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ORCIDBibTeX records: Pengyi Yang
@article{DBLP:journals/corr/abs-2401-06823,
author = {Manoj M. Wagle and
Siqu Long and
Carissa Chen and
Chunlei Liu and
Pengyi Yang},
title = {Interpretable deep learning in single-cell omics},
journal = {CoRR},
volume = {abs/2401.06823},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2401.06823},
doi = {10.48550/ARXIV.2401.06823},
eprinttype = {arXiv},
eprint = {2401.06823},
timestamp = {Wed, 07 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2401-06823.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/CaoGYY23,
author = {Yue Cao and
Shila Ghazanfar and
Pengyi Yang and
Jean Y. H. Yang},
title = {Benchmarking of analytical combinations for {COVID-19} outcome prediction
using single-cell {RNA} sequencing data},
journal = {Briefings Bioinform.},
volume = {24},
number = {3},
year = {2023},
url = {https://doi.org/10.1093/bib/bbad159},
doi = {10.1093/BIB/BBAD159},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/CaoGYY23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XiaoKPY22,
author = {Di Xiao and
Hani Jieun Kim and
Ignatius Pang and
Pengyi Yang},
title = {Functional analysis of the stable phosphoproteome reveals cancer vulnerabilities},
journal = {Bioinform.},
volume = {38},
number = {7},
pages = {1956--1963},
year = {2022},
url = {https://doi.org/10.1093/bioinformatics/btac015},
doi = {10.1093/BIOINFORMATICS/BTAC015},
timestamp = {Tue, 28 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XiaoKPY22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CaoLPYY22,
author = {Yue Cao and
Yingxin Lin and
Ellis Patrick and
Pengyi Yang and
Jean Yee Hwa Yang},
title = {scFeatures: multi-view representations of single-cell and spatial
data for disease outcome prediction},
journal = {Bioinform.},
volume = {38},
number = {20},
pages = {4745--4753},
year = {2022},
url = {https://doi.org/10.1093/bioinformatics/btac590},
doi = {10.1093/BIOINFORMATICS/BTAC590},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CaoLPYY22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ncs/KimWCLTLYY21,
author = {Hani Jieun Kim and
Kevin Y. X. Wang and
Carissa Chen and
Yingxin Lin and
Patrick P. L. Tam and
David M. Lin and
Jean Y. H. Yang and
Pengyi Yang},
title = {Uncovering cell identity through differential stability with Cepo},
journal = {Nat. Comput. Sci.},
volume = {1},
number = {12},
pages = {784--790},
year = {2021},
url = {https://doi.org/10.1038/s43588-021-00172-2},
doi = {10.1038/S43588-021-00172-2},
timestamp = {Mon, 15 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ncs/KimWCLTLYY21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2110-14329,
author = {Pengyi Yang and
Hao Huang and
Chunlei Liu},
title = {Feature selection revisited in the single-cell era},
journal = {CoRR},
volume = {abs/2110.14329},
year = {2021},
url = {https://arxiv.org/abs/2110.14329},
eprinttype = {arXiv},
eprint = {2110.14329},
timestamp = {Fri, 29 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2110-14329.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimLGYY20,
author = {Hani Jieun Kim and
Yingxin Lin and
Thomas Andrew Geddes and
Jean Yee Hwa Yang and
Pengyi Yang},
title = {CiteFuse enables multi-modal analysis of CITE-seq data},
journal = {Bioinform.},
volume = {36},
number = {14},
pages = {4137--4143},
year = {2020},
url = {https://doi.org/10.1093/bioinformatics/btaa282},
doi = {10.1093/BIOINFORMATICS/BTAA282},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimLGYY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/CaoGYY20,
author = {Yue Cao and
Thomas Andrew Geddes and
Jean Yee Hwa Yang and
Pengyi Yang},
title = {Ensemble deep learning in bioinformatics},
journal = {Nat. Mach. Intell.},
volume = {2},
number = {9},
pages = {500--508},
year = {2020},
url = {https://doi.org/10.1038/s42256-020-0217-y},
doi = {10.1038/S42256-020-0217-Y},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/natmi/CaoGYY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KimCLWYY19,
author = {Taiyun Kim and
Irene Rui Chen and
Yingxin Lin and
Andy Yi{-}Yang Wang and
Jean Yee Hwa Yang and
Pengyi Yang},
title = {Impact of similarity metrics on single-cell RNA-seq data clustering},
journal = {Briefings Bioinform.},
volume = {20},
number = {6},
pages = {2316--2326},
year = {2019},
url = {https://doi.org/10.1093/bib/bby076},
doi = {10.1093/BIB/BBY076},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KimCLWYY19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GeddesKNBYTY19,
author = {Thomas Andrew Geddes and
Taiyun Kim and
Lihao Nan and
James G. Burchfield and
Jean Yee Hwa Yang and
Dacheng Tao and
Pengyi Yang},
title = {Autoencoder-based cluster ensembles for single-cell RNA-seq data analysis},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {19},
pages = {660},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-3179-5},
doi = {10.1186/S12859-019-3179-5},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GeddesKNBYTY19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CaoLOYYL19,
author = {Yue Cao and
Yingxin Lin and
John T. Ormerod and
Pengyi Yang and
Jean Yee Hwa Yang and
Kitty K. Lo},
title = {scDC: single cell differential composition analysis},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {19},
pages = {721},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-3211-9},
doi = {10.1186/S12859-019-3211-9},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CaoLOYYL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/RidderKYYLHBK19,
author = {Michael de Ridder and
Karsten Klein and
Jean Yee Hwa Yang and
Pengyi Yang and
Jim Lagopoulos and
Ian B. Hickie and
Max Bennett and
Jinman Kim},
title = {An Uncertainty Visual Analytics Framework for fMRI Functional Connectivity},
journal = {Neuroinformatics},
volume = {17},
number = {2},
pages = {211--223},
year = {2019},
url = {https://doi.org/10.1007/s12021-018-9395-8},
doi = {10.1007/S12021-018-9395-8},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ni/RidderKYYLHBK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcyb/YangOLMZY19,
author = {Pengyi Yang and
John T. Ormerod and
Wei Liu and
Chendong Ma and
Albert Y. Zomaya and
Jean Yee Hwa Yang},
title = {AdaSampling for Positive-Unlabeled and Label Noise Learning With Bioinformatics
Applications},
journal = {{IEEE} Trans. Cybern.},
volume = {49},
number = {5},
pages = {1932--1943},
year = {2019},
url = {https://doi.org/10.1109/TCYB.2018.2816984},
doi = {10.1109/TCYB.2018.2816984},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcyb/YangOLMZY19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pdcat/TangWBYYZ19,
author = {Tao Tang and
Hao Wu and
Wei Bao and
Pengyi Yang and
Dong Yuan and
Bing Bing Zhou},
title = {New Parallel Algorithms for All Pairwise Computation on Large {HPC}
Clusters},
booktitle = {20th International Conference on Parallel and Distributed Computing,
Applications and Technologies, {PDCAT} 2019, Gold Coast, Australia,
December 5-7, 2019},
pages = {196--201},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/PDCAT46702.2019.00045},
doi = {10.1109/PDCAT46702.2019.00045},
timestamp = {Wed, 20 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/pdcat/TangWBYYZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangOKYYH17,
author = {Pengyi Yang and
Andrew J. Oldfield and
Taiyun Kim and
Andrian Yang and
Jean Yee Hwa Yang and
Joshua Wing Kei Ho},
title = {Integrative analysis identifies co-dependent gene expression regulation
of {BRG1} and {CHD7} at distal regulatory sites in embryonic stem
cells},
journal = {Bioinform.},
volume = {33},
number = {13},
pages = {1916--1920},
year = {2017},
url = {https://doi.org/10.1093/bioinformatics/btx092},
doi = {10.1093/BIOINFORMATICS/BTX092},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangOKYYH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcai/YangLY17,
author = {Pengyi Yang and
Wei Liu and
Jean Yee Hwa Yang},
editor = {Carles Sierra},
title = {Positive unlabeled learning via wrapper-based adaptive sampling},
booktitle = {Proceedings of the Twenty-Sixth International Joint Conference on
Artificial Intelligence, {IJCAI} 2017, Melbourne, Australia, August
19-25, 2017},
pages = {3273--3279},
publisher = {ijcai.org},
year = {2017},
url = {https://doi.org/10.24963/ijcai.2017/457},
doi = {10.24963/IJCAI.2017/457},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ijcai/YangLY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangHJYJ16,
author = {Pengyi Yang and
Sean J. Humphrey and
David E. James and
Yee Hwa Yang and
Raja Jothi},
title = {Positive-unlabeled ensemble learning for kinase substrate prediction
from dynamic phosphoproteomics data},
journal = {Bioinform.},
volume = {32},
number = {2},
pages = {252--259},
year = {2016},
url = {https://doi.org/10.1093/bioinformatics/btv550},
doi = {10.1093/BIOINFORMATICS/BTV550},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangHJYJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WilkinsHFJPCDJJRLWTMRCRSGSBSTMLLR16,
author = {Katie Wilkins and
Mehedi Hassan and
Margherita Francescatto and
Jakob B. Jespersen and
R. Gonzalo Parra and
Bart Cuypers and
Dan F. DeBlasio and
Alexander Junge and
Anupama Jigisha and
Farzana Rahman and
Griet Laenen and
Sander Willems and
Lieven Thorrez and
Yves Moreau and
Nagarajan Raju and
Sonia P. Chothani and
C. Ramakrishnan and
Masakazu Sekijima and
M. Michael Gromiha and
Paddy J. Slator and
Nigel J. Burroughs and
Przemyslaw Szalaj and
Zhonghui Tang and
Paul J. Michalski and
Oskar Luo and
Xingwang Li and
Yijun Ruan and
Dariusz Plewczynski and
Giulia Fiscon and
Emanuel Weitschek and
Massimo Ciccozzi and
Paola Bertolazzi and
Giovanni Felici and
Pieter Meysman and
Manu Vanaerschot and
Maya Berg and
Hideo Imamura and
Jean{-}Claude Dujardin and
Kris Laukens and
Westa Domanova and
James R. Krycer and
Rima Chaudhuri and
Pengyi Yang and
Fatemeh Vafaee and
Daniel J. Fazakerley and
Sean J. Humphrey and
David E. James and
Zdenka Kuncic},
title = {Highlights from the 11th {ISCB} Student Council Symposium 2015: Dublin,
Ireland. 10 July 2015},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-3}},
year = {2016},
url = {https://doi.org/10.1186/s12859-016-0901-4},
doi = {10.1186/S12859-016-0901-4},
timestamp = {Fri, 08 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WilkinsHFJPCDJJRLWTMRCRSGSBSTMLLR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/candc/LuWZYY16,
author = {Chang Lu and
Jun Wang and
Zili Zhang and
Pengyi Yang and
Guo{-}Xian Yu},
title = {NoisyGOA: Noisy {GO} annotations prediction using taxonomic and semantic
similarity},
journal = {Comput. Biol. Chem.},
volume = {65},
pages = {203--211},
year = {2016},
url = {https://doi.org/10.1016/j.compbiolchem.2016.09.005},
doi = {10.1016/J.COMPBIOLCHEM.2016.09.005},
timestamp = {Wed, 22 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/candc/LuWZYY16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/YangZJHYJ15,
author = {Pengyi Yang and
Xiaofeng Zheng and
Vivek Jayaswal and
Guang Hu and
Jean Yee Hwa Yang and
Raja Jothi},
title = {Knowledge-Based Analysis for Detecting Key Signaling Events from Time-Series
Phosphoproteomics Data},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {8},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004403},
doi = {10.1371/JOURNAL.PCBI.1004403},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/YangZJHYJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangPTFBGPJY14,
author = {Pengyi Yang and
Ellis Patrick and
Shi{-}Xiong Tan and
Daniel J. Fazakerley and
James G. Burchfield and
Christopher Gribben and
Matthew J. Prior and
David E. James and
Yee Hwa Yang},
title = {Direction pathway analysis of large-scale proteomics data reveals
novel features of the insulin action pathway},
journal = {Bioinform.},
volume = {30},
number = {6},
pages = {808--814},
year = {2014},
url = {https://doi.org/10.1093/bioinformatics/btt616},
doi = {10.1093/BIOINFORMATICS/BTT616},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangPTFBGPJY14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcyb/YangYFZZZ14,
author = {Pengyi Yang and
Paul D. Yoo and
Juanita I. Fernando and
Bing Bing Zhou and
Zili Zhang and
Albert Y. Zomaya},
title = {Sample Subset Optimization Techniques for Imbalanced and Ensemble
Learning Problems in Bioinformatics Applications},
journal = {{IEEE} Trans. Cybern.},
volume = {44},
number = {3},
pages = {445--455},
year = {2014},
url = {https://doi.org/10.1109/TCYB.2013.2257480},
doi = {10.1109/TCYB.2013.2257480},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcyb/YangYFZZZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/YangLZCZ13,
author = {Pengyi Yang and
Wei Liu and
Bing Bing Zhou and
Sanjay Chawla and
Albert Y. Zomaya},
editor = {Jian Pei and
Vincent S. Tseng and
Longbing Cao and
Hiroshi Motoda and
Guandong Xu},
title = {Ensemble-Based Wrapper Methods for Feature Selection and Class Imbalance
Learning},
booktitle = {Advances in Knowledge Discovery and Data Mining, 17th Pacific-Asia
Conference, {PAKDD} 2013, Gold Coast, Australia, April 14-17, 2013,
Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {7818},
pages = {544--555},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-37453-1\_45},
doi = {10.1007/978-3-642-37453-1\_45},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/pakdd/YangLZCZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangYY12,
author = {Penghao Wang and
Pengyi Yang and
Jean Yee Hwa Yang},
title = {{OCAP:} an open comprehensive analysis pipeline for iTRAQ},
journal = {Bioinform.},
volume = {28},
number = {10},
pages = {1404--1405},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts150},
doi = {10.1093/BIOINFORMATICS/BTS150},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangYY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/YangMWZZY12,
author = {Pengyi Yang and
Jie Ma and
Penghao Wang and
Yunping Zhu and
Bing Bing Zhou and
Jean Yee Hwa Yang},
title = {Improving X!Tandem on Peptide Identification from Mass Spectrometry
by Self-Boosted Percolator},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {9},
number = {5},
pages = {1273--1280},
year = {2012},
url = {https://doi.org/10.1109/TCBB.2012.86},
doi = {10.1109/TCBB.2012.86},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/YangMWZZY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangHYZ11,
author = {Pengyi Yang and
Joshua Wing Kei Ho and
Jean Yee Hwa Yang and
Bing Bing Zhou},
title = {Gene-gene interaction filtering with ensemble of filters},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S10},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S10},
doi = {10.1186/1471-2105-12-S1-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangHYZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/YangZZZ11,
author = {Pengyi Yang and
Zili Zhang and
Bing Bing Zhou and
Albert Y. Zomaya},
editor = {Joshua Zhexue Huang and
Longbing Cao and
Jaideep Srivastava},
title = {Sample Subset Optimization for Classifying Imbalanced Biological Data},
booktitle = {Advances in Knowledge Discovery and Data Mining - 15th Pacific-Asia
Conference, {PAKDD} 2011, Shenzhen, China, May 24-27, 2011, Proceedings,
Part {II}},
series = {Lecture Notes in Computer Science},
volume = {6635},
pages = {333--344},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-20847-8\_28},
doi = {10.1007/978-3-642-20847-8\_28},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/pakdd/YangZZZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangYAY10,
author = {Penghao Wang and
Pengyi Yang and
Jonathan Arthur and
Jean Yee Hwa Yang},
title = {A dynamic wavelet-based algorithm for pre-processing tandem mass spectrometry
data},
journal = {Bioinform.},
volume = {26},
number = {18},
pages = {2242--2249},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq403},
doi = {10.1093/BIOINFORMATICS/BTQ403},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangYAY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangZZZ10,
author = {Pengyi Yang and
Bing Bing Zhou and
Zili Zhang and
Albert Y. Zomaya},
title = {A multi-filter enhanced genetic ensemble system for gene selection
and sample classification of microarray data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S5},
doi = {10.1186/1471-2105-11-S1-S5},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YangZZZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangHZZ10,
author = {Pengyi Yang and
Joshua Wing Kei Ho and
Albert Y. Zomaya and
Bing Bing Zhou},
title = {A genetic ensemble approach for gene-gene interaction identification},
journal = {{BMC} Bioinform.},
volume = {11},
pages = {524},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-524},
doi = {10.1186/1471-2105-11-524},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangHZZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/YangZZZ10,
author = {Pengyi Yang and
Zili Zhang and
Bing Bing Zhou and
Albert Y. Zomaya},
title = {A clustering based hybrid system for biomarker selection and sample
classification of mass spectrometry data},
journal = {Neurocomputing},
volume = {73},
number = {13-15},
pages = {2317--2331},
year = {2010},
url = {https://doi.org/10.1016/j.neucom.2010.02.022},
doi = {10.1016/J.NEUCOM.2010.02.022},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijon/YangZZZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ksem/LiYOZC10,
author = {Li Li and
Pengyi Yang and
Ling Ou and
Zili Zhang and
Peng Cheng},
editor = {Yaxin Bi and
Mary{-}Anne Williams},
title = {Genetic Algorithm-Based Multi-objective Optimisation for QoS-Aware
Web Services Composition},
booktitle = {Knowledge Science, Engineering and Management, 4th International Conference,
{KSEM} 2010, Belfast, Northern Ireland, UK, September 1-3, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6291},
pages = {549--554},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-15280-1\_50},
doi = {10.1007/978-3-642-15280-1\_50},
timestamp = {Thu, 14 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ksem/LiYOZC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cib/YangZ09,
author = {Pengyi Yang and
Zili Zhang},
title = {An Embedded Two-Layer Feature Selection Approach for Microarray Data
Analysis},
journal = {{IEEE} Intell. Informatics Bull.},
volume = {10},
number = {1},
pages = {24--32},
year = {2009},
url = {http://www.comp.hkbu.edu.hk/\%7Ecib/2009/Dec/article4/iib\_vol10no1\_article4.pdf},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cib/YangZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/expert/ZhangYWZ09,
author = {Zili Zhang and
Pengyi Yang and
Xindong Wu and
Chengqi Zhang},
title = {An Agent-Based Hybrid System for Microarray Data Analysis},
journal = {{IEEE} Intell. Syst.},
volume = {24},
number = {5},
pages = {53--63},
year = {2009},
url = {https://doi.org/10.1109/MIS.2009.92},
doi = {10.1109/MIS.2009.92},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/expert/ZhangYWZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/rskt/YangTXZ09,
author = {Pengyi Yang and
Li Tao and
Liang Xu and
Zili Zhang},
editor = {Peng Wen and
Yuefeng Li and
Lech Polkowski and
Yiyu Yao and
Shusaku Tsumoto and
Guoyin Wang},
title = {Multiagent Framework for Bio-data Mining},
booktitle = {Rough Sets and Knowledge Technology, 4th International Conference,
{RSKT} 2009, Gold Coast, Australia, July 14-16, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5589},
pages = {200--207},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-02962-2\_25},
doi = {10.1007/978-3-642-02962-2\_25},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/rskt/YangTXZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cib/ZhangY08,
author = {Zili Zhang and
Pengyi Yang},
title = {An Ensemble of Classifiers with Genetic Algorithm Based Feature Selection},
journal = {{IEEE} Intell. Informatics Bull.},
volume = {9},
number = {1},
pages = {18--24},
year = {2008},
url = {http://www.comp.hkbu.edu.hk/\%7Ecib/2008/IIB08Nov/feature\_article\_2/DT\_SVM\_MLP.pdf},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cib/ZhangY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bmei/YangZ08,
author = {Pengyi Yang and
Zili Zhang},
title = {A Hybrid Approach to Selecting Susceptible Single Nucleotide Polymorphisms
for Complex Disease Analysis},
booktitle = {Proceedings of the 2008 International Conference on BioMedical Engineering
and Informatics, {BMEI} 2008, May 28-30, 2008, Sanya, Hainan, China
- Volume 1},
pages = {214--218},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/BMEI.2008.344},
doi = {10.1109/BMEI.2008.344},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bmei/YangZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/prib/YangZ08,
author = {Pengyi Yang and
Zili Zhang},
editor = {Madhu Chetty and
Alioune Ngom and
Shandar Ahmad},
title = {A Clustering Based Hybrid System for Mass Spectrometry Data Analysis},
booktitle = {Pattern Recognition in Bioinformatics, Third {IAPR} International
Conference, {PRIB} 2008, Melbourne, Australia, October 15-17, 2008.
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5265},
pages = {98--109},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-88436-1\_9},
doi = {10.1007/978-3-540-88436-1\_9},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/prib/YangZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ausai/YangZ07,
author = {Pengyi Yang and
Zili Zhang},
editor = {Mehmet A. Orgun and
John Thornton},
title = {Hybrid Methods to Select Informative Gene Sets in Microarray Data
Classification},
booktitle = {{AI} 2007: Advances in Artificial Intelligence, 20th Australian Joint
Conference on Artificial Intelligence, Gold Coast, Australia, December
2-6, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4830},
pages = {810--814},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-76928-6\_97},
doi = {10.1007/978-3-540-76928-6\_97},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ausai/YangZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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