database Systems: Design and Implementation Strategies},
pages = {278--317},
publisher = {1996},
year = {1996},
timestamp = {Tue, 07 Nov 2023 12:00:44 +0100},
biburl = {https://dblp.org/rec/books/kl/nwosuTB96/SimonnotS96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/inforsid/SimonnotS95,
author = {Brigitte Simonnot and
Malika Sma{\"{\i}}l{-}Tabbone},
title = {Mod{\`{e}}le flexible pour la recherche interactive de documents multim{\'{e}}dias},
booktitle = {Actes du XIII{\`{e}}me Congr{\`{e}}s INFORSID, Grenoble, France, May
30 - June 2, 1995},
year = {1995},
timestamp = {Mon, 08 Jun 2020 17:26:56 +0200},
biburl = {https://dblp.org/rec/conf/inforsid/SimonnotS95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwmmdbms/SimonnotS95,
author = {Brigitte Simonnot and
Malika Sma{\"{\i}}l},
title = {Model for Interactive Retrieval of Videos and Still Images},
booktitle = {Proceedings of the International Workshop on Multi-Media Database
Management Systems, {IW-MMDBMS} 1995, August 28-30, 1995, Blue Mountain
Lake, NY, {USA}},
pages = {128--135},
publisher = {{IEEE-CS} Press},
year = {1995},
timestamp = {Wed, 07 Aug 2019 09:11:57 +0200},
biburl = {https://dblp.org/rec/conf/iwmmdbms/SimonnotS95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/riao/SmailC94,
author = {Malika Sma{\"{\i}}l and
Marion Cr{\'{e}}hange},
editor = {Jean{-}Louis Funck{-}Brentano and
Frederick Seitz},
title = {Case-Based Reasoning Meets Information Retrieval},
booktitle = {Computer-Assisted Information Retrieval (Recherche d'Information et
ses Applications) - {RIAO} 1994, 4th International Conference, Rockefeller
University, NY, USA, October 11-13, 1994. Proceedings},
pages = {172--184},
publisher = {{CID}},
year = {1994},
url = {https://dl.acm.org/doi/10.5555/2856823.2856840},
doi = {10.5555/2856823.2856840},
timestamp = {Wed, 04 May 2022 13:02:27 +0200},
biburl = {https://dblp.org/rec/conf/riao/SmailC94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bda/SmailC93,
author = {Malika Sma{\"{\i}}l and
Marion Cr{\'{e}}hange},
editor = {Fran{\c{c}}ois Bry},
title = {Adaption par Cas des Strat{\'{e}}gies de Recherche d'Information},
booktitle = {Neuvi{\`{e}}mes Journ{\'{e}}es Bases de Donn{\'{e}}es Avanc{\'{e}}es,
27-30 Septembre 1993, Toulouse, France (Informal Proceedings)},
pages = {155--174},
publisher = {{INRIA}},
year = {1993},
timestamp = {Fri, 22 Jun 2018 07:11:07 +0200},
biburl = {https://dblp.org/rec/conf/bda/SmailC93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ewcbr/Smail93,
author = {Malika Sma{\"{\i}}l},
editor = {Stefan Wess and
Klaus{-}Dieter Althoff and
Michael M. Richter},
title = {Case-Based Information Retrieval},
booktitle = {Topics in Case-Based Reasoning, First European Workshop, EWCBR-93,
Kaiserslautern, Germany, November 1-5, 1993, Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {837},
pages = {404--413},
publisher = {Springer},
year = {1993},
url = {https://doi.org/10.1007/3-540-58330-0\_103},
doi = {10.1007/3-540-58330-0\_103},
timestamp = {Tue, 14 May 2019 10:00:52 +0200},
biburl = {https://dblp.org/rec/conf/ewcbr/Smail93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bda/FoucautMS91,
author = {Odile Foucaut and
Noureddine Mouaddib and
Malika Sma{\"{\i}}l},
title = {Assistance {\`{a}} la recherche dans une base d'objets complexes nuanc{\'{e}}s},
booktitle = {VII{\`{e}}mes Journ{\'{e}}es Bases de Donn{\'{e}}es Avanc{\'{e}}es,
25-27 Septembre 1991, Lyon, France (Informal Proceedings)},
pages = {429},
publisher = {{INRIA}},
year = {1991},
timestamp = {Sat, 07 Sep 2019 11:59:24 +0200},
biburl = {https://dblp.org/rec/conf/bda/FoucautMS91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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