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ORCIDYoo-Ah Kim
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- affiliation: University of Connecticut, USA
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Books and Theses
- 2005
[b1]Yoo-Ah Kim:
Algorithms for Data Migration. University of Maryland, College Park, MD, USA, 2005
Journal Articles
- 2017
- [j23]Yoo-Ah Kim, Sanna Madan, Teresa M. Przytycka
:
WeSME: uncovering mutual exclusivity of cancer drivers and beyond. Bioinform. 33(6): 814-821 (2017) - [j22]Phuong Dao, Yoo-Ah Kim, Damian Wójtowicz, Sanna Madan, Roded Sharan, Teresa M. Przytycka:
BeWith: A Between-Within method to discover relationships between cancer modules via integrated analysis of mutual exclusivity, co-occurrence and functional interactions. PLoS Comput. Biol. 13(10) (2017) - 2016
- [j21]Yoo-Ah Kim, Dong-Yeon Cho, Teresa M. Przytycka:
Understanding Genotype-Phenotype Effects in Cancer via Network Approaches. PLoS Comput. Biol. 12(3) (2016) - 2015
- [j20]Yoo-Ah Kim, Dong-Yeon Cho, Phuong Dao, Teresa M. Przytycka:
MEMCover: integrated analysis of mutual exclusivity and functional network reveals dysregulated pathways across multiple cancer types. Bioinform. 31(12): 284-292 (2015) - 2014
- [j19]Wei Zeng, Jordan Cote, Xian Chen, Yoo-Ah Kim, Wei Wei, Kyoungwon Suh, Bing Wang, Zhijie Jerry Shi:
Delay monitoring for wireless sensor networks: An architecture using air sniffers. Ad Hoc Networks 13: 549-559 (2014) - 2012
- [j18]Xian Chen, Yoo-Ah Kim, Bing Wang, Wei Wei, Zhijie Jerry Shi, Yuan Song:
Fault-tolerant monitor placement for out-of-band wireless sensor network monitoring. Ad Hoc Networks 10(1): 62-74 (2012) - [j17]Samir Khuller, Yoo-Ah Kim, Azarakhsh Malekian:
Improved Approximation Algorithms for Data Migration. Algorithmica 63(1-2): 347-362 (2012) - [j16]Xian Chen, Yoo-Ah Kim, Bing Wang, Yuan Song, Hieu Dinh, Guanling Chen:
Sniffer channel selection for monitoring wireless LANs. Comput. Commun. 35(16): 1994-2003 (2012) - [j15]Dong-Yeon Cho, Yoo-Ah Kim, Teresa M. Przytycka:
Chapter 5: Network Biology Approach to Complex Diseases. PLoS Comput. Biol. 8(12) (2012) - [j14]Rajiv Gandhi, Yoo-Ah Kim, Seungjoon Lee, Jiho Ryu, Peng-Jun Wan:
Approximation Algorithms for Data Broadcast in Wireless Networks. IEEE Trans. Mob. Comput. 11(7): 1237-1248 (2012) - 2011
- [j13]Yoo-Ah Kim, Stefan Wuchty, Teresa M. Przytycka:
Identifying Causal Genes and Dysregulated Pathways in Complex Diseases. PLoS Comput. Biol. 7(3) (2011) - 2010
- [j12]Samir Khuller, Yoo-Ah Kim, Yung-Chun (Justin) Wan:
Broadcasting on Networks of Workstations. Algorithmica 57(4): 848-868 (2010) - [j11]Saira Ali Kazmi, Yoo-Ah Kim, Dong-Guk Shin:
Meta analysis algorithms for microarray gene expression data using Gene Regulatory Networks. Int. J. Data Min. Bioinform. 4(5): 487-504 (2010) - 2009
- [j10]Dong-Guk Shin, Saira Ali Kazmi, Baikang Pei, Yoo-Ah Kim, Jeffrey Maddox, Ravi Nori, Alan Wong, Winfried Krueger, David W. Rowe:
Computing Consistency Between Microarray Data and Known Gene Regulation Relationships. IEEE Trans. Inf. Technol. Biomed. 13(6): 1075-1082 (2009) - 2007
- [j9]Samir Khuller, Yoo Ah Kim:
Broadcasting in Heterogeneous Networks. Algorithmica 48(1): 1-21 (2007) - 2006
- [j8]Leana Golubchik, Samir Khuller, Yoo Ah Kim, Svetlana Shargorodskaya, Yung-Chun (Justin) Wan:
Data Migration on Parallel Disks: Algorithms and Evaluation. Algorithmica 45(1): 137-158 (2006) - [j7]Samir Khuller, Yoo Ah Kim, Yung-Chun (Justin) Wan:
On generalized gossiping and broadcasting. J. Algorithms 59(2): 81-106 (2006) - 2005
- [j6]Yoo Ah Kim:
Data migration to minimize the total completion time. J. Algorithms 55(1): 42-57 (2005) - 2004
- [j5]Rajiv Gandhi, Samir Khuller, Yoo Ah Kim, Yung-Chun (Justin) Wan:
Algorithms for Minimizing Response Time in Broadcast Scheduling. Algorithmica 38(4): 597-608 (2004) - [j4]Samir Khuller, Yoo Ah Kim:
Equivalence of two linear programming relaxations for broadcast scheduling. Oper. Res. Lett. 32(5): 473-478 (2004) - [j3]Samir Khuller, Yoo Ah Kim, Yung-Chun (Justin) Wan:
Algorithms for Data Migration with Cloning. SIAM J. Comput. 33(2): 448-461 (2004) - 2003
- [j2]Dong Kyue Kim, Yoo Ah Kim, Kunsoo Park:
Generalizations of suffix arrays to multi-dimensional matrices. Theor. Comput. Sci. 302(1-3): 223-238 (2003) - [j1]Dong Kyue Kim, Yoo Ah Kim, Kunsoo Park:
Generalizations of suffix arrays to multi-dimensional matrices. Theor. Comput. Sci. 302(1-3): 401-416 (2003)
Conference and Workshop Papers
- 2017
- [c24]Phuong Dao, Yoo-Ah Kim, Sanna Madan, Roded Sharan, Teresa M. Przytycka:
BeWith: A Between-Within Method for Module Discovery in Cancer using Integrated Analysis of Mutual Exclusivity, Co-occurrence and Functional Interactions (Extended Abstract). RECOMB 2017: 370-371 - 2016
- [c23]Yoo-Ah Kim, Sanna Madan, Teresa M. Przytycka:
WeSME: Uncovering Mutual Exclusivity of Cancer Mutations. BCB 2016: 466 - 2013
- [c22]Yoo-Ah Kim, Raheleh Salari, Stefan Wuchty, Teresa M. Przytycka:
Module Cover - A New Approach to Genotype-Phenotype Studies. Pacific Symposium on Biocomputing 2013: 135-146 - 2011
- [c21]Chadi Kari, Yoo-Ah Kim, Alexander Russell:
Data Migration in Heterogeneous Storage Systems. ICDCS 2011: 143-150 - 2010
- [c20]Yoo-Ah Kim, Stefan Wuchty, Teresa M. Przytycka:
Simultaneous Identification of Causal Genes and Dys-Regulated Pathways in Complex Diseases. RECOMB 2010: 263-280 - 2009
- [c19]Rajiv Gandhi, Yoo-Ah Kim, Seungjoon Lee, Jiho Ryu, Peng-Jun Wan:
Approximation Algorithms for Data Broadcast in Wireless Networks. INFOCOM 2009: 2681-2685 - [c18]Sixia Chen, Matthew Coolbeth, Hieu Dinh, Yoo-Ah Kim, Bing Wang:
Data Collection with Multiple Sinks in Wireless Sensor Networks. WASA 2009: 284-294 - [c17]Yuan Song, Xian Chen, Yoo-Ah Kim, Bing Wang, Guanling Chen:
Sniffer Channel Selection for Monitoring Wireless LANs. WASA 2009: 489-498 - 2008
- [c16]Saira Ali Kazmi, Yoo-Ah Kim, Baikang Pei, Ravi Nori, David W. Rowe, Hsin-Wei Wang, Alan Wong, Dong-Guk Shin:
Meta Analysis of Microarray Data Using Gene Regulation Pathways. BIBM 2008: 37-42 - 2007
- [c15]Chadi Kari, Yoo Ah Kim, Seungjoon Lee, Alexander Russell, Minho Shin:
Soft Edge Coloring. APPROX-RANDOM 2007: 189-203 - [c14]Hieu Dinh, Yoo Ah Kim, Seungjoon Lee, Minho Shin, Bing Wang:
SDP-based Approach for Channel Assignment in Multi-radio Wireless Networks. DIALM-POMC 2007 - [c13]Shaoyu Yang, Yoo-Ah Kim, Bing Wang:
Designing Infrastructure-Based Overlay Networks for Delay-Sensitive Group Communications. GLOBECOM 2007: 565-570 - 2006
- [c12]Samir Khuller, Yoo Ah Kim, Azarakhsh Malekian:
Improved Algorithms for Data Migration. APPROX-RANDOM 2006: 164-175 - [c11]Dong-Guk Shin, John Bluis, Yoo Ah Kim, Winfried Krueger, Jeffrey Maddox, Ravi Nori, Nathan Viniconis, Hsin-Wei Wang, Alan Wong, David W. Rowe:
A Computational Inference Framework for analyzing Gene Regulation Pathway using Microarray Data. BIBE 2006: 299-306 - [c10]Minho Shin, Seungjoon Lee, Yoo-Ah Kim:
Distributed Channel Assignment for Multi-radio Wireless Networks. MASS 2006: 417-426 - 2005
- [c9]Samir Khuller, Yoo Ah Kim, Yung-Chun (Justin) Wan:
Broadcasting on networks of workstations. SPAA 2005: 279-288 - 2004
- [c8]Samir Khuller, Yoo Ah Kim, Gerhard J. Woeginger:
Approximation Schemes for Broadcasting in Heterogenous Networks. APPROX-RANDOM 2004: 163-170 - [c7]Leana Golubchik, Samir Khuller, Yoo Ah Kim, Svetlana Shargorodskaya, Yung-Chun (Justin) Wan:
Data Migration on Parallel Disks. ESA 2004: 689-701 - [c6]Samir Khuller, Yoo Ah Kim:
On broadcasting in heterogenous networks. SODA 2004: 1011-1020 - 2003
- [c5]Samir Khuller, Yoo Ah Kim, Yung-Chun (Justin) Wan:
On Generalized Gossiping and Broadcasting (Extended Abstract). ESA 2003: 373-384 - [c4]Samir Khuller, Yoo Ah Kim, Yung-Chun (Justin) Wan:
Algorithms for data migration with cloning. PODS 2003: 27-36 - [c3]Yoo Ah Kim:
Data migration to minimize the average completion time. SODA 2003: 97-98 - 2002
- [c2]Rajiv Gandhi, Samir Khuller, Yoo Ah Kim, Yung-Chun (Justin) Wan:
Algorithms for Minimizing Response Time in Broadcast Scheduling. IPCO 2002: 425-438 - 1998
- [c1]Dong Kyue Kim, Yoo Ah Kim, Kunsoo Park:
Constructing Suffix Arrays for Multi-dimensional Matrices. CPM 1998: 126-139
Reference Works
- 2016
- [r3]Yoo-Ah Kim:
Data Migration. Encyclopedia of Algorithms 2016: 487-491 - 2008
- [r2]Yoo Ah Kim:
Data Migration. Encyclopedia of Algorithms 2008 - 2007
- [r1]Samir Khuller, Yung-Chun (Justin) Wan, Yoo-Ah Kim:
Broadcasting on Networks of Workstations. Handbook of Parallel Computing 2007
Informal and Other Publications
- 2016
- [i1]Yoo-Ah Kim, Sanna Madan, Teresa M. Przytycka:
WeSME: Uncovering Mutual Exclusivity of Cancer Drivers and Beyond. CoRR abs/1604.02099 (2016)
Coauthor Index
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