Vladimir Jojic
Zhenghao Chen
Ilya Soifer
Hugo Hilton
Leeat Keren
Vladimir Jojic
Modeling Multiplexed Images with Spatial-LDA Reveals Novel Tissue Microenvironments.
1204-1218
2020
27
J. Comput. Biol.
8
https://doi.org/10.1089/cmb.2019.0340
https://www.wikidata.org/entity/Q91531341
db/journals/jcb/jcb27.html#ChenSHKJ20
Yeu-Chern Harn
Zhenghao Chen
Vladimir Jojic
Composition and decomposition of GANs.
2019
abs/1901.07667
CoRR
http://arxiv.org/abs/1901.07667
db/journals/corr/corr1901.html#abs-1901-07667
Surojit Biswas
Meredith McDonald
Derek S. Lundberg
Jeffery L. Dangl
Vladimir Jojic
Learning Microbial Interaction Networks from Metagenomic Count Data.
526-535
2016
23
J. Comput. Biol.
6
https://doi.org/10.1089/cmb.2016.0061
https://www.wikidata.org/entity/Q36042454
db/journals/jcb/jcb23.html#BiswasMLDJ16
Shan Yang
Vladimir Jojic
Jun Lian
Ronald C. Chen
Hongtu Zhu
Ming C. Lin
Classification of Prostate Cancer Grades and T-Stages Based on Tissue Elasticity Using Medical Image Analysis.
627-635
2016
MICCAI (1)
https://doi.org/10.1007/978-3-319-46720-7_73
conf/miccai/2016-1
db/conf/miccai/miccai2016-1.html#YangJLCZL16
Tianxiang Gao
Vladimir Jojic
Degrees of Freedom in Deep Neural Networks.
2016
UAI
http://auai.org/uai2016/proceedings/papers/257.pdf
conf/uai/2016
db/conf/uai/uai2016.html#GaoJ16
Tianxiang Gao
Vladimir Jojic
Degrees of Freedom in Deep Neural Networks.
2016
abs/1603.09260
CoRR
http://arxiv.org/abs/1603.09260
db/journals/corr/corr1603.html#GaoJ16
Yeu-Chern Harn
M. J. Powers
Elizabeth A. Shank
Vladimir Jojic
Deconvolving molecular signatures of interactions between microbial colonies.
142-150
2015
31
Bioinform.
12
https://doi.org/10.1093/bioinformatics/btv251
https://www.wikidata.org/entity/Q35662986
db/journals/bioinformatics/bioinformatics31.html#HarnPSJ15
Dong Nie
Elizabeth A. Shank
Vladimir Jojic
A deep framework for bacterial image segmentation and classification.
306-314
2015
BCB
https://doi.org/10.1145/2808719.2808751
conf/bcb/2015
db/conf/bcb/bcb2015.html#NieSJ15
Tian Cao 0001
Nikhil Singh 0002
Vladimir Jojic
Marc Niethammer
Semi-coupled dictionary learning for deformation prediction.
691-694
2015
ISBI
https://doi.org/10.1109/ISBI.2015.7163967
conf/isbi/2015
db/conf/isbi/isbi2015.html#CaoSJN15
Tianxiang Gao
Petter Brodin
Mark M. Davis
Vladimir Jojic
Drug-induced mRNA Signatures Are Enriched for the Minority of Genes that Are Highly Heritable.
395-406
2015
Pacific Symposium on Biocomputing
http://psb.stanford.edu/psb-online/proceedings/psb15/gao.pdf
conf/psb/2015
db/conf/psb/psb2015.html#GaoBDJ15
Surojit Biswas
Meredith McDonald
Derek S. Lundberg
Jeffery L. Dangl
Vladimir Jojic
Learning Microbial Interaction Networks from Metagenomic Count Data.
32-43
2015
RECOMB
https://doi.org/10.1007/978-3-319-16706-0_6
conf/recomb/2015
db/conf/recomb/recomb2015.html#BiswasMLDJ15
Enliang Zheng
Enrique Dunn
Vladimir Jojic
Jan-Michael Frahm
PatchMatch Based Joint View Selection and Depthmap Estimation.
1510-1517
2014
CVPR
https://doi.org/10.1109/CVPR.2014.196
https://doi.ieeecomputersociety.org/10.1109/CVPR.2014.196
conf/cvpr/2014
db/conf/cvpr/cvpr2014.html#ZhengDJF14
Chen-Ping Fu
Vladimir Jojic
Leonard McMillan
An Alignment-Free Regression Approach for Estimating Allele-Specific Expression Using RNA-Seq Data.
69-84
2014
RECOMB
https://doi.org/10.1007/978-3-319-05269-4_6
conf/recomb/2014
db/conf/recomb/recomb2014.html#FuJM14
Tian Cao 0001
Vladimir Jojic
Shannon Modla
Debbie Powell
Kirk Czymmek
Marc Niethammer
Robust Multimodal Dictionary Learning.
259-266
2013
MICCAI (1)
https://doi.org/10.1007/978-3-642-40811-3_33
https://www.wikidata.org/entity/Q62498134
conf/miccai/2013-1
db/conf/miccai/miccai2013-1.html#CaoJMPCN13
Surojit Biswas
Vladimir Jojic
AMP: Assembly Matching Pursuit.
175-187
2013
Pacific Symposium on Biocomputing
http://psb.stanford.edu/psb-online/proceedings/psb13/biswas.pdf
conf/psb/2013
db/conf/psb/psb2013.html#BiswasJ13
Eric Yi Liu
Zhishan Guo
Xiang Zhang 0001
Vladimir Jojic
Wei Wang 0010
Metric Learning from Relative Comparisons by Minimizing Squared Residual.
978-983
2012
ICDM
https://doi.org/10.1109/ICDM.2012.38
https://doi.ieeecomputersociety.org/10.1109/ICDM.2012.38
conf/icdm/2012
db/conf/icdm/icdm2012.html#LiuGZJW12
Nebojsa Jojic
Vladimir Jojic
David Heckerman
Joint discovery of haplotype blocks and complex trait associations from SNP sequences
http://arxiv.org/abs/1207.4145
2012
CoRR
abs/1207.4145
db/journals/corr/corr1207.html#abs-1207-4145
Jonathan Laserson
Vladimir Jojic
Daphne Koller
Genovo: De Novo Assembly for Metagenomes.
429-443
2011
18
J. Comput. Biol.
3
https://doi.org/10.1089/cmb.2010.0244
https://www.wikidata.org/entity/Q46842122
db/journals/jcb/jcb18.html#LasersonJK11
Vladimir Jojic
Suchi Saria
Daphne Koller
Convex envelopes of complexity controlling penalties: the case against premature envelopment.
399-406
AISTATS
2011
conf/aistats/2011
http://proceedings.mlr.press/v15/jojic11a/jojic11a.pdf
db/journals/jmlr/jmlrp15.html#JojicSK11
Vladimir Jojic
Stephen Gould
Daphne Koller
Accelerated dual decomposition for MAP inference.
503-510
2010
ICML
https://icml.cc/Conferences/2010/papers/628.pdf
conf/icml/2010
db/conf/icml/icml2010.html#JojicGK10
Jonathan Laserson
Vladimir Jojic
Daphne Koller
Genovo: De Novo Assembly for Metagenomes.
341-356
2010
RECOMB
https://doi.org/10.1007/978-3-642-12683-3_22
conf/recomb/2010
db/conf/recomb/recomb2010.html#LasersonJK10
David C. Nickle
Nebojsa Jojic
David Heckerman
Vladimir Jojic
Darko Kirovski
Morgane Rolland
Sergei L. Kosakovsky Pond
James I. Mullins
Comparison of Immunogen Designs That Optimize Peptide Coverage: Reply to Fischer et al.
2008
4
PLoS Comput. Biol.
1
https://doi.org/10.1371/journal.pcbi.0040025
https://www.wikidata.org/entity/Q42979247
db/journals/ploscb/ploscb4.html#NickleJHJKRPM08
Vladimir Jojic
Tomer Hertz
Nebojsa Jojic
Population Sequencing Using Short Reads: HIV as a Case Study.
114-125
2008
Pacific Symposium on Biocomputing
http://psb.stanford.edu/psb-online/proceedings/psb08/jojic.pdf
conf/psb/2008
db/conf/psb/psb2008.html#JojicHJ08
Delbert Dueck
Brendan J. Frey
Nebojsa Jojic
Vladimir Jojic
Guri Giaever
Andrew Emili
Gabe Musso
Robert Hegele
Constructing Treatment Portfolios Using Affinity Propagation.
360-371
2008
RECOMB
https://doi.org/10.1007/978-3-540-78839-3_31
conf/recomb/2008
db/conf/recomb/recomb2008.html#DueckFJJGEMH08
Vladimir Jojic
Algorithms for rational vaccine design.
University of Toronto, Canada
2007
https://librarysearch.library.utoronto.ca/permalink/01UTORONTO_INST/14bjeso/alma991106595376006196
Nebojsa Jojic
Vladimir Jojic
Brendan J. Frey
Christopher Meek
David Heckerman
Using epitomes to model genetic diversity: Rational design of HIV vaccines.
2005
conf/nips/2005
NIPS
https://proceedings.neurips.cc/paper/2005/hash/6b8b8e3bd6ad94b985c1b1f1b7a94cb2-Abstract.html
http://papers.nips.cc/paper/2895-using-epitomes-to-model-genetic-diversity-rational-design-of-hiv-vaccine-cocktails
db/conf/nips/nips2005.html#JojicJFMH05
587-594
Vladimir Jojic
Nebojsa Jojic
Christopher Meek
Dan Geiger
Adam C. Siepel
David Haussler
David Heckerman
Efficient approximations for learning phylogenetic HMM models from data.
161-168
2004
conf/ismb/2004
ISMB/ECCB (Supplement of Bioinformatics)
https://doi.org/10.1093/bioinformatics/bth917
https://www.wikidata.org/entity/Q30945356
db/conf/ismb/ismb2004.html#JojicJMGSHH04
Nebojsa Jojic
Vladimir Jojic
David Heckerman
Joint Discovery of Haplotype Blocks and Complex Trait Associations from SNP Sequences.
286-292
2004
conf/uai/2004
UAI
https://dslpitt.org/uai/displayArticleDetails.jsp?mmnu=1&smnu=2&article_id=1120&proceeding_id=20
db/conf/uai/uai2004.html#JojicJH04
Surojit Biswas
Petter Brodin
Tian Cao 0001
Ronald C. Chen
Zhenghao Chen
Kirk Czymmek
Jeffery L. Dangl
Mark M. Davis
Delbert Dueck
Enrique Dunn
Andrew Emili
Jan-Michael Frahm
Brendan J. Frey
Chen-Ping Fu
Tianxiang Gao
Dan Geiger
Guri Giaever
Stephen Gould
Zhishan Guo
Yeu-Chern Harn
David Haussler
David Heckerman
Robert Hegele
Tomer Hertz
Hugo Hilton
Nebojsa Jojic
Leeat Keren
Darko Kirovski
Daphne Koller
Jonathan Laserson
Jun Lian
Ming C. Lin
Eric Yi Liu
Derek S. Lundberg
Meredith McDonald
Leonard McMillan
Christopher Meek
Shannon Modla
James I. Mullins
Gabe Musso
David C. Nickle
Dong Nie
Marc Niethammer
Sergei L. Kosakovsky Pond
Debbie Powell
M. J. Powers
Morgane Rolland
Suchi Saria
Elizabeth A. Shank
Adam C. Siepel
Nikhil Singh 0002
Ilya Soifer
Wei Wang 0010
Shan Yang
Xiang Zhang 0001
Enliang Zheng
Hongtu Zhu